Gene annotation
Transcriptome id Sobic.003G349300.1
Synonym AME2, FC1, AFC1, Sb03g039230
Functional annotation serine/threonine-protein kinase AFC1, putative, expressed
UniProt A0A1B6Q6X7
Pfam PF07714
Panther DB PTHR24058 PTHR24058:SF44
NCBI CDD -
KEGG Orthology K08287; dual-specificity kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G53570 : FUS3-complementing gene 1
RAP-DB (Rice) LOC_Os01g62080.2 : serine/threonine-protein kinase AFC1, putative, expressed
MaizeGDB (Corn) Zm00025a026942
Brachypodium KQK00562
Barley HORVU6Hr1G053760.5 , HORVU6Hr1G053760.4 , HORVU6Hr1G053760.7 , HORVU6Hr1G053760.6 , HORVU6Hr1G053760.1 , HORVU6Hr1G053760.3 , HORVU6Hr1G053760.2 , HORVU6Hr1G053760.9 , HORVU6Hr1G053760.8 , HORVU6Hr1G061750.24 , HORVU6Hr1G061750.25 , HORVU6Hr1G061750.26 , HORVU6Hr1G061750.27 , HORVU6Hr1G061750.20 , HORVU6Hr1G061750.21 , HORVU6Hr1G061750.22 , HORVU6Hr1G061750.23 , HORVU6Hr1G061750.11 , HORVU6Hr1G061750.10 , HORVU6Hr1G061750.13 , HORVU6Hr1G061750.12 , HORVU6Hr1G061750.15 , HORVU6Hr1G061750.14 , HORVU6Hr1G061750.17 , HORVU6Hr1G061750.16 , HORVU6Hr1G061750.19 , HORVU6Hr1G061750.18 , HORVU6Hr1G053760.55 , HORVU6Hr1G053760.51 , HORVU6Hr1G061750.5 , HORVU6Hr1G061750.4 , HORVU6Hr1G061750.7 , HORVU6Hr1G061750.6 , HORVU6Hr1G061750.1 , HORVU6Hr1G061750.3 , HORVU6Hr1G061750.2 , HORVU6Hr1G061750.9 , HORVU6Hr1G061750.8 , HORVU6Hr1G053760.54 , HORVU6Hr1G053760.57 , HORVU6Hr1G053760.56 , HORVU6Hr1G053760.50 , HORVU6Hr1G053760.53 , HORVU6Hr1G053760.52 , HORVU6Hr1G053760.48 , HORVU6Hr1G053760.49 , HORVU6Hr1G053760.42 , HORVU6Hr1G053760.43 , HORVU6Hr1G053760.40 , HORVU6Hr1G053760.41 , HORVU6Hr1G053760.46 , HORVU6Hr1G053760.47 , HORVU6Hr1G053760.44 , HORVU6Hr1G053760.45 , HORVU6Hr1G053760.39 , HORVU6Hr1G053760.38 , HORVU6Hr1G053760.37 , HORVU6Hr1G053760.36 , HORVU6Hr1G053760.35 , HORVU6Hr1G053760.34 , HORVU6Hr1G053760.33 , HORVU6Hr1G053760.32 , HORVU6Hr1G053760.31 , HORVU6Hr1G053760.30 , HORVU6Hr1G053760.28 , HORVU6Hr1G053760.29 , HORVU6Hr1G053760.24 , HORVU6Hr1G053760.25 , HORVU6Hr1G053760.26 , HORVU6Hr1G053760.27 , HORVU6Hr1G053760.20 , HORVU6Hr1G053760.21 , HORVU6Hr1G053760.22 , HORVU6Hr1G053760.23 , HORVU6Hr1G053760.15 , HORVU6Hr1G053760.16 , HORVU6Hr1G053760.11 , HORVU6Hr1G053760.10 , HORVU6Hr1G053760.13 , HORVU6Hr1G053760.12 , HORVU6Hr1G053760.14 , HORVU6Hr1G053760.17 , HORVU6Hr1G053760.19 , HORVU6Hr1G053760.18
Wheat TraesCS6B02G283400 , TraesCS6D02G223400 , TraesCS6D02G223400 , TraesCS6A02G241200
Populus PNS98488 , PNS98486 , PNS98487 , PNS98485 , PNT32873 , PNT32876 , PNT32877 , PNT32874 , PNT32875


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cDNA sequences
Sobic.003G349300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G205300 secreted salivary protein, putative, expressed -
2 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
3 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
4 Sobic.001G388200 ELMO/CED-12 family protein, putative, expressed -
5 Sobic.004G181900 expressed protein -
6 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
7 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
8 Sobic.003G261400 DUF292 domain containing protein, expressed -
9 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
10 Sobic.006G281800 ras-related protein, putative, expressed K07910: Ras-related protein Rab-18
11 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
12 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
13 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
14 Sobic.004G194900 expressed protein -
15 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
16 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.007G045600 MSP domain containing protein, expressed -
18 Sobic.001G461900 vesicle transport protein GOT1B, putative, expressed -
19 Sobic.004G327300 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
20 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein


Gene co-expression network
sample Sobic003G349300 Sobic003G349300 Sobic010G205300 Sobic010G205300 Sobic003G349300--Sobic010G205300 Sobic001G294900 Sobic001G294900 Sobic003G349300--Sobic001G294900 Sobic009G135600 Sobic009G135600 Sobic003G349300--Sobic009G135600 Sobic001G388200 Sobic001G388200 Sobic003G349300--Sobic001G388200 Sobic004G181900 Sobic004G181900 Sobic003G349300--Sobic004G181900 Sobic009G192000 Sobic009G192000 Sobic003G349300--Sobic009G192000 Sobic001G283200 Sobic001G283200 Sobic003G349300--Sobic001G283200 Sobic003G261400 Sobic003G261400 Sobic003G349300--Sobic003G261400 Sobic007G168600 Sobic007G168600 Sobic003G349300--Sobic007G168600 Sobic004G232800 Sobic004G232800 Sobic010G205300--Sobic004G232800 Sobic010G205300--Sobic003G349300 Sobic010G205300--Sobic007G168600 Sobic001G502200 Sobic001G502200 Sobic010G205300--Sobic001G502200 Sobic002G281300 Sobic002G281300 Sobic010G205300--Sobic002G281300 Sobic004G356900 Sobic004G356900 Sobic010G205300--Sobic004G356900 Sobic010G205300--Sobic003G261400 Sobic004G194900 Sobic004G194900 Sobic010G205300--Sobic004G194900 Sobic001G067900 Sobic001G067900 Sobic010G205300--Sobic001G067900 Sobic008G137600 Sobic008G137600 Sobic001G294900--Sobic008G137600 Sobic001G294900--Sobic003G349300 Sobic006G225300 Sobic006G225300 Sobic001G294900--Sobic006G225300 Sobic001G439600 Sobic001G439600 Sobic001G294900--Sobic001G439600 Sobic006G183000 Sobic006G183000 Sobic001G294900--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic001G294900--Sobic002G129000 Sobic001G458700 Sobic001G458700 Sobic001G294900--Sobic001G458700 Sobic001G294900--Sobic009G135600 Sobic006G109700 Sobic006G109700 Sobic001G294900--Sobic006G109700 Sobic001G461900 Sobic001G461900 Sobic009G135600--Sobic001G461900 Sobic009G135600--Sobic003G349300 Sobic009G146100 Sobic009G146100 Sobic009G135600--Sobic009G146100 Sobic001G433400 Sobic001G433400 Sobic009G135600--Sobic001G433400 Sobic002G385900 Sobic002G385900 Sobic009G135600--Sobic002G385900 Sobic009G135600--Sobic001G388200 Sobic002G400000 Sobic002G400000 Sobic009G135600--Sobic002G400000 Sobic009G135600--Sobic001G294900 Sobic001G054200 Sobic001G054200 Sobic009G135600--Sobic001G054200 Sobic001G388200--Sobic003G349300 Sobic006G232200 Sobic006G232200 Sobic001G388200--Sobic006G232200 Sobic001G388200--Sobic009G135600 Sobic010G083700 Sobic010G083700 Sobic001G388200--Sobic010G083700 Sobic001G388200--Sobic002G281300 Sobic001G388200--Sobic001G054200 Sobic010G000900 Sobic010G000900 Sobic001G388200--Sobic010G000900 Sobic001G314500 Sobic001G314500 Sobic001G388200--Sobic001G314500 Sobic001G388200--Sobic003G261400 Sobic001G206900 Sobic001G206900 Sobic004G181900--Sobic001G206900 Sobic004G181900--Sobic003G349300 Sobic004G181900--Sobic001G283200 Sobic004G181900--Sobic010G205300 Sobic006G281800 Sobic006G281800 Sobic004G181900--Sobic006G281800 Sobic009G225000 Sobic009G225000 Sobic004G181900--Sobic009G225000 Sobic004G348900 Sobic004G348900 Sobic004G181900--Sobic004G348900 Sobic009G149500 Sobic009G149500 Sobic004G181900--Sobic009G149500 Sobic001G085100 Sobic001G085100 Sobic004G181900--Sobic001G085100 Sobic001G031100 Sobic001G031100 Sobic009G192000--Sobic001G031100 Sobic007G167900 Sobic007G167900 Sobic009G192000--Sobic007G167900 Sobic010G020400 Sobic010G020400 Sobic009G192000--Sobic010G020400 Sobic009G192000--Sobic003G349300 Sobic001G014800 Sobic001G014800 Sobic009G192000--Sobic001G014800 Sobic003G338500 Sobic003G338500 Sobic009G192000--Sobic003G338500 Sobic006G180000 Sobic006G180000 Sobic009G192000--Sobic006G180000 Sobic009G192000--Sobic010G205300 Sobic003G374000 Sobic003G374000 Sobic009G192000--Sobic003G374000 Sobic001G283200--Sobic001G458700 Sobic001G283200--Sobic003G261400 Sobic006G252200 Sobic006G252200 Sobic001G283200--Sobic006G252200 Sobic001G033500 Sobic001G033500 Sobic001G283200--Sobic001G033500 Sobic001G283200--Sobic004G348900 Sobic001G283200--Sobic004G181900 Sobic001G283200--Sobic003G349300 Sobic007G176200 Sobic007G176200 Sobic001G283200--Sobic007G176200 Sobic004G082900 Sobic004G082900 Sobic001G283200--Sobic004G082900 Sobic003G261400--Sobic001G283200 Sobic003G261400--Sobic002G281300 Sobic003G261500 Sobic003G261500 Sobic003G261400--Sobic003G261500 Sobic007G045600 Sobic007G045600 Sobic003G261400--Sobic007G045600 Sobic003G261400--Sobic001G458700 Sobic004G130900 Sobic004G130900 Sobic003G261400--Sobic004G130900 Sobic003G124800 Sobic003G124800 Sobic003G261400--Sobic003G124800 Sobic001G051200 Sobic001G051200 Sobic003G261400--Sobic001G051200 Sobic003G261400--Sobic010G000900 Sobic007G168600--Sobic002G400000 Sobic009G198500 Sobic009G198500 Sobic007G168600--Sobic009G198500 Sobic004G086600 Sobic004G086600 Sobic007G168600--Sobic004G086600 Sobic007G168600--Sobic001G502200 Sobic003G077900 Sobic003G077900 Sobic007G168600--Sobic003G077900 Sobic007G168600--Sobic010G205300 Sobic007G168600--Sobic003G124800 Sobic007G168600--Sobic001G461900 Sobic007G168600--Sobic001G314500
Octagon: transcription factors


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