Gene annotation
Transcriptome id Sobic.009G129900.1
Synonym Sb09g019640
Functional annotation endo-1,3
1,4-beta-D-glucanase precursor, putative, expressed
UniProt C5YXM2
Pfam PF12695
Panther DB PTHR17630 PTHR17630:SF53
NCBI CDD KOG3043; Predicted hydrolase related to dienelactone hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G23600 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g33110.1 : endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a037033
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G129900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G370900 expressed protein -
2 Sobic.009G101400 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.001G365800 glutathione peroxidase domain containing protein, expressed K00432: gpx, btuE, glutathione peroxidase
4 Sobic.007G058700 chaperonin, putative, expressed -
5 Sobic.002G116900 expressed protein -
6 Sobic.001G106700 expressed protein -
7 Sobic.003G291500 elongation factor, putative, expressed K03234: elongation factor 2
8 Sobic.007G216100 expressed protein -
9 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
10 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
11 Sobic.002G402000 expressed protein -
12 Sobic.010G000900 spotted leaf 11, putative, expressed -
13 Sobic.003G261500 lipase, putative, expressed -
14 Sobic.001G530500 per1-like family protein, putative, expressed -
15 Sobic.001G175800 expressed protein -
16 Sobic.001G460600 RING zinc finger protein-like, putative, expressed -
17 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
18 Sobic.003G274800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
19 Sobic.002G393500 expressed protein -
20 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14


Gene co-expression network
sample Sobic009G129900 Sobic009G129900 Sobic003G370900 Sobic003G370900 Sobic009G129900--Sobic003G370900 Sobic009G101400 Sobic009G101400 Sobic009G129900--Sobic009G101400 Sobic001G365800 Sobic001G365800 Sobic009G129900--Sobic001G365800 Sobic007G058700 Sobic007G058700 Sobic009G129900--Sobic007G058700 Sobic002G116900 Sobic002G116900 Sobic009G129900--Sobic002G116900 Sobic001G106700 Sobic001G106700 Sobic009G129900--Sobic001G106700 Sobic003G291500 Sobic003G291500 Sobic009G129900--Sobic003G291500 Sobic007G216100 Sobic007G216100 Sobic009G129900--Sobic007G216100 Sobic001G047400 Sobic001G047400 Sobic009G129900--Sobic001G047400 Sobic003G370900--Sobic001G106700 Sobic001G473300 Sobic001G473300 Sobic003G370900--Sobic001G473300 Sobic003G117900 Sobic003G117900 Sobic003G370900--Sobic003G117900 Sobic001G181700 Sobic001G181700 Sobic003G370900--Sobic001G181700 Sobic001G460600 Sobic001G460600 Sobic003G370900--Sobic001G460600 Sobic003G370900--Sobic007G058700 Sobic004G235000 Sobic004G235000 Sobic003G370900--Sobic004G235000 Sobic001G007200 Sobic001G007200 Sobic003G370900--Sobic001G007200 Sobic009G165800 Sobic009G165800 Sobic003G370900--Sobic009G165800 Sobic009G101400--Sobic003G291500 Sobic001G294200 Sobic001G294200 Sobic009G101400--Sobic001G294200 Sobic009G101400--Sobic001G365800 Sobic003G327100 Sobic003G327100 Sobic009G101400--Sobic003G327100 Sobic003G081700 Sobic003G081700 Sobic009G101400--Sobic003G081700 Sobic009G101400--Sobic009G129900 Sobic001G530500 Sobic001G530500 Sobic009G101400--Sobic001G530500 Sobic006G269000 Sobic006G269000 Sobic009G101400--Sobic006G269000 Sobic009G101400--Sobic001G106700 Sobic002G352600 Sobic002G352600 Sobic001G365800--Sobic002G352600 Sobic007G007000 Sobic007G007000 Sobic001G365800--Sobic007G007000 Sobic009G149300 Sobic009G149300 Sobic001G365800--Sobic009G149300 Sobic003G010400 Sobic003G010400 Sobic001G365800--Sobic003G010400 Sobic001G365800--Sobic001G530500 Sobic006G119800 Sobic006G119800 Sobic001G365800--Sobic006G119800 Sobic001G365800--Sobic001G294200 Sobic010G000900 Sobic010G000900 Sobic001G365800--Sobic010G000900 Sobic006G194500 Sobic006G194500 Sobic001G365800--Sobic006G194500 Sobic007G058700--Sobic003G370900 Sobic007G058700--Sobic001G181700 Sobic001G113000 Sobic001G113000 Sobic007G058700--Sobic001G113000 Sobic007G058700--Sobic009G165800 Sobic001G080700 Sobic001G080700 Sobic007G058700--Sobic001G080700 Sobic001G479100 Sobic001G479100 Sobic007G058700--Sobic001G479100 Sobic004G121100 Sobic004G121100 Sobic007G058700--Sobic004G121100 Sobic009G222500 Sobic009G222500 Sobic007G058700--Sobic009G222500 Sobic002G047333 Sobic002G047333 Sobic007G058700--Sobic002G047333 Sobic002G116900--Sobic001G047400 Sobic004G296400 Sobic004G296400 Sobic002G116900--Sobic004G296400 Sobic010G251000 Sobic010G251000 Sobic002G116900--Sobic010G251000 Sobic005G168600 Sobic005G168600 Sobic002G116900--Sobic005G168600 Sobic002G116900--Sobic009G165800 Sobic004G183600 Sobic004G183600 Sobic002G116900--Sobic004G183600 Sobic010G051300 Sobic010G051300 Sobic002G116900--Sobic010G051300 Sobic001G270400 Sobic001G270400 Sobic002G116900--Sobic001G270400 Sobic006G244700 Sobic006G244700 Sobic002G116900--Sobic006G244700 Sobic001G106700--Sobic003G370900 Sobic001G106700--Sobic003G117900 Sobic001G106700--Sobic001G007200 Sobic001G106700--Sobic001G473300 Sobic001G106700--Sobic001G460600 Sobic001G415500 Sobic001G415500 Sobic001G106700--Sobic001G415500 Sobic002G134001 Sobic002G134001 Sobic001G106700--Sobic002G134001 Sobic001G106700--Sobic007G216100 Sobic009G185800 Sobic009G185800 Sobic001G106700--Sobic009G185800 Sobic003G291500--Sobic009G101400 Sobic003G291500--Sobic001G294200 Sobic010G262433 Sobic010G262433 Sobic003G291500--Sobic010G262433 Sobic003G291500--Sobic001G106700 Sobic008G118900 Sobic008G118900 Sobic003G291500--Sobic008G118900 Sobic002G071000 Sobic002G071000 Sobic003G291500--Sobic002G071000 Sobic001G013500 Sobic001G013500 Sobic003G291500--Sobic001G013500 Sobic003G264200 Sobic003G264200 Sobic003G291500--Sobic003G264200 Sobic001G461900 Sobic001G461900 Sobic003G291500--Sobic001G461900 Sobic007G216100--Sobic010G000900 Sobic002G247500 Sobic002G247500 Sobic007G216100--Sobic002G247500 Sobic007G216100--Sobic003G117900 Sobic003G295900 Sobic003G295900 Sobic007G216100--Sobic003G295900 Sobic007G216100--Sobic001G106700 Sobic004G167400 Sobic004G167400 Sobic007G216100--Sobic004G167400 Sobic001G388200 Sobic001G388200 Sobic007G216100--Sobic001G388200 Sobic002G375300 Sobic002G375300 Sobic007G216100--Sobic002G375300 Sobic007G216100--Sobic003G370900 Sobic001G047400--Sobic002G116900 Sobic001G047400--Sobic009G165800 Sobic001G047400--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic001G047400--Sobic001G085100 Sobic001G047400--Sobic010G251000 Sobic003G015900 Sobic003G015900 Sobic001G047400--Sobic003G015900 Sobic001G051200 Sobic001G051200 Sobic001G047400--Sobic001G051200 Sobic001G261436 Sobic001G261436 Sobic001G047400--Sobic001G261436 Sobic009G228700 Sobic009G228700 Sobic001G047400--Sobic009G228700
Octagon: transcription factors


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