Gene annotation
Transcriptome id Sobic.007G019100.1
Synonym Sb07g001630, RPS10
Functional annotation mitochondrial ribosomal protein S10, putative, expressed
UniProt C5YMC6
Pfam PF00338
Panther DB PTHR11700 PTHR11700:SF7
NCBI CDD -
KEGG Orthology K02946; RP-S10, MRPS10, small subunit ribosomal protein S10
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT3G22300 : ribosomal protein S10
RAP-DB (Rice) LOC_Os12g33240.2 : mitochondrial ribosomal protein S10, putative, expressed
MaizeGDB (Corn) Zm00025a008075 , Zm00025a016846
Brachypodium KQJ83631
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G019100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G045600 MSP domain containing protein, expressed -
2 Sobic.001G132100 expressed protein -
3 Sobic.003G323600 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
4 Sobic.009G119900 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
5 Sobic.001G048832 - -
6 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
7 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
8 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
9 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
10 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
11 Sobic.010G154700 - -
12 Sobic.001G461900 vesicle transport protein GOT1B, putative, expressed -
13 Sobic.004G286100 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
14 Sobic.001G491100 structural constituent of ribosome, putative, expressed K02911: RP-L32, MRPL32, large subunit ribosomal protein L32
15 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
16 Sobic.004G334800 vacuolar protein sorting 55 family protein, putative, expressed -
17 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
18 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
19 Sobic.008G161800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
20 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1


Gene co-expression network
sample Sobic007G019100 Sobic007G019100 Sobic007G045600 Sobic007G045600 Sobic007G019100--Sobic007G045600 Sobic001G132100 Sobic001G132100 Sobic007G019100--Sobic001G132100 Sobic003G323600 Sobic003G323600 Sobic007G019100--Sobic003G323600 Sobic009G119900 Sobic009G119900 Sobic007G019100--Sobic009G119900 Sobic001G048832 Sobic001G048832 Sobic007G019100--Sobic001G048832 Sobic004G170400 Sobic004G170400 Sobic007G019100--Sobic004G170400 Sobic007G114200 Sobic007G114200 Sobic007G019100--Sobic007G114200 Sobic001G074700 Sobic001G074700 Sobic007G019100--Sobic001G074700 Sobic001G342200 Sobic001G342200 Sobic007G019100--Sobic001G342200 Sobic007G045600--Sobic007G114200 Sobic007G045600--Sobic007G019100 Sobic003G124800 Sobic003G124800 Sobic007G045600--Sobic003G124800 Sobic006G232200 Sobic006G232200 Sobic007G045600--Sobic006G232200 Sobic003G261400 Sobic003G261400 Sobic007G045600--Sobic003G261400 Sobic007G142500 Sobic007G142500 Sobic007G045600--Sobic007G142500 Sobic004G086600 Sobic004G086600 Sobic007G045600--Sobic004G086600 Sobic001G461900 Sobic001G461900 Sobic007G045600--Sobic001G461900 Sobic007G118000 Sobic007G118000 Sobic007G045600--Sobic007G118000 Sobic001G132100--Sobic001G048832 Sobic010G154700 Sobic010G154700 Sobic001G132100--Sobic010G154700 Sobic002G190900 Sobic002G190900 Sobic001G132100--Sobic002G190900 Sobic005G188100 Sobic005G188100 Sobic001G132100--Sobic005G188100 Sobic007G051000 Sobic007G051000 Sobic001G132100--Sobic007G051000 Sobic002G398901 Sobic002G398901 Sobic001G132100--Sobic002G398901 Sobic001G132100--Sobic009G119900 Sobic010G018400 Sobic010G018400 Sobic001G132100--Sobic010G018400 Sobic004G272800 Sobic004G272800 Sobic001G132100--Sobic004G272800 Sobic003G323600--Sobic007G045600 Sobic003G323600--Sobic007G019100 Sobic003G323600--Sobic006G232200 Sobic001G459500 Sobic001G459500 Sobic003G323600--Sobic001G459500 Sobic003G367451 Sobic003G367451 Sobic003G323600--Sobic003G367451 Sobic003G323600--Sobic007G142500 Sobic003G323600--Sobic001G132100 Sobic001G236300 Sobic001G236300 Sobic003G323600--Sobic001G236300 Sobic003G323600--Sobic001G048832 Sobic002G356400 Sobic002G356400 Sobic009G119900--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic009G119900--Sobic003G209000 Sobic004G310300 Sobic004G310300 Sobic009G119900--Sobic004G310300 Sobic009G119900--Sobic004G170400 Sobic004G259200 Sobic004G259200 Sobic009G119900--Sobic004G259200 Sobic009G119900--Sobic007G051000 Sobic001G172000 Sobic001G172000 Sobic009G119900--Sobic001G172000 Sobic006G083500 Sobic006G083500 Sobic009G119900--Sobic006G083500 Sobic009G119900--Sobic010G154700 Sobic001G048832--Sobic010G154700 Sobic001G048832--Sobic001G132100 Sobic001G048832--Sobic007G051000 Sobic009G176000 Sobic009G176000 Sobic001G048832--Sobic009G176000 Sobic001G048832--Sobic005G188100 Sobic001G048832--Sobic002G190900 Sobic001G048832--Sobic009G119900 Sobic001G048832--Sobic004G272800 Sobic001G048832--Sobic002G398901 Sobic001G350600 Sobic001G350600 Sobic004G170400--Sobic001G350600 Sobic004G170400--Sobic004G259200 Sobic004G170400--Sobic001G074700 Sobic001G465800 Sobic001G465800 Sobic004G170400--Sobic001G465800 Sobic004G170400--Sobic009G119900 Sobic004G170400--Sobic002G356400 Sobic004G170400--Sobic003G209000 Sobic004G170400--Sobic004G310300 Sobic002G418400 Sobic002G418400 Sobic004G170400--Sobic002G418400 Sobic007G114200--Sobic007G045600 Sobic007G114200--Sobic003G367451 Sobic007G114200--Sobic001G236300 Sobic009G001400 Sobic009G001400 Sobic007G114200--Sobic009G001400 Sobic002G428200 Sobic002G428200 Sobic007G114200--Sobic002G428200 Sobic006G252200 Sobic006G252200 Sobic007G114200--Sobic006G252200 Sobic002G214900 Sobic002G214900 Sobic007G114200--Sobic002G214900 Sobic004G327300 Sobic004G327300 Sobic007G114200--Sobic004G327300 Sobic004G138800 Sobic004G138800 Sobic007G114200--Sobic004G138800 Sobic001G074700--Sobic004G170400 Sobic001G074700--Sobic001G350600 Sobic001G074700--Sobic004G259200 Sobic002G309700 Sobic002G309700 Sobic001G074700--Sobic002G309700 Sobic001G074700--Sobic010G154700 Sobic002G296200 Sobic002G296200 Sobic001G074700--Sobic002G296200 Sobic001G074700--Sobic009G119900 Sobic001G047800 Sobic001G047800 Sobic001G074700--Sobic001G047800 Sobic001G074700--Sobic002G418400 Sobic001G057300 Sobic001G057300 Sobic001G342200--Sobic001G057300 Sobic001G060300 Sobic001G060300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic007G092100 Sobic007G092100 Sobic001G342200--Sobic007G092100 Sobic010G008800 Sobic010G008800 Sobic001G342200--Sobic010G008800 Sobic001G342200--Sobic004G170400 Sobic001G342200--Sobic001G074700 Sobic001G031900 Sobic001G031900 Sobic001G342200--Sobic001G031900
Octagon: transcription factors


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