Gene annotation
Transcriptome id Sobic.009G101400.3,Sobic.009G101400.2,Sobic.009G101400.4,Sobic.009G101400.1
Synonym DREB2, dehydration response element binding (DREB) transcription factor, SbERF91, DREB2A, (SbDREB2);ethylene response factor 91, Sb09g016150
Functional annotation "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. " (PubMedID : 24086146)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt J7FAT7 , A0A1B6P850 , J7FAA8 , J7FBE8
Pfam PF00847
Panther DB PTHR31241 PTHR31241:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G40340 : DRE-binding protein 2A,Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os05g27930.4,LOC_Os05g27930.1,LOC_Os05g27930.2 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a037171
Brachypodium KQK06814 , KQK06815 , KQK06816 , KQK06812 , KQK06813
Barley -
Wheat TraesCS1B02G235100 , TraesCS1B02G235100 , TraesCS1A02G221900 , TraesCS1A02G221900 , TraesCS1A02G221900 , TraesCS1D02G223600 , TraesCS1D02G223600 , TraesCS1A02G221900
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G101400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G291500 elongation factor, putative, expressed K03234: elongation factor 2
2 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
3 Sobic.001G365800 glutathione peroxidase domain containing protein, expressed K00432: gpx, btuE, glutathione peroxidase
4 Sobic.003G327100 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
5 Sobic.003G081700 OsWAK1 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
6 Sobic.009G129900 endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
7 Sobic.001G530500 per1-like family protein, putative, expressed -
8 Sobic.006G269000 protein kinase, putative, expressed -
9 Sobic.001G106700 expressed protein -
10 Sobic.004G063100 calmodulin binding protein, putative, expressed -
11 Sobic.004G083300 OsFBL7 - F-box domain and LRR containing protein, expressed K14515: EIN3-binding F-box protein
12 Sobic.003G370900 expressed protein -
13 Sobic.003G372100 proton-dependent oligopeptide transport, putative, expressed -
14 Sobic.001G460600 RING zinc finger protein-like, putative, expressed -
15 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14
16 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
17 Sobic.010G092300 N-rich protein, putative, expressed -
18 Sobic.009G149300 expressed protein -
19 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
20 Sobic.001G048100 OsAPRL5 adenosine 5\'-phosphosulfate reductase-like OsAPRL5, expressed -


Gene co-expression network
sample Sobic009G101400 Sobic009G101400 Sobic003G291500 Sobic003G291500 Sobic009G101400--Sobic003G291500 Sobic001G294200 Sobic001G294200 Sobic009G101400--Sobic001G294200 Sobic001G365800 Sobic001G365800 Sobic009G101400--Sobic001G365800 Sobic003G327100 Sobic003G327100 Sobic009G101400--Sobic003G327100 Sobic003G081700 Sobic003G081700 Sobic009G101400--Sobic003G081700 Sobic009G129900 Sobic009G129900 Sobic009G101400--Sobic009G129900 Sobic001G530500 Sobic001G530500 Sobic009G101400--Sobic001G530500 Sobic006G269000 Sobic006G269000 Sobic009G101400--Sobic006G269000 Sobic001G106700 Sobic001G106700 Sobic009G101400--Sobic001G106700 Sobic003G291500--Sobic009G101400 Sobic003G291500--Sobic001G294200 Sobic010G262433 Sobic010G262433 Sobic003G291500--Sobic010G262433 Sobic003G291500--Sobic001G106700 Sobic008G118900 Sobic008G118900 Sobic003G291500--Sobic008G118900 Sobic002G071000 Sobic002G071000 Sobic003G291500--Sobic002G071000 Sobic001G013500 Sobic001G013500 Sobic003G291500--Sobic001G013500 Sobic003G264200 Sobic003G264200 Sobic003G291500--Sobic003G264200 Sobic001G461900 Sobic001G461900 Sobic003G291500--Sobic001G461900 Sobic003G078800 Sobic003G078800 Sobic001G294200--Sobic003G078800 Sobic001G543300 Sobic001G543300 Sobic001G294200--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G294200--Sobic006G262900 Sobic001G512600 Sobic001G512600 Sobic001G294200--Sobic001G512600 Sobic009G133400 Sobic009G133400 Sobic001G294200--Sobic009G133400 Sobic002G129000 Sobic002G129000 Sobic001G294200--Sobic002G129000 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic002G352600 Sobic002G352600 Sobic001G365800--Sobic002G352600 Sobic007G007000 Sobic007G007000 Sobic001G365800--Sobic007G007000 Sobic009G149300 Sobic009G149300 Sobic001G365800--Sobic009G149300 Sobic003G010400 Sobic003G010400 Sobic001G365800--Sobic003G010400 Sobic001G365800--Sobic001G530500 Sobic006G119800 Sobic006G119800 Sobic001G365800--Sobic006G119800 Sobic001G365800--Sobic001G294200 Sobic010G000900 Sobic010G000900 Sobic001G365800--Sobic010G000900 Sobic006G194500 Sobic006G194500 Sobic001G365800--Sobic006G194500 Sobic003G327100--Sobic006G262900 Sobic001G138300 Sobic001G138300 Sobic003G327100--Sobic001G138300 Sobic003G327100--Sobic009G101400 Sobic003G048500 Sobic003G048500 Sobic003G327100--Sobic003G048500 Sobic003G327100--Sobic001G530500 Sobic010G092300 Sobic010G092300 Sobic003G327100--Sobic010G092300 Sobic006G198500 Sobic006G198500 Sobic003G327100--Sobic006G198500 Sobic001G208300 Sobic001G208300 Sobic003G327100--Sobic001G208300 Sobic003G327100--Sobic001G294200 Sobic008G146900 Sobic008G146900 Sobic003G081700--Sobic008G146900 Sobic001G159400 Sobic001G159400 Sobic003G081700--Sobic001G159400 Sobic002G137000 Sobic002G137000 Sobic003G081700--Sobic002G137000 Sobic004G181700 Sobic004G181700 Sobic003G081700--Sobic004G181700 Sobic010G184600 Sobic010G184600 Sobic003G081700--Sobic010G184600 Sobic003G081700--Sobic001G530500 Sobic001G106600 Sobic001G106600 Sobic003G081700--Sobic001G106600 Sobic004G181600 Sobic004G181600 Sobic003G081700--Sobic004G181600 Sobic001G072700 Sobic001G072700 Sobic003G081700--Sobic001G072700 Sobic003G370900 Sobic003G370900 Sobic009G129900--Sobic003G370900 Sobic009G129900--Sobic009G101400 Sobic009G129900--Sobic001G365800 Sobic007G058700 Sobic007G058700 Sobic009G129900--Sobic007G058700 Sobic002G116900 Sobic002G116900 Sobic009G129900--Sobic002G116900 Sobic009G129900--Sobic001G106700 Sobic009G129900--Sobic003G291500 Sobic007G216100 Sobic007G216100 Sobic009G129900--Sobic007G216100 Sobic001G047400 Sobic001G047400 Sobic009G129900--Sobic001G047400 Sobic001G530500--Sobic001G365800 Sobic001G530500--Sobic003G048500 Sobic009G162600 Sobic009G162600 Sobic001G530500--Sobic009G162600 Sobic003G340600 Sobic003G340600 Sobic001G530500--Sobic003G340600 Sobic004G121100 Sobic004G121100 Sobic001G530500--Sobic004G121100 Sobic001G530500--Sobic010G092300 Sobic001G530500--Sobic003G081700 Sobic001G048100 Sobic001G048100 Sobic001G530500--Sobic001G048100 Sobic001G530500--Sobic003G327100 Sobic002G137300 Sobic002G137300 Sobic006G269000--Sobic002G137300 Sobic006G004600 Sobic006G004600 Sobic006G269000--Sobic006G004600 Sobic004G214100 Sobic004G214100 Sobic006G269000--Sobic004G214100 Sobic001G072800 Sobic001G072800 Sobic006G269000--Sobic001G072800 Sobic003G261900 Sobic003G261900 Sobic006G269000--Sobic003G261900 Sobic007G168200 Sobic007G168200 Sobic006G269000--Sobic007G168200 Sobic002G242200 Sobic002G242200 Sobic006G269000--Sobic002G242200 Sobic009G190800 Sobic009G190800 Sobic006G269000--Sobic009G190800 Sobic001G417900 Sobic001G417900 Sobic006G269000--Sobic001G417900 Sobic001G106700--Sobic003G370900 Sobic003G117900 Sobic003G117900 Sobic001G106700--Sobic003G117900 Sobic001G007200 Sobic001G007200 Sobic001G106700--Sobic001G007200 Sobic001G473300 Sobic001G473300 Sobic001G106700--Sobic001G473300 Sobic001G460600 Sobic001G460600 Sobic001G106700--Sobic001G460600 Sobic001G415500 Sobic001G415500 Sobic001G106700--Sobic001G415500 Sobic002G134001 Sobic002G134001 Sobic001G106700--Sobic002G134001 Sobic001G106700--Sobic007G216100 Sobic009G185800 Sobic009G185800 Sobic001G106700--Sobic009G185800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.