Gene annotation
Transcriptome id Sobic.001G175800.1
Synonym Sb01g015280
Functional annotation expressed protein
UniProt C5WTB0
Pfam -
Panther DB PTHR36075 PTHR36075:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55640 : -
RAP-DB (Rice) LOC_Os03g39820.1 : expressed protein
MaizeGDB (Corn) Zm00025a007179
Brachypodium -
Barley HORVU5Hr1G111340.1 , HORVU5Hr1G111340.2
Wheat TraesCS5B02G478500 , TraesCS5D02G479600
Populus -


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cDNA sequences
Sobic.001G175800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G096700 POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
3 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
4 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
5 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
7 Sobic.006G212100 expressed protein -
8 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
9 Sobic.004G272300 expressed protein -
10 Sobic.003G398300 mitochondrial import inner membrane translocase subunit Tim16, putative, expressed K17805: PAM16, mitochondrial import inner membrane translocase subunit TIM16
11 Sobic.001G395400 ubiquitin-conjugating enzyme, putative, expressed K10578: UBE2J1, NCUBE1, ubiquitin-conjugating enzyme E2 J1
12 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
13 Sobic.004G086600 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
14 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
15 Sobic.001G078500 expressed protein -
16 Sobic.001G447900 OsFBO13 - F-box and other domain containing protein, expressed K10293: F-box protein 7
17 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
18 Sobic.006G262900 expressed protein -
19 Sobic.001G461900 vesicle transport protein GOT1B, putative, expressed -
20 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein


Gene co-expression network
sample Sobic001G175800 Sobic001G175800 Sobic007G096700 Sobic007G096700 Sobic001G175800--Sobic007G096700 Sobic009G198500 Sobic009G198500 Sobic001G175800--Sobic009G198500 Sobic001G314500 Sobic001G314500 Sobic001G175800--Sobic001G314500 Sobic009G004600 Sobic009G004600 Sobic001G175800--Sobic009G004600 Sobic002G400000 Sobic002G400000 Sobic001G175800--Sobic002G400000 Sobic003G217400 Sobic003G217400 Sobic001G175800--Sobic003G217400 Sobic006G212100 Sobic006G212100 Sobic001G175800--Sobic006G212100 Sobic010G083700 Sobic010G083700 Sobic001G175800--Sobic010G083700 Sobic004G272300 Sobic004G272300 Sobic001G175800--Sobic004G272300 Sobic007G096700--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic007G096700--Sobic004G327300 Sobic009G122100 Sobic009G122100 Sobic007G096700--Sobic009G122100 Sobic001G501200 Sobic001G501200 Sobic007G096700--Sobic001G501200 Sobic001G005900 Sobic001G005900 Sobic007G096700--Sobic001G005900 Sobic007G096700--Sobic002G400000 Sobic004G130900 Sobic004G130900 Sobic007G096700--Sobic004G130900 Sobic007G096700--Sobic001G175800 Sobic004G300900 Sobic004G300900 Sobic007G096700--Sobic004G300900 Sobic009G198500--Sobic004G272300 Sobic003G124800 Sobic003G124800 Sobic009G198500--Sobic003G124800 Sobic009G198500--Sobic002G400000 Sobic007G168600 Sobic007G168600 Sobic009G198500--Sobic007G168600 Sobic002G078400 Sobic002G078400 Sobic009G198500--Sobic002G078400 Sobic009G198500--Sobic004G300900 Sobic009G198500--Sobic001G005900 Sobic009G198500--Sobic007G096700 Sobic009G198500--Sobic006G212100 Sobic001G314500--Sobic006G212100 Sobic001G314500--Sobic009G198500 Sobic001G314500--Sobic007G168600 Sobic001G388200 Sobic001G388200 Sobic001G314500--Sobic001G388200 Sobic006G232200 Sobic006G232200 Sobic001G314500--Sobic006G232200 Sobic001G054200 Sobic001G054200 Sobic001G314500--Sobic001G054200 Sobic001G314500--Sobic009G004600 Sobic010G205300 Sobic010G205300 Sobic001G314500--Sobic010G205300 Sobic001G314500--Sobic003G217400 Sobic009G004600--Sobic002G400000 Sobic004G356900 Sobic004G356900 Sobic009G004600--Sobic004G356900 Sobic009G004600--Sobic003G217400 Sobic009G004600--Sobic009G198500 Sobic001G263000 Sobic001G263000 Sobic009G004600--Sobic001G263000 Sobic009G004600--Sobic001G314500 Sobic002G113900 Sobic002G113900 Sobic009G004600--Sobic002G113900 Sobic009G004600--Sobic010G205300 Sobic009G004600--Sobic007G168600 Sobic002G400000--Sobic007G168600 Sobic003G077900 Sobic003G077900 Sobic002G400000--Sobic003G077900 Sobic002G400000--Sobic009G198500 Sobic002G400000--Sobic004G130900 Sobic001G433400 Sobic001G433400 Sobic002G400000--Sobic001G433400 Sobic001G395400 Sobic001G395400 Sobic002G400000--Sobic001G395400 Sobic002G400000--Sobic004G327300 Sobic002G400000--Sobic009G004600 Sobic010G000900 Sobic010G000900 Sobic002G400000--Sobic010G000900 Sobic003G261500 Sobic003G261500 Sobic003G217400--Sobic003G261500 Sobic003G217400--Sobic003G077900 Sobic003G217400--Sobic009G004600 Sobic003G217400--Sobic002G400000 Sobic003G217400--Sobic001G314500 Sobic003G217400--Sobic010G000900 Sobic003G217400--Sobic009G198500 Sobic001G051200 Sobic001G051200 Sobic003G217400--Sobic001G051200 Sobic003G217400--Sobic007G168600 Sobic006G212100--Sobic001G054200 Sobic006G212100--Sobic009G198500 Sobic006G212100--Sobic001G314500 Sobic006G263900 Sobic006G263900 Sobic006G212100--Sobic006G263900 Sobic006G212100--Sobic002G400000 Sobic006G212100--Sobic007G168600 Sobic009G174900 Sobic009G174900 Sobic006G212100--Sobic009G174900 Sobic006G212100--Sobic010G083700 Sobic006G212100--Sobic001G005900 Sobic010G083700--Sobic006G263900 Sobic010G168600 Sobic010G168600 Sobic010G083700--Sobic010G168600 Sobic010G083700--Sobic001G054200 Sobic001G007200 Sobic001G007200 Sobic010G083700--Sobic001G007200 Sobic009G246950 Sobic009G246950 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G253800 Sobic010G253800 Sobic010G083700--Sobic010G253800 Sobic002G256300 Sobic002G256300 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic004G272300--Sobic009G198500 Sobic004G272300--Sobic004G300900 Sobic004G272300--Sobic001G005900 Sobic004G272300--Sobic007G168600 Sobic004G272300--Sobic002G078400 Sobic004G272300--Sobic003G124800 Sobic004G351500 Sobic004G351500 Sobic004G272300--Sobic004G351500 Sobic004G272300--Sobic002G400000 Sobic004G272300--Sobic001G314500
Octagon: transcription factors


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