Gene annotation
Transcriptome id Sobic.001G391600.1
Synonym Sb01g037120
Functional annotation plant neutral invertase domain containing protein, expressed
UniProt C5X1V5
Pfam PF12899
Panther DB PTHR31916 PTHR31916:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56560 : Plant neutral invertase family protein
RAP-DB (Rice) LOC_Os03g20020.1 : plant neutral invertase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002210
Brachypodium KQK21948 , KQK04222
Barley HORVU4Hr1G052570.11 , HORVU4Hr1G052570.10 , HORVU4Hr1G052570.9 , HORVU4Hr1G052570.8 , HORVU4Hr1G052570.2 , HORVU4Hr1G052570.1 , HORVU4Hr1G052570.3 , HORVU4Hr1G052570.5 , HORVU4Hr1G052570.4 , HORVU4Hr1G052570.7 , HORVU4Hr1G052570.6 , HORVU4Hr1G052750.1
Wheat TraesCS4D02G181200 , TraesCS4B02G179600 , TraesCS4B02G179600 , TraesCS4A02G124800 , TraesCS4A02G124800
Populus PNT05989 , PNT34370 , PNT34371 , PNT05990


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cDNA sequences
Sobic.001G391600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
2 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
3 Sobic.001G105500 heat shock protein DnaJ, putative, expressed -
4 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
5 Sobic.007G019800 expressed protein -
6 Sobic.003G226500 suppressor of G2 allele of SKP1, putative, expressed K12795: SUGT1, suppressor of G2 allele of SKP1
7 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
8 Sobic.002G129000 RING zinc finger protein, putative, expressed -
9 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
10 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
11 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
12 Sobic.009G229200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
13 Sobic.010G184100 mitochondrial carrier protein, putative, expressed -
14 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
15 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
16 Sobic.006G212100 expressed protein -
17 Sobic.009G050700 importin subunit alpha, putative, expressed -
18 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
19 Sobic.004G253000 AGAP000425-PA, putative, expressed K13120: protein FAM32A
20 Sobic.001G054200 green ripe-like, putative, expressed -


Gene co-expression network
sample Sobic001G391600 Sobic001G391600 Sobic009G165800 Sobic009G165800 Sobic001G391600--Sobic009G165800 Sobic010G083700 Sobic010G083700 Sobic001G391600--Sobic010G083700 Sobic001G105500 Sobic001G105500 Sobic001G391600--Sobic001G105500 Sobic009G193400 Sobic009G193400 Sobic001G391600--Sobic009G193400 Sobic007G019800 Sobic007G019800 Sobic001G391600--Sobic007G019800 Sobic003G226500 Sobic003G226500 Sobic001G391600--Sobic003G226500 Sobic004G079100 Sobic004G079100 Sobic001G391600--Sobic004G079100 Sobic002G129000 Sobic002G129000 Sobic001G391600--Sobic002G129000 Sobic004G104900 Sobic004G104900 Sobic001G391600--Sobic004G104900 Sobic001G080700 Sobic001G080700 Sobic009G165800--Sobic001G080700 Sobic001G047400 Sobic001G047400 Sobic009G165800--Sobic001G047400 Sobic006G101700 Sobic006G101700 Sobic009G165800--Sobic006G101700 Sobic002G110700 Sobic002G110700 Sobic009G165800--Sobic002G110700 Sobic003G015900 Sobic003G015900 Sobic009G165800--Sobic003G015900 Sobic009G165800--Sobic010G083700 Sobic010G251000 Sobic010G251000 Sobic009G165800--Sobic010G251000 Sobic004G121100 Sobic004G121100 Sobic009G165800--Sobic004G121100 Sobic003G264200 Sobic003G264200 Sobic009G165800--Sobic003G264200 Sobic006G263900 Sobic006G263900 Sobic010G083700--Sobic006G263900 Sobic010G168600 Sobic010G168600 Sobic010G083700--Sobic010G168600 Sobic001G054200 Sobic001G054200 Sobic010G083700--Sobic001G054200 Sobic001G007200 Sobic001G007200 Sobic010G083700--Sobic001G007200 Sobic009G246950 Sobic009G246950 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G253800 Sobic010G253800 Sobic010G083700--Sobic010G253800 Sobic002G256300 Sobic002G256300 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic001G031600 Sobic001G031600 Sobic001G105500--Sobic001G031600 Sobic009G219000 Sobic009G219000 Sobic001G105500--Sobic009G219000 Sobic001G105500--Sobic009G193400 Sobic002G040700 Sobic002G040700 Sobic001G105500--Sobic002G040700 Sobic001G105500--Sobic001G391600 Sobic001G541100 Sobic001G541100 Sobic001G105500--Sobic001G541100 Sobic006G225600 Sobic006G225600 Sobic001G105500--Sobic006G225600 Sobic009G050700 Sobic009G050700 Sobic001G105500--Sobic009G050700 Sobic001G323000 Sobic001G323000 Sobic001G105500--Sobic001G323000 Sobic009G193400--Sobic003G007500 Sobic003G433100 Sobic003G433100 Sobic009G193400--Sobic003G433100 Sobic009G171700 Sobic009G171700 Sobic009G193400--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G193400--Sobic008G180900 Sobic003G295400 Sobic003G295400 Sobic009G193400--Sobic003G295400 Sobic009G193400--Sobic004G104900 Sobic001G478300 Sobic001G478300 Sobic009G193400--Sobic001G478300 Sobic002G413000 Sobic002G413000 Sobic009G193400--Sobic002G413000 Sobic009G193400--Sobic010G083700 Sobic007G019800--Sobic004G121100 Sobic001G472600 Sobic001G472600 Sobic007G019800--Sobic001G472600 Sobic004G059000 Sobic004G059000 Sobic007G019800--Sobic004G059000 Sobic007G019800--Sobic009G193400 Sobic002G113900 Sobic002G113900 Sobic007G019800--Sobic002G113900 Sobic004G117900 Sobic004G117900 Sobic007G019800--Sobic004G117900 Sobic002G350300 Sobic002G350300 Sobic007G019800--Sobic002G350300 Sobic004G301900 Sobic004G301900 Sobic007G019800--Sobic004G301900 Sobic007G019800--Sobic009G165800 Sobic003G250500 Sobic003G250500 Sobic003G226500--Sobic003G250500 Sobic003G226500--Sobic004G104900 Sobic003G226500--Sobic003G007500 Sobic003G350600 Sobic003G350600 Sobic003G226500--Sobic003G350600 Sobic001G136900 Sobic001G136900 Sobic003G226500--Sobic001G136900 Sobic003G226500--Sobic010G083700 Sobic004G226800 Sobic004G226800 Sobic003G226500--Sobic004G226800 Sobic001G512600 Sobic001G512600 Sobic003G226500--Sobic001G512600 Sobic003G226500--Sobic001G054200 Sobic004G079100--Sobic004G293700 Sobic001G138300 Sobic001G138300 Sobic004G079100--Sobic001G138300 Sobic004G079100--Sobic001G054200 Sobic004G079100--Sobic010G083700 Sobic003G115800 Sobic003G115800 Sobic004G079100--Sobic003G115800 Sobic007G186300 Sobic007G186300 Sobic004G079100--Sobic007G186300 Sobic004G079100--Sobic009G246950 Sobic004G079100--Sobic009G171700 Sobic001G371300 Sobic001G371300 Sobic004G079100--Sobic001G371300 Sobic006G183000 Sobic006G183000 Sobic002G129000--Sobic006G183000 Sobic001G439600 Sobic001G439600 Sobic002G129000--Sobic001G439600 Sobic002G129000--Sobic009G050700 Sobic001G294900 Sobic001G294900 Sobic002G129000--Sobic001G294900 Sobic002G400000 Sobic002G400000 Sobic002G129000--Sobic002G400000 Sobic002G129000--Sobic010G168600 Sobic002G129000--Sobic001G136900 Sobic002G129000--Sobic006G263900 Sobic003G405700 Sobic003G405700 Sobic002G129000--Sobic003G405700 Sobic004G104900--Sobic002G256300 Sobic004G104900--Sobic010G083700 Sobic004G104900--Sobic010G168600 Sobic010G018700 Sobic010G018700 Sobic004G104900--Sobic010G018700 Sobic004G104900--Sobic003G007500 Sobic004G066200 Sobic004G066200 Sobic004G104900--Sobic004G066200 Sobic009G228700 Sobic009G228700 Sobic004G104900--Sobic009G228700 Sobic004G104900--Sobic001G007200 Sobic004G104900--Sobic009G246950
Octagon: transcription factors


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