Gene annotation
Transcriptome id Sobic.004G289800.1
Synonym Sb04g032490
Functional annotation expressed protein
UniProt C5Y1E6
Pfam -
Panther DB PTHR35459 PTHR35459:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01730 : -
RAP-DB (Rice) LOC_Os02g44540.1 : expressed protein
MaizeGDB (Corn) Zm00025a032245 , Zm00025a021436
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G045600 MSP domain containing protein, expressed -
2 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
3 Sobic.001G461900 vesicle transport protein GOT1B, putative, expressed -
4 Sobic.010G188200 SFT2, putative, expressed -
5 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
6 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
7 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
8 Sobic.001G054200 green ripe-like, putative, expressed -
9 Sobic.007G142500 EF hand family protein, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
10 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
11 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
12 Sobic.006G049700 SAM domain family protein, expressed -
13 Sobic.001G460600 RING zinc finger protein-like, putative, expressed -
14 Sobic.004G086600 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
15 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
16 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
17 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
18 Sobic.001G459500 leucine rich repeat containing protein, expressed -
19 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
20 Sobic.002G385900 DCN1, putative, expressed K17822: DCN1-like protein 1/2


Gene co-expression network
sample Sobic004G289800 Sobic004G289800 Sobic007G045600 Sobic007G045600 Sobic004G289800--Sobic007G045600 Sobic009G135600 Sobic009G135600 Sobic004G289800--Sobic009G135600 Sobic001G461900 Sobic001G461900 Sobic004G289800--Sobic001G461900 Sobic010G188200 Sobic010G188200 Sobic004G289800--Sobic010G188200 Sobic003G349300 Sobic003G349300 Sobic004G289800--Sobic003G349300 Sobic001G294900 Sobic001G294900 Sobic004G289800--Sobic001G294900 Sobic006G263900 Sobic006G263900 Sobic004G289800--Sobic006G263900 Sobic001G054200 Sobic001G054200 Sobic004G289800--Sobic001G054200 Sobic007G142500 Sobic007G142500 Sobic004G289800--Sobic007G142500 Sobic007G114200 Sobic007G114200 Sobic007G045600--Sobic007G114200 Sobic007G019100 Sobic007G019100 Sobic007G045600--Sobic007G019100 Sobic003G124800 Sobic003G124800 Sobic007G045600--Sobic003G124800 Sobic006G232200 Sobic006G232200 Sobic007G045600--Sobic006G232200 Sobic003G261400 Sobic003G261400 Sobic007G045600--Sobic003G261400 Sobic007G045600--Sobic007G142500 Sobic004G086600 Sobic004G086600 Sobic007G045600--Sobic004G086600 Sobic007G045600--Sobic001G461900 Sobic007G118000 Sobic007G118000 Sobic007G045600--Sobic007G118000 Sobic009G135600--Sobic001G461900 Sobic009G135600--Sobic003G349300 Sobic009G146100 Sobic009G146100 Sobic009G135600--Sobic009G146100 Sobic001G433400 Sobic001G433400 Sobic009G135600--Sobic001G433400 Sobic002G385900 Sobic002G385900 Sobic009G135600--Sobic002G385900 Sobic001G388200 Sobic001G388200 Sobic009G135600--Sobic001G388200 Sobic002G400000 Sobic002G400000 Sobic009G135600--Sobic002G400000 Sobic009G135600--Sobic001G294900 Sobic009G135600--Sobic001G054200 Sobic001G461900--Sobic009G135600 Sobic001G461900--Sobic007G045600 Sobic001G461900--Sobic009G146100 Sobic004G327300 Sobic004G327300 Sobic001G461900--Sobic004G327300 Sobic001G461900--Sobic007G142500 Sobic007G168600 Sobic007G168600 Sobic001G461900--Sobic007G168600 Sobic001G461900--Sobic004G086600 Sobic004G335000 Sobic004G335000 Sobic001G461900--Sobic004G335000 Sobic007G096700 Sobic007G096700 Sobic001G461900--Sobic007G096700 Sobic001G459500 Sobic001G459500 Sobic010G188200--Sobic001G459500 Sobic010G188200--Sobic007G045600 Sobic010G188200--Sobic007G142500 Sobic010G188200--Sobic001G461900 Sobic010G188200--Sobic004G289800 Sobic010G188200--Sobic009G135600 Sobic001G512400 Sobic001G512400 Sobic010G188200--Sobic001G512400 Sobic010G188200--Sobic007G118000 Sobic002G281300 Sobic002G281300 Sobic010G188200--Sobic002G281300 Sobic010G205300 Sobic010G205300 Sobic003G349300--Sobic010G205300 Sobic003G349300--Sobic001G294900 Sobic003G349300--Sobic009G135600 Sobic003G349300--Sobic001G388200 Sobic004G181900 Sobic004G181900 Sobic003G349300--Sobic004G181900 Sobic009G192000 Sobic009G192000 Sobic003G349300--Sobic009G192000 Sobic001G283200 Sobic001G283200 Sobic003G349300--Sobic001G283200 Sobic003G349300--Sobic003G261400 Sobic003G349300--Sobic007G168600 Sobic008G137600 Sobic008G137600 Sobic001G294900--Sobic008G137600 Sobic001G294900--Sobic003G349300 Sobic006G225300 Sobic006G225300 Sobic001G294900--Sobic006G225300 Sobic001G439600 Sobic001G439600 Sobic001G294900--Sobic001G439600 Sobic006G183000 Sobic006G183000 Sobic001G294900--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic001G294900--Sobic002G129000 Sobic001G458700 Sobic001G458700 Sobic001G294900--Sobic001G458700 Sobic001G294900--Sobic009G135600 Sobic006G109700 Sobic006G109700 Sobic001G294900--Sobic006G109700 Sobic010G083700 Sobic010G083700 Sobic006G263900--Sobic010G083700 Sobic006G263900--Sobic001G054200 Sobic010G168600 Sobic010G168600 Sobic006G263900--Sobic010G168600 Sobic001G395400 Sobic001G395400 Sobic006G263900--Sobic001G395400 Sobic001G078500 Sobic001G078500 Sobic006G263900--Sobic001G078500 Sobic006G212100 Sobic006G212100 Sobic006G263900--Sobic006G212100 Sobic010G253800 Sobic010G253800 Sobic006G263900--Sobic010G253800 Sobic009G246950 Sobic009G246950 Sobic006G263900--Sobic009G246950 Sobic003G007500 Sobic003G007500 Sobic006G263900--Sobic003G007500 Sobic001G054200--Sobic010G083700 Sobic001G054200--Sobic006G263900 Sobic001G054200--Sobic006G212100 Sobic007G186300 Sobic007G186300 Sobic001G054200--Sobic007G186300 Sobic004G293700 Sobic004G293700 Sobic001G054200--Sobic004G293700 Sobic001G054200--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic001G054200--Sobic004G079100 Sobic001G054200--Sobic006G232200 Sobic003G115800 Sobic003G115800 Sobic001G054200--Sobic003G115800 Sobic007G142500--Sobic007G045600 Sobic007G142500--Sobic001G458700 Sobic007G142500--Sobic001G461900 Sobic007G142500--Sobic003G261400 Sobic003G323600 Sobic003G323600 Sobic007G142500--Sobic003G323600 Sobic007G176200 Sobic007G176200 Sobic007G142500--Sobic007G176200 Sobic009G088100 Sobic009G088100 Sobic007G142500--Sobic009G088100 Sobic007G142500--Sobic004G335000 Sobic007G142500--Sobic002G281300
Octagon: transcription factors


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