Gene annotation
Transcriptome id Sobic.003G372100.2
Synonym
Functional annotation proton-dependent oligopeptide transport, putative, expressed
UniProt C5XR99
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF179
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G22540 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g65210.1 : proton-dependent oligopeptide transport, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3D02G375200 , TraesCS3A02G382900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G101400 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
3 Sobic.003G078800 PB1 domain containing protein, expressed -
4 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
5 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14
6 Sobic.001G479200 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
7 Sobic.006G269000 protein kinase, putative, expressed -
8 Sobic.001G129300 ribosomal L18p/L5e family protein, putative, expressed -
9 Sobic.001G208300 Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.001G004700 expressed protein -
11 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
12 Sobic.006G228700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CrRLK1L-1.3 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
13 Sobic.003G376400 expressed protein -
14 Sobic.006G264500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
15 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
16 Sobic.006G119800 leucine rich repeat containing protein, expressed -
17 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
18 Sobic.004G083300 OsFBL7 - F-box domain and LRR containing protein, expressed K14515: EIN3-binding F-box protein
19 Sobic.004G103500 expressed protein -
20 Sobic.001G543300 dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic003G372100 Sobic003G372100 Sobic009G101400 Sobic009G101400 Sobic003G372100--Sobic009G101400 Sobic007G168200 Sobic007G168200 Sobic003G372100--Sobic007G168200 Sobic003G078800 Sobic003G078800 Sobic003G372100--Sobic003G078800 Sobic001G294200 Sobic001G294200 Sobic003G372100--Sobic001G294200 Sobic003G103200 Sobic003G103200 Sobic003G372100--Sobic003G103200 Sobic001G479200 Sobic001G479200 Sobic003G372100--Sobic001G479200 Sobic006G269000 Sobic006G269000 Sobic003G372100--Sobic006G269000 Sobic001G129300 Sobic001G129300 Sobic003G372100--Sobic001G129300 Sobic001G208300 Sobic001G208300 Sobic003G372100--Sobic001G208300 Sobic003G291500 Sobic003G291500 Sobic009G101400--Sobic003G291500 Sobic009G101400--Sobic001G294200 Sobic001G365800 Sobic001G365800 Sobic009G101400--Sobic001G365800 Sobic003G327100 Sobic003G327100 Sobic009G101400--Sobic003G327100 Sobic003G081700 Sobic003G081700 Sobic009G101400--Sobic003G081700 Sobic009G129900 Sobic009G129900 Sobic009G101400--Sobic009G129900 Sobic001G530500 Sobic001G530500 Sobic009G101400--Sobic001G530500 Sobic009G101400--Sobic006G269000 Sobic001G106700 Sobic001G106700 Sobic009G101400--Sobic001G106700 Sobic001G380500 Sobic001G380500 Sobic007G168200--Sobic001G380500 Sobic009G190800 Sobic009G190800 Sobic007G168200--Sobic009G190800 Sobic001G039800 Sobic001G039800 Sobic007G168200--Sobic001G039800 Sobic007G168200--Sobic001G294200 Sobic007G168200--Sobic006G269000 Sobic009G065200 Sobic009G065200 Sobic007G168200--Sobic009G065200 Sobic001G341800 Sobic001G341800 Sobic007G168200--Sobic001G341800 Sobic004G214100 Sobic004G214100 Sobic007G168200--Sobic004G214100 Sobic007G168200--Sobic003G103200 Sobic003G078800--Sobic001G294200 Sobic002G122600 Sobic002G122600 Sobic003G078800--Sobic002G122600 Sobic001G372000 Sobic001G372000 Sobic003G078800--Sobic001G372000 Sobic006G228700 Sobic006G228700 Sobic003G078800--Sobic006G228700 Sobic006G264500 Sobic006G264500 Sobic003G078800--Sobic006G264500 Sobic010G067700 Sobic010G067700 Sobic003G078800--Sobic010G067700 Sobic001G004700 Sobic001G004700 Sobic003G078800--Sobic001G004700 Sobic009G157200 Sobic009G157200 Sobic003G078800--Sobic009G157200 Sobic006G047100 Sobic006G047100 Sobic003G078800--Sobic006G047100 Sobic001G294200--Sobic003G078800 Sobic001G543300 Sobic001G543300 Sobic001G294200--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G294200--Sobic006G262900 Sobic001G512600 Sobic001G512600 Sobic001G294200--Sobic001G512600 Sobic009G133400 Sobic009G133400 Sobic001G294200--Sobic009G133400 Sobic002G129000 Sobic002G129000 Sobic001G294200--Sobic002G129000 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic003G103200--Sobic009G190800 Sobic002G137300 Sobic002G137300 Sobic003G103200--Sobic002G137300 Sobic006G024500 Sobic006G024500 Sobic003G103200--Sobic006G024500 Sobic008G081300 Sobic008G081300 Sobic003G103200--Sobic008G081300 Sobic005G044400 Sobic005G044400 Sobic003G103200--Sobic005G044400 Sobic008G193300 Sobic008G193300 Sobic003G103200--Sobic008G193300 Sobic009G141400 Sobic009G141400 Sobic003G103200--Sobic009G141400 Sobic002G181300 Sobic002G181300 Sobic003G103200--Sobic002G181300 Sobic008G144800 Sobic008G144800 Sobic003G103200--Sobic008G144800 Sobic001G479200--Sobic006G262900 Sobic004G219300 Sobic004G219300 Sobic001G479200--Sobic004G219300 Sobic001G479200--Sobic003G327100 Sobic010G091900 Sobic010G091900 Sobic001G479200--Sobic010G091900 Sobic002G134001 Sobic002G134001 Sobic001G479200--Sobic002G134001 Sobic001G459200 Sobic001G459200 Sobic001G479200--Sobic001G459200 Sobic003G337000 Sobic003G337000 Sobic001G479200--Sobic003G337000 Sobic010G121300 Sobic010G121300 Sobic001G479200--Sobic010G121300 Sobic003G124800 Sobic003G124800 Sobic001G479200--Sobic003G124800 Sobic006G269000--Sobic002G137300 Sobic006G004600 Sobic006G004600 Sobic006G269000--Sobic006G004600 Sobic006G269000--Sobic004G214100 Sobic001G072800 Sobic001G072800 Sobic006G269000--Sobic001G072800 Sobic003G261900 Sobic003G261900 Sobic006G269000--Sobic003G261900 Sobic006G269000--Sobic007G168200 Sobic002G242200 Sobic002G242200 Sobic006G269000--Sobic002G242200 Sobic006G269000--Sobic009G190800 Sobic001G417900 Sobic001G417900 Sobic006G269000--Sobic001G417900 Sobic001G136900 Sobic001G136900 Sobic001G129300--Sobic001G136900 Sobic001G129300--Sobic006G262900 Sobic001G129300--Sobic001G543300 Sobic007G126200 Sobic007G126200 Sobic001G129300--Sobic007G126200 Sobic006G183000 Sobic006G183000 Sobic001G129300--Sobic006G183000 Sobic003G250500 Sobic003G250500 Sobic001G129300--Sobic003G250500 Sobic009G033900 Sobic009G033900 Sobic001G129300--Sobic009G033900 Sobic003G226500 Sobic003G226500 Sobic001G129300--Sobic003G226500 Sobic007G167700 Sobic007G167700 Sobic001G129300--Sobic007G167700 Sobic001G208300--Sobic001G543300 Sobic001G208300--Sobic006G262900 Sobic001G208300--Sobic003G078800 Sobic001G208300--Sobic001G129300 Sobic001G208300--Sobic001G294200 Sobic009G129500 Sobic009G129500 Sobic001G208300--Sobic009G129500 Sobic001G138300 Sobic001G138300 Sobic001G208300--Sobic001G138300 Sobic001G208300--Sobic003G327100 Sobic001G208300--Sobic001G372000
Octagon: transcription factors


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