Gene annotation
Transcriptome id Sobic.001G512400.1
Synonym Sb01g047810
Functional annotation expressed protein
UniProt Q1KSB7
Pfam PF13967 PF02714
Panther DB PTHR13018 PTHR13018:SF52
NCBI CDD KOG1134; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT4G35870 : early-responsive to dehydration stress protein (ERD4)
RAP-DB (Rice) LOC_Os03g04450.1 : expressed protein
MaizeGDB (Corn) Zm00025a053384
Brachypodium KQK23761 , KQK01002
Barley HORVU4Hr1G080450.3 , HORVU4Hr1G080450.5 , HORVU4Hr1G080450.4 , HORVU4Hr1G080450.7 , HORVU4Hr1G080450.6 , HORVU4Hr1G080450.9 , HORVU4Hr1G080450.8 , HORVU4Hr1G080450.10
Wheat -
Populus -


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cDNA sequences
Sobic.001G512400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
2 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
3 Sobic.002G040700 tetratricopeptide repeat, putative, expressed -
4 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
5 Sobic.001G421400 expressed protein -
6 Sobic.008G165000 LSD1 zinc finger domain containing protein, expressed -
7 Sobic.001G161900 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
8 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
9 Sobic.010G188200 SFT2, putative, expressed -
10 Sobic.001G459500 leucine rich repeat containing protein, expressed -
11 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
12 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
13 Sobic.002G296300 expressed protein -
14 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
15 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
16 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
17 Sobic.001G048700 TBC domain containing protein, expressed -
18 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
19 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
20 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -


Gene co-expression network
sample Sobic001G512400 Sobic001G512400 Sobic001G313500 Sobic001G313500 Sobic001G512400--Sobic001G313500 Sobic009G135600 Sobic009G135600 Sobic001G512400--Sobic009G135600 Sobic002G040700 Sobic002G040700 Sobic001G512400--Sobic002G040700 Sobic006G263900 Sobic006G263900 Sobic001G512400--Sobic006G263900 Sobic001G421400 Sobic001G421400 Sobic001G512400--Sobic001G421400 Sobic008G165000 Sobic008G165000 Sobic001G512400--Sobic008G165000 Sobic001G161900 Sobic001G161900 Sobic001G512400--Sobic001G161900 Sobic003G349300 Sobic003G349300 Sobic001G512400--Sobic003G349300 Sobic010G188200 Sobic010G188200 Sobic001G512400--Sobic010G188200 Sobic001G313500--Sobic001G421400 Sobic001G313500--Sobic001G512400 Sobic001G085900 Sobic001G085900 Sobic001G313500--Sobic001G085900 Sobic002G385900 Sobic002G385900 Sobic001G313500--Sobic002G385900 Sobic001G313500--Sobic001G161900 Sobic010G129600 Sobic010G129600 Sobic001G313500--Sobic010G129600 Sobic001G313500--Sobic009G135600 Sobic010G261600 Sobic010G261600 Sobic001G313500--Sobic010G261600 Sobic004G039300 Sobic004G039300 Sobic001G313500--Sobic004G039300 Sobic001G461900 Sobic001G461900 Sobic009G135600--Sobic001G461900 Sobic009G135600--Sobic003G349300 Sobic009G146100 Sobic009G146100 Sobic009G135600--Sobic009G146100 Sobic001G433400 Sobic001G433400 Sobic009G135600--Sobic001G433400 Sobic009G135600--Sobic002G385900 Sobic001G388200 Sobic001G388200 Sobic009G135600--Sobic001G388200 Sobic002G400000 Sobic002G400000 Sobic009G135600--Sobic002G400000 Sobic001G294900 Sobic001G294900 Sobic009G135600--Sobic001G294900 Sobic001G054200 Sobic001G054200 Sobic009G135600--Sobic001G054200 Sobic002G040700--Sobic001G512400 Sobic001G439600 Sobic001G439600 Sobic002G040700--Sobic001G439600 Sobic002G040700--Sobic008G165000 Sobic001G105500 Sobic001G105500 Sobic002G040700--Sobic001G105500 Sobic007G118000 Sobic007G118000 Sobic002G040700--Sobic007G118000 Sobic004G010900 Sobic004G010900 Sobic002G040700--Sobic004G010900 Sobic003G116600 Sobic003G116600 Sobic002G040700--Sobic003G116600 Sobic001G048700 Sobic001G048700 Sobic002G040700--Sobic001G048700 Sobic001G367000 Sobic001G367000 Sobic002G040700--Sobic001G367000 Sobic010G083700 Sobic010G083700 Sobic006G263900--Sobic010G083700 Sobic006G263900--Sobic001G054200 Sobic010G168600 Sobic010G168600 Sobic006G263900--Sobic010G168600 Sobic001G395400 Sobic001G395400 Sobic006G263900--Sobic001G395400 Sobic001G078500 Sobic001G078500 Sobic006G263900--Sobic001G078500 Sobic006G212100 Sobic006G212100 Sobic006G263900--Sobic006G212100 Sobic010G253800 Sobic010G253800 Sobic006G263900--Sobic010G253800 Sobic009G246950 Sobic009G246950 Sobic006G263900--Sobic009G246950 Sobic003G007500 Sobic003G007500 Sobic006G263900--Sobic003G007500 Sobic001G421400--Sobic001G313500 Sobic010G243400 Sobic010G243400 Sobic001G421400--Sobic010G243400 Sobic003G382900 Sobic003G382900 Sobic001G421400--Sobic003G382900 Sobic001G421400--Sobic001G161900 Sobic003G200600 Sobic003G200600 Sobic001G421400--Sobic003G200600 Sobic007G056100 Sobic007G056100 Sobic001G421400--Sobic007G056100 Sobic001G421400--Sobic001G512400 Sobic003G148900 Sobic003G148900 Sobic001G421400--Sobic003G148900 Sobic001G421400--Sobic010G261600 Sobic008G165000--Sobic010G243400 Sobic006G254600 Sobic006G254600 Sobic008G165000--Sobic006G254600 Sobic001G489700 Sobic001G489700 Sobic008G165000--Sobic001G489700 Sobic002G378200 Sobic002G378200 Sobic008G165000--Sobic002G378200 Sobic001G085500 Sobic001G085500 Sobic008G165000--Sobic001G085500 Sobic004G094300 Sobic004G094300 Sobic008G165000--Sobic004G094300 Sobic008G165000--Sobic002G040700 Sobic008G165000--Sobic001G512400 Sobic001G522900 Sobic001G522900 Sobic008G165000--Sobic001G522900 Sobic009G160600 Sobic009G160600 Sobic001G161900--Sobic009G160600 Sobic001G161900--Sobic010G129600 Sobic001G161900--Sobic001G421400 Sobic001G005600 Sobic001G005600 Sobic001G161900--Sobic001G005600 Sobic001G161900--Sobic010G261600 Sobic001G161900--Sobic001G313500 Sobic003G053800 Sobic003G053800 Sobic001G161900--Sobic003G053800 Sobic001G161900--Sobic010G243400 Sobic001G161900--Sobic001G512400 Sobic010G205300 Sobic010G205300 Sobic003G349300--Sobic010G205300 Sobic003G349300--Sobic001G294900 Sobic003G349300--Sobic009G135600 Sobic003G349300--Sobic001G388200 Sobic004G181900 Sobic004G181900 Sobic003G349300--Sobic004G181900 Sobic009G192000 Sobic009G192000 Sobic003G349300--Sobic009G192000 Sobic001G283200 Sobic001G283200 Sobic003G349300--Sobic001G283200 Sobic003G261400 Sobic003G261400 Sobic003G349300--Sobic003G261400 Sobic007G168600 Sobic007G168600 Sobic003G349300--Sobic007G168600 Sobic001G459500 Sobic001G459500 Sobic010G188200--Sobic001G459500 Sobic007G045600 Sobic007G045600 Sobic010G188200--Sobic007G045600 Sobic007G142500 Sobic007G142500 Sobic010G188200--Sobic007G142500 Sobic010G188200--Sobic001G461900 Sobic004G289800 Sobic004G289800 Sobic010G188200--Sobic004G289800 Sobic010G188200--Sobic009G135600 Sobic010G188200--Sobic001G512400 Sobic010G188200--Sobic007G118000 Sobic002G281300 Sobic002G281300 Sobic010G188200--Sobic002G281300
Octagon: transcription factors


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