Gene annotation
Transcriptome id Sobic.001G421400.1
Synonym Sb01g039640
Functional annotation expressed protein
UniProt C5WQ03
Pfam -
Panther DB PTHR34210 PTHR34210:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22040 : -
RAP-DB (Rice) LOC_Os03g16730.1 : expressed protein
MaizeGDB (Corn) Zm00025a001834
Brachypodium -
Barley HORVU4Hr1G059740.3 , HORVU4Hr1G059740.2 , HORVU4Hr1G059740.5 , HORVU4Hr1G059740.1
Wheat TraesCS4A02G096800 , TraesCS4D02G208500 , TraesCS4B02G207600 , TraesCS4B02G207600
Populus -


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cDNA sequences
Sobic.001G421400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
2 Sobic.010G243400 expressed protein -
3 Sobic.003G382900 signal recognition particle 72 kDa protein, putative, expressed K03108: signal recognition particle subunit SRP72
4 Sobic.001G161900 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
5 Sobic.003G200600 CBS domain containing membrane protein, putative, expressed -
6 Sobic.007G056100 expressed protein K15077: elongin-A
7 Sobic.001G512400 expressed protein -
8 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
9 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
10 Sobic.008G165000 LSD1 zinc finger domain containing protein, expressed -
11 Sobic.009G160600 Yip1 domain containing protein, expressed -
12 Sobic.006G225300 expressed protein -
13 Sobic.008G102600 expressed protein -
14 Sobic.009G228700 expressed protein -
15 Sobic.001G091300 HTH DNA-binding protein, putative, expressed -
16 Sobic.009G224000 OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed K10758: thiol oxidase
17 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
18 Sobic.009G225000 transmembrane protein 93, putative, expressed -
19 Sobic.003G201900 coiled-coil domain-containing protein, putative, expressed -
20 Sobic.001G048700 TBC domain containing protein, expressed -


Gene co-expression network
sample Sobic001G421400 Sobic001G421400 Sobic001G313500 Sobic001G313500 Sobic001G421400--Sobic001G313500 Sobic010G243400 Sobic010G243400 Sobic001G421400--Sobic010G243400 Sobic003G382900 Sobic003G382900 Sobic001G421400--Sobic003G382900 Sobic001G161900 Sobic001G161900 Sobic001G421400--Sobic001G161900 Sobic003G200600 Sobic003G200600 Sobic001G421400--Sobic003G200600 Sobic007G056100 Sobic007G056100 Sobic001G421400--Sobic007G056100 Sobic001G512400 Sobic001G512400 Sobic001G421400--Sobic001G512400 Sobic003G148900 Sobic003G148900 Sobic001G421400--Sobic003G148900 Sobic010G261600 Sobic010G261600 Sobic001G421400--Sobic010G261600 Sobic001G313500--Sobic001G421400 Sobic001G313500--Sobic001G512400 Sobic001G085900 Sobic001G085900 Sobic001G313500--Sobic001G085900 Sobic002G385900 Sobic002G385900 Sobic001G313500--Sobic002G385900 Sobic001G313500--Sobic001G161900 Sobic010G129600 Sobic010G129600 Sobic001G313500--Sobic010G129600 Sobic009G135600 Sobic009G135600 Sobic001G313500--Sobic009G135600 Sobic001G313500--Sobic010G261600 Sobic004G039300 Sobic004G039300 Sobic001G313500--Sobic004G039300 Sobic008G165000 Sobic008G165000 Sobic010G243400--Sobic008G165000 Sobic010G243400--Sobic007G056100 Sobic010G243400--Sobic010G261600 Sobic003G243700 Sobic003G243700 Sobic010G243400--Sobic003G243700 Sobic009G041700 Sobic009G041700 Sobic010G243400--Sobic009G041700 Sobic009G224000 Sobic009G224000 Sobic010G243400--Sobic009G224000 Sobic004G003401 Sobic004G003401 Sobic010G243400--Sobic004G003401 Sobic008G173400 Sobic008G173400 Sobic010G243400--Sobic008G173400 Sobic010G243400--Sobic001G421400 Sobic009G160600 Sobic009G160600 Sobic003G382900--Sobic009G160600 Sobic003G382900--Sobic001G421400 Sobic010G238700 Sobic010G238700 Sobic003G382900--Sobic010G238700 Sobic006G225300 Sobic006G225300 Sobic003G382900--Sobic006G225300 Sobic002G090700 Sobic002G090700 Sobic003G382900--Sobic002G090700 Sobic003G382900--Sobic003G148900 Sobic003G382900--Sobic001G161900 Sobic006G222400 Sobic006G222400 Sobic003G382900--Sobic006G222400 Sobic003G038600 Sobic003G038600 Sobic003G382900--Sobic003G038600 Sobic001G161900--Sobic009G160600 Sobic001G161900--Sobic010G129600 Sobic001G161900--Sobic001G421400 Sobic001G005600 Sobic001G005600 Sobic001G161900--Sobic001G005600 Sobic001G161900--Sobic010G261600 Sobic001G161900--Sobic001G313500 Sobic003G053800 Sobic003G053800 Sobic001G161900--Sobic003G053800 Sobic001G161900--Sobic010G243400 Sobic001G161900--Sobic001G512400 Sobic003G200600--Sobic003G148900 Sobic003G200600--Sobic001G421400 Sobic007G117800 Sobic007G117800 Sobic003G200600--Sobic007G117800 Sobic002G401700 Sobic002G401700 Sobic003G200600--Sobic002G401700 Sobic001G112400 Sobic001G112400 Sobic003G200600--Sobic001G112400 Sobic003G200600--Sobic001G313500 Sobic007G012900 Sobic007G012900 Sobic003G200600--Sobic007G012900 Sobic001G378200 Sobic001G378200 Sobic003G200600--Sobic001G378200 Sobic005G184200 Sobic005G184200 Sobic003G200600--Sobic005G184200 Sobic005G177700 Sobic005G177700 Sobic007G056100--Sobic005G177700 Sobic007G056100--Sobic010G243400 Sobic002G355800 Sobic002G355800 Sobic007G056100--Sobic002G355800 Sobic007G056100--Sobic009G224000 Sobic003G199500 Sobic003G199500 Sobic007G056100--Sobic003G199500 Sobic007G056100--Sobic001G421400 Sobic007G056100--Sobic010G261600 Sobic002G303600 Sobic002G303600 Sobic007G056100--Sobic002G303600 Sobic001G465400 Sobic001G465400 Sobic007G056100--Sobic001G465400 Sobic001G512400--Sobic001G313500 Sobic001G512400--Sobic009G135600 Sobic002G040700 Sobic002G040700 Sobic001G512400--Sobic002G040700 Sobic006G263900 Sobic006G263900 Sobic001G512400--Sobic006G263900 Sobic001G512400--Sobic001G421400 Sobic001G512400--Sobic008G165000 Sobic001G512400--Sobic001G161900 Sobic003G349300 Sobic003G349300 Sobic001G512400--Sobic003G349300 Sobic010G188200 Sobic010G188200 Sobic001G512400--Sobic010G188200 Sobic003G148900--Sobic003G200600 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic002G423800 Sobic002G423800 Sobic003G148900--Sobic002G423800 Sobic003G148900--Sobic001G421400 Sobic003G128300 Sobic003G128300 Sobic003G148900--Sobic003G128300 Sobic003G224300 Sobic003G224300 Sobic003G148900--Sobic003G224300 Sobic003G338500 Sobic003G338500 Sobic010G261600--Sobic003G338500 Sobic010G261600--Sobic002G303600 Sobic002G008800 Sobic002G008800 Sobic010G261600--Sobic002G008800 Sobic004G228800 Sobic004G228800 Sobic010G261600--Sobic004G228800 Sobic004G323700 Sobic004G323700 Sobic010G261600--Sobic004G323700 Sobic002G262900 Sobic002G262900 Sobic010G261600--Sobic002G262900 Sobic009G228700 Sobic009G228700 Sobic010G261600--Sobic009G228700 Sobic004G275700 Sobic004G275700 Sobic010G261600--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic010G261600--Sobic010G020400
Octagon: transcription factors


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