Gene annotation
Transcriptome id Sobic.001G323300.1
Synonym Sb01g031335
Functional annotation ethylene-responsive element-binding protein, putative, expressed
UniProt A0A1B6QMB2
Pfam PF05903
Panther DB PTHR12378 PTHR12378:SF4
NCBI CDD KOG0324; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47740 : PPPDE putative thiol peptidase family protein
RAP-DB (Rice) LOC_Os03g10200.1 : ethylene-responsive element-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a053635
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
2 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
3 Sobic.007G045600 MSP domain containing protein, expressed -
4 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
5 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
6 Sobic.005G086500 clathrin adaptor complex small chain domain containing protein, expressed K11827: AP-2 complex subunit sigma-1
7 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
8 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
9 Sobic.002G157100 co-chaperone GrpE protein, putative, expressed K03687: molecular chaperone GrpE
10 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
11 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
12 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
13 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
14 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
15 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
16 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
17 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5
18 Sobic.001G089500 RNA recognition motif containing protein, putative, expressed -
19 Sobic.008G073300 clathrin adaptor complex small chain domain containing protein, expressed K11827: AP-2 complex subunit sigma-1
20 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic001G323300 Sobic001G323300 Sobic001G458700 Sobic001G458700 Sobic001G323300--Sobic001G458700 Sobic007G118000 Sobic007G118000 Sobic001G323300--Sobic007G118000 Sobic007G045600 Sobic007G045600 Sobic001G323300--Sobic007G045600 Sobic004G344800 Sobic004G344800 Sobic001G323300--Sobic004G344800 Sobic001G031900 Sobic001G031900 Sobic001G323300--Sobic001G031900 Sobic005G086500 Sobic005G086500 Sobic001G323300--Sobic005G086500 Sobic007G176200 Sobic007G176200 Sobic001G323300--Sobic007G176200 Sobic004G030000 Sobic004G030000 Sobic001G323300--Sobic004G030000 Sobic002G157100 Sobic002G157100 Sobic001G323300--Sobic002G157100 Sobic001G458700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G458700--Sobic006G252200 Sobic001G010700 Sobic001G010700 Sobic001G458700--Sobic001G010700 Sobic002G341800 Sobic002G341800 Sobic001G458700--Sobic002G341800 Sobic004G224900 Sobic004G224900 Sobic001G458700--Sobic004G224900 Sobic003G330500 Sobic003G330500 Sobic001G458700--Sobic003G330500 Sobic001G283200 Sobic001G283200 Sobic001G458700--Sobic001G283200 Sobic001G502200 Sobic001G502200 Sobic001G458700--Sobic001G502200 Sobic004G081800 Sobic004G081800 Sobic001G458700--Sobic004G081800 Sobic007G118000--Sobic007G045600 Sobic001G033500 Sobic001G033500 Sobic007G118000--Sobic001G033500 Sobic001G402300 Sobic001G402300 Sobic007G118000--Sobic001G402300 Sobic003G374000 Sobic003G374000 Sobic007G118000--Sobic003G374000 Sobic004G072800 Sobic004G072800 Sobic007G118000--Sobic004G072800 Sobic002G281300 Sobic002G281300 Sobic007G118000--Sobic002G281300 Sobic001G067900 Sobic001G067900 Sobic007G118000--Sobic001G067900 Sobic004G141700 Sobic004G141700 Sobic007G118000--Sobic004G141700 Sobic007G118000--Sobic001G323300 Sobic007G114200 Sobic007G114200 Sobic007G045600--Sobic007G114200 Sobic007G019100 Sobic007G019100 Sobic007G045600--Sobic007G019100 Sobic003G124800 Sobic003G124800 Sobic007G045600--Sobic003G124800 Sobic006G232200 Sobic006G232200 Sobic007G045600--Sobic006G232200 Sobic003G261400 Sobic003G261400 Sobic007G045600--Sobic003G261400 Sobic007G142500 Sobic007G142500 Sobic007G045600--Sobic007G142500 Sobic004G086600 Sobic004G086600 Sobic007G045600--Sobic004G086600 Sobic001G461900 Sobic001G461900 Sobic007G045600--Sobic001G461900 Sobic007G045600--Sobic007G118000 Sobic001G073600 Sobic001G073600 Sobic004G344800--Sobic001G073600 Sobic003G135600 Sobic003G135600 Sobic004G344800--Sobic003G135600 Sobic004G159000 Sobic004G159000 Sobic004G344800--Sobic004G159000 Sobic001G035400 Sobic001G035400 Sobic004G344800--Sobic001G035400 Sobic009G191400 Sobic009G191400 Sobic004G344800--Sobic009G191400 Sobic004G344800--Sobic004G030000 Sobic002G262200 Sobic002G262200 Sobic004G344800--Sobic002G262200 Sobic002G396700 Sobic002G396700 Sobic004G344800--Sobic002G396700 Sobic004G344800--Sobic001G031900 Sobic006G058900 Sobic006G058900 Sobic001G031900--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic001G031900--Sobic004G202100 Sobic002G395000 Sobic002G395000 Sobic001G031900--Sobic002G395000 Sobic001G350600 Sobic001G350600 Sobic001G031900--Sobic001G350600 Sobic001G031900--Sobic004G344800 Sobic003G152900 Sobic003G152900 Sobic001G031900--Sobic003G152900 Sobic004G170400 Sobic004G170400 Sobic001G031900--Sobic004G170400 Sobic001G458800 Sobic001G458800 Sobic001G031900--Sobic001G458800 Sobic001G031900--Sobic004G030000 Sobic005G086500--Sobic001G067900 Sobic005G086500--Sobic001G323300 Sobic005G086500--Sobic007G045600 Sobic005G086500--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic005G086500--Sobic001G522900 Sobic004G103600 Sobic004G103600 Sobic005G086500--Sobic004G103600 Sobic005G086500--Sobic007G142500 Sobic005G086500--Sobic001G458700 Sobic010G188200 Sobic010G188200 Sobic005G086500--Sobic010G188200 Sobic007G176200--Sobic001G458700 Sobic007G176200--Sobic001G010700 Sobic007G176200--Sobic006G252200 Sobic007G176200--Sobic003G330500 Sobic007G176200--Sobic004G224900 Sobic002G428200 Sobic002G428200 Sobic007G176200--Sobic002G428200 Sobic004G335000 Sobic004G335000 Sobic007G176200--Sobic004G335000 Sobic007G176200--Sobic002G341800 Sobic009G067000 Sobic009G067000 Sobic007G176200--Sobic009G067000 Sobic004G030000--Sobic003G152900 Sobic004G030000--Sobic001G350600 Sobic001G465800 Sobic001G465800 Sobic004G030000--Sobic001G465800 Sobic002G309700 Sobic002G309700 Sobic004G030000--Sobic002G309700 Sobic001G074700 Sobic001G074700 Sobic004G030000--Sobic001G074700 Sobic004G030000--Sobic004G170400 Sobic010G007400 Sobic010G007400 Sobic004G030000--Sobic010G007400 Sobic004G030000--Sobic004G344800 Sobic004G030000--Sobic004G159000 Sobic007G220900 Sobic007G220900 Sobic002G157100--Sobic007G220900 Sobic002G157100--Sobic001G323300 Sobic002G157100--Sobic004G030000 Sobic001G342200 Sobic001G342200 Sobic002G157100--Sobic001G342200 Sobic001G057300 Sobic001G057300 Sobic002G157100--Sobic001G057300 Sobic008G130400 Sobic008G130400 Sobic002G157100--Sobic008G130400 Sobic001G030300 Sobic001G030300 Sobic002G157100--Sobic001G030300 Sobic009G104100 Sobic009G104100 Sobic002G157100--Sobic009G104100 Sobic002G157100--Sobic001G350600
Octagon: transcription factors


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