Gene annotation
Transcriptome id Sobic.003G398300.1
Synonym Sb03g043490, TXR1
Functional annotation mitochondrial import inner membrane translocase subunit Tim16, putative, expressed
UniProt C5XFL7
Pfam PF03656
Panther DB PTHR12388 PTHR12388:SF2
NCBI CDD KOG3442; Uncharacterized conserved protein
KEGG Orthology K17805; PAM16, mitochondrial import inner membrane translocase subunit TIM16
Gene Ontology GO:0005744; TIM23 mitochondrial import inner membrane translocase complex


Orthologs (automatic annotation)
TAIR AT3G59280 : Protein Transporter, Pam16
RAP-DB (Rice) LOC_Os10g33910.1 : mitochondrial import inner membrane translocase subunit Tim16, putative, expressed
MaizeGDB (Corn) Zm00025a026326
Brachypodium KQK11659
Barley HORVU3Hr1G111130.1 , HORVU3Hr1G111130.2 , HORVU3Hr1G111130.3 , HORVU3Hr1G111130.4 , HORVU3Hr1G111130.5 , HORVU3Hr1G111130.6 , HORVU3Hr1G104230.1 , HORVU3Hr1G104230.3 , HORVU3Hr1G104230.5
Wheat TraesCS3A02G505200 , TraesCS3B02G570900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G096700 POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.003G323600 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
3 Sobic.001G459500 leucine rich repeat containing protein, expressed -
4 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
5 Sobic.007G045600 MSP domain containing protein, expressed -
6 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
7 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
8 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
9 Sobic.006G141500 expressed protein -
10 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
11 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
12 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5
13 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
14 Sobic.001G143300 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
15 Sobic.010G154700 - -
16 Sobic.008G161800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
17 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
18 Sobic.007G142500 EF hand family protein, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
19 Sobic.001G175800 expressed protein -
20 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit


Gene co-expression network
sample Sobic003G398300 Sobic003G398300 Sobic007G096700 Sobic007G096700 Sobic003G398300--Sobic007G096700 Sobic003G323600 Sobic003G323600 Sobic003G398300--Sobic003G323600 Sobic001G459500 Sobic001G459500 Sobic003G398300--Sobic001G459500 Sobic003G124800 Sobic003G124800 Sobic003G398300--Sobic003G124800 Sobic007G045600 Sobic007G045600 Sobic003G398300--Sobic007G045600 Sobic002G090700 Sobic002G090700 Sobic003G398300--Sobic002G090700 Sobic009G198500 Sobic009G198500 Sobic003G398300--Sobic009G198500 Sobic004G300900 Sobic004G300900 Sobic003G398300--Sobic004G300900 Sobic006G141500 Sobic006G141500 Sobic003G398300--Sobic006G141500 Sobic007G096700--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic007G096700--Sobic004G327300 Sobic009G122100 Sobic009G122100 Sobic007G096700--Sobic009G122100 Sobic001G501200 Sobic001G501200 Sobic007G096700--Sobic001G501200 Sobic001G005900 Sobic001G005900 Sobic007G096700--Sobic001G005900 Sobic002G400000 Sobic002G400000 Sobic007G096700--Sobic002G400000 Sobic004G130900 Sobic004G130900 Sobic007G096700--Sobic004G130900 Sobic001G175800 Sobic001G175800 Sobic007G096700--Sobic001G175800 Sobic007G096700--Sobic004G300900 Sobic003G323600--Sobic007G045600 Sobic007G019100 Sobic007G019100 Sobic003G323600--Sobic007G019100 Sobic006G232200 Sobic006G232200 Sobic003G323600--Sobic006G232200 Sobic003G323600--Sobic001G459500 Sobic003G367451 Sobic003G367451 Sobic003G323600--Sobic003G367451 Sobic007G142500 Sobic007G142500 Sobic003G323600--Sobic007G142500 Sobic001G132100 Sobic001G132100 Sobic003G323600--Sobic001G132100 Sobic001G236300 Sobic001G236300 Sobic003G323600--Sobic001G236300 Sobic001G048832 Sobic001G048832 Sobic003G323600--Sobic001G048832 Sobic001G459500--Sobic003G323600 Sobic001G459500--Sobic007G045600 Sobic010G188200 Sobic010G188200 Sobic001G459500--Sobic010G188200 Sobic001G459500--Sobic007G142500 Sobic001G459500--Sobic003G398300 Sobic001G459500--Sobic006G232200 Sobic001G459500--Sobic003G367451 Sobic001G461900 Sobic001G461900 Sobic001G459500--Sobic001G461900 Sobic004G335000 Sobic004G335000 Sobic001G459500--Sobic004G335000 Sobic003G124800--Sobic009G198500 Sobic001G439600 Sobic001G439600 Sobic003G124800--Sobic001G439600 Sobic003G124800--Sobic006G232200 Sobic001G502200 Sobic001G502200 Sobic003G124800--Sobic001G502200 Sobic003G124800--Sobic007G045600 Sobic001G529000 Sobic001G529000 Sobic003G124800--Sobic001G529000 Sobic007G168600 Sobic007G168600 Sobic003G124800--Sobic007G168600 Sobic006G150600 Sobic006G150600 Sobic003G124800--Sobic006G150600 Sobic004G066800 Sobic004G066800 Sobic003G124800--Sobic004G066800 Sobic007G114200 Sobic007G114200 Sobic007G045600--Sobic007G114200 Sobic007G045600--Sobic007G019100 Sobic007G045600--Sobic003G124800 Sobic007G045600--Sobic006G232200 Sobic003G261400 Sobic003G261400 Sobic007G045600--Sobic003G261400 Sobic007G045600--Sobic007G142500 Sobic004G086600 Sobic004G086600 Sobic007G045600--Sobic004G086600 Sobic007G045600--Sobic001G461900 Sobic007G118000 Sobic007G118000 Sobic007G045600--Sobic007G118000 Sobic003G116600 Sobic003G116600 Sobic002G090700--Sobic003G116600 Sobic010G007400 Sobic010G007400 Sobic002G090700--Sobic010G007400 Sobic003G217100 Sobic003G217100 Sobic002G090700--Sobic003G217100 Sobic004G159000 Sobic004G159000 Sobic002G090700--Sobic004G159000 Sobic003G152900 Sobic003G152900 Sobic002G090700--Sobic003G152900 Sobic002G090700--Sobic004G066800 Sobic001G309500 Sobic001G309500 Sobic002G090700--Sobic001G309500 Sobic002G078400 Sobic002G078400 Sobic002G090700--Sobic002G078400 Sobic001G031900 Sobic001G031900 Sobic002G090700--Sobic001G031900 Sobic004G272300 Sobic004G272300 Sobic009G198500--Sobic004G272300 Sobic009G198500--Sobic003G124800 Sobic009G198500--Sobic002G400000 Sobic009G198500--Sobic007G168600 Sobic009G198500--Sobic002G078400 Sobic009G198500--Sobic004G300900 Sobic009G198500--Sobic001G005900 Sobic009G198500--Sobic007G096700 Sobic006G212100 Sobic006G212100 Sobic009G198500--Sobic006G212100 Sobic004G300900--Sobic002G078400 Sobic004G300900--Sobic006G141500 Sobic004G300900--Sobic009G198500 Sobic001G331900 Sobic001G331900 Sobic004G300900--Sobic001G331900 Sobic004G300900--Sobic001G005900 Sobic004G225500 Sobic004G225500 Sobic004G300900--Sobic004G225500 Sobic008G058300 Sobic008G058300 Sobic004G300900--Sobic008G058300 Sobic003G115800 Sobic003G115800 Sobic004G300900--Sobic003G115800 Sobic001G445800 Sobic001G445800 Sobic004G300900--Sobic001G445800 Sobic003G253000 Sobic003G253000 Sobic006G141500--Sobic003G253000 Sobic010G243200 Sobic010G243200 Sobic006G141500--Sobic010G243200 Sobic002G282400 Sobic002G282400 Sobic006G141500--Sobic002G282400 Sobic002G218000 Sobic002G218000 Sobic006G141500--Sobic002G218000 Sobic006G141500--Sobic004G300900 Sobic003G350300 Sobic003G350300 Sobic006G141500--Sobic003G350300 Sobic008G161800 Sobic008G161800 Sobic006G141500--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic006G141500--Sobic004G248800 Sobic002G046100 Sobic002G046100 Sobic006G141500--Sobic002G046100
Octagon: transcription factors


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