Gene annotation
Transcriptome id Sobic.002G157100.1
Synonym AR192, Sb02g019590
Functional annotation co-chaperone GrpE protein, putative, expressed
UniProt C5X8B2
Pfam PF01025
Panther DB PTHR21237 PTHR21237:SF28
NCBI CDD KOG3003; Molecular chaperone of the GrpE family
KEGG Orthology K03687; molecular chaperone GrpE
Gene Ontology GO:0006457; protein folding GO:0000774adenyl-nucleotide exchange factor activity


Orthologs (automatic annotation)
TAIR AT5G55200 : Co-chaperone GrpE family protein
RAP-DB (Rice) LOC_Os09g11250.1 : co-chaperone GrpE protein, putative, expressed
MaizeGDB (Corn) Zm00025a013653 , Zm00025a030776
Brachypodium PNT64298 , PNT64297 , KQJ89704
Barley HORVU5Hr1G053680.5 , HORVU5Hr1G053680.4 , HORVU5Hr1G053680.7 , HORVU5Hr1G053680.6 , HORVU5Hr1G053680.1 , HORVU5Hr1G053680.3 , HORVU5Hr1G053680.2
Wheat TraesCS5A02G176600 , TraesCS5A02G176600 , TraesCS5A02G176600 , TraesCS5A02G176600 , TraesCS5B02G173300 , TraesCS5B02G173300 , TraesCS5B02G173300 , TraesCS5B02G173300 , TraesCS5D02G180300 , TraesCS5D02G180300 , TraesCS5D02G180300 , TraesCS5D02G180300
Populus -


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cDNA sequences
Sobic.002G157100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G220900 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
2 Sobic.001G323300 ethylene-responsive element-binding protein, putative, expressed -
3 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
4 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
5 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
6 Sobic.008G130400 prefoldin, putative, expressed -
7 Sobic.001G030300 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17778: mitochondrial import inner membrane translocase subunit TIM10
8 Sobic.009G104100 peptidase, M24 family protein, putative, expressed -
9 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
10 Sobic.003G124300 peroxiredoxin, putative, expressed -
11 Sobic.006G126000 26S proteasome non-ATPase regulatory subunit 6, putative, expressed K03037: PSMD6, 26S proteasome regulatory subunit N7
12 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
13 Sobic.004G056400 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
14 Sobic.002G101000 mitochondrial prohibitin complex protein 2, putative, expressed K17081: prohibitin 2
15 Sobic.002G353000 5-formyltetrahydrofolate cyclo-ligase, putative, expressed K01934: 5-formyltetrahydrofolate cyclo-ligase
16 Sobic.002G159900 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
17 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
18 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
19 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
20 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9


Gene co-expression network
sample Sobic002G157100 Sobic002G157100 Sobic007G220900 Sobic007G220900 Sobic002G157100--Sobic007G220900 Sobic001G323300 Sobic001G323300 Sobic002G157100--Sobic001G323300 Sobic004G030000 Sobic004G030000 Sobic002G157100--Sobic004G030000 Sobic001G342200 Sobic001G342200 Sobic002G157100--Sobic001G342200 Sobic001G057300 Sobic001G057300 Sobic002G157100--Sobic001G057300 Sobic008G130400 Sobic008G130400 Sobic002G157100--Sobic008G130400 Sobic001G030300 Sobic001G030300 Sobic002G157100--Sobic001G030300 Sobic009G104100 Sobic009G104100 Sobic002G157100--Sobic009G104100 Sobic001G350600 Sobic001G350600 Sobic002G157100--Sobic001G350600 Sobic001G481700 Sobic001G481700 Sobic007G220900--Sobic001G481700 Sobic002G101000 Sobic002G101000 Sobic007G220900--Sobic002G101000 Sobic010G100000 Sobic010G100000 Sobic007G220900--Sobic010G100000 Sobic001G513500 Sobic001G513500 Sobic007G220900--Sobic001G513500 Sobic007G220900--Sobic009G104100 Sobic009G179100 Sobic009G179100 Sobic007G220900--Sobic009G179100 Sobic008G094600 Sobic008G094600 Sobic007G220900--Sobic008G094600 Sobic001G025600 Sobic001G025600 Sobic007G220900--Sobic001G025600 Sobic007G220900--Sobic001G030300 Sobic001G458700 Sobic001G458700 Sobic001G323300--Sobic001G458700 Sobic007G118000 Sobic007G118000 Sobic001G323300--Sobic007G118000 Sobic007G045600 Sobic007G045600 Sobic001G323300--Sobic007G045600 Sobic004G344800 Sobic004G344800 Sobic001G323300--Sobic004G344800 Sobic001G031900 Sobic001G031900 Sobic001G323300--Sobic001G031900 Sobic005G086500 Sobic005G086500 Sobic001G323300--Sobic005G086500 Sobic007G176200 Sobic007G176200 Sobic001G323300--Sobic007G176200 Sobic001G323300--Sobic004G030000 Sobic001G323300--Sobic002G157100 Sobic003G152900 Sobic003G152900 Sobic004G030000--Sobic003G152900 Sobic004G030000--Sobic001G350600 Sobic001G465800 Sobic001G465800 Sobic004G030000--Sobic001G465800 Sobic002G309700 Sobic002G309700 Sobic004G030000--Sobic002G309700 Sobic001G074700 Sobic001G074700 Sobic004G030000--Sobic001G074700 Sobic004G170400 Sobic004G170400 Sobic004G030000--Sobic004G170400 Sobic010G007400 Sobic010G007400 Sobic004G030000--Sobic010G007400 Sobic004G030000--Sobic004G344800 Sobic004G159000 Sobic004G159000 Sobic004G030000--Sobic004G159000 Sobic001G342200--Sobic001G057300 Sobic001G060300 Sobic001G060300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic007G092100 Sobic007G092100 Sobic001G342200--Sobic007G092100 Sobic010G008800 Sobic010G008800 Sobic001G342200--Sobic010G008800 Sobic001G342200--Sobic004G170400 Sobic001G342200--Sobic001G074700 Sobic001G342200--Sobic001G031900 Sobic006G216600 Sobic006G216600 Sobic001G057300--Sobic006G216600 Sobic002G304900 Sobic002G304900 Sobic001G057300--Sobic002G304900 Sobic008G135000 Sobic008G135000 Sobic001G057300--Sobic008G135000 Sobic001G058900 Sobic001G058900 Sobic001G057300--Sobic001G058900 Sobic001G334300 Sobic001G334300 Sobic001G057300--Sobic001G334300 Sobic001G085400 Sobic001G085400 Sobic001G057300--Sobic001G085400 Sobic006G035900 Sobic006G035900 Sobic001G057300--Sobic006G035900 Sobic002G115000 Sobic002G115000 Sobic001G057300--Sobic002G115000 Sobic003G387900 Sobic003G387900 Sobic001G057300--Sobic003G387900 Sobic002G263800 Sobic002G263800 Sobic008G130400--Sobic002G263800 Sobic009G232000 Sobic009G232000 Sobic008G130400--Sobic009G232000 Sobic008G132700 Sobic008G132700 Sobic008G130400--Sobic008G132700 Sobic008G130400--Sobic001G513500 Sobic001G418900 Sobic001G418900 Sobic008G130400--Sobic001G418900 Sobic001G483100 Sobic001G483100 Sobic008G130400--Sobic001G483100 Sobic004G310300 Sobic004G310300 Sobic008G130400--Sobic004G310300 Sobic006G138100 Sobic006G138100 Sobic008G130400--Sobic006G138100 Sobic004G224900 Sobic004G224900 Sobic008G130400--Sobic004G224900 Sobic002G135200 Sobic002G135200 Sobic001G030300--Sobic002G135200 Sobic001G030300--Sobic009G179100 Sobic006G261900 Sobic006G261900 Sobic001G030300--Sobic006G261900 Sobic001G030300--Sobic001G513500 Sobic010G023900 Sobic010G023900 Sobic001G030300--Sobic010G023900 Sobic009G101700 Sobic009G101700 Sobic001G030300--Sobic009G101700 Sobic009G119900 Sobic009G119900 Sobic001G030300--Sobic009G119900 Sobic002G356400 Sobic002G356400 Sobic001G030300--Sobic002G356400 Sobic002G296200 Sobic002G296200 Sobic001G030300--Sobic002G296200 Sobic009G104100--Sobic002G101000 Sobic009G104100--Sobic001G481700 Sobic009G104100--Sobic004G224900 Sobic005G050500 Sobic005G050500 Sobic009G104100--Sobic005G050500 Sobic009G104100--Sobic007G220900 Sobic003G330500 Sobic003G330500 Sobic009G104100--Sobic003G330500 Sobic008G132400 Sobic008G132400 Sobic009G104100--Sobic008G132400 Sobic009G104100--Sobic001G057300 Sobic007G076300 Sobic007G076300 Sobic009G104100--Sobic007G076300 Sobic001G350600--Sobic004G170400 Sobic004G259200 Sobic004G259200 Sobic001G350600--Sobic004G259200 Sobic001G350600--Sobic002G356400 Sobic001G350600--Sobic001G074700 Sobic001G350600--Sobic001G465800 Sobic003G209000 Sobic003G209000 Sobic001G350600--Sobic003G209000 Sobic001G404800 Sobic001G404800 Sobic001G350600--Sobic001G404800 Sobic001G350600--Sobic009G119900 Sobic001G350600--Sobic004G030000
Octagon: transcription factors


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