Gene annotation
Transcriptome id Sobic.006G228700.1
Synonym Sb06g029710, FER
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
TKL_IRAK_CrRLK1L-1.3 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
UniProt C5YGN6
Pfam PF11721 PF07714
Panther DB PTHR27003 PTHR27003:SF78
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G51550 : Malectin/receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os05g25450.2 : TKL_IRAK_CrRLK1L-1.3 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
MaizeGDB (Corn) Zm00025a009653
Brachypodium KQK06923 , KQK21820
Barley HORVU5Hr1G084100.2 , HORVU5Hr1G084100.3 , HORVU5Hr1G084100.1 , HORVU5Hr1G084100.6 , HORVU5Hr1G084100.4 , HORVU5Hr1G084100.5 , HORVU4Hr1G050700.1 , HORVU4Hr1G050700.2 , HORVU4Hr1G050700.3 , HORVU4Hr1G050700.4 , HORVU4Hr1G050700.5
Wheat TraesCS5B02G015200 , TraesCS3B02G086600
Populus PNT35086


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G078800 PB1 domain containing protein, expressed -
2 Sobic.001G087100 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome C, putative, expressed -
3 Sobic.001G372000 OsFBT5 - F-box and tubby domain containing protein, expressed -
4 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
5 Sobic.001G384900 hypothetical protein K09250: cellular nucleic acid-binding protein
6 Sobic.003G142700 expressed protein -
7 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
8 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
9 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
10 Sobic.006G252300 BSD domain-containing protein, putative, expressed -
11 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
12 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
13 Sobic.006G047100 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
14 Sobic.001G043400 expressed protein -
15 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
16 Sobic.009G225200 expressed protein -
17 Sobic.006G264500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.003G174800 - -
19 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
20 Sobic.003G000150 - -


Gene co-expression network
sample Sobic006G228700 Sobic006G228700 Sobic003G078800 Sobic003G078800 Sobic006G228700--Sobic003G078800 Sobic001G087100 Sobic001G087100 Sobic006G228700--Sobic001G087100 Sobic001G372000 Sobic001G372000 Sobic006G228700--Sobic001G372000 Sobic001G123000 Sobic001G123000 Sobic006G228700--Sobic001G123000 Sobic001G384900 Sobic001G384900 Sobic006G228700--Sobic001G384900 Sobic003G142700 Sobic003G142700 Sobic006G228700--Sobic003G142700 Sobic007G168200 Sobic007G168200 Sobic006G228700--Sobic007G168200 Sobic001G423100 Sobic001G423100 Sobic006G228700--Sobic001G423100 Sobic002G122600 Sobic002G122600 Sobic006G228700--Sobic002G122600 Sobic001G294200 Sobic001G294200 Sobic003G078800--Sobic001G294200 Sobic003G078800--Sobic002G122600 Sobic003G078800--Sobic001G372000 Sobic003G078800--Sobic006G228700 Sobic006G264500 Sobic006G264500 Sobic003G078800--Sobic006G264500 Sobic010G067700 Sobic010G067700 Sobic003G078800--Sobic010G067700 Sobic001G004700 Sobic001G004700 Sobic003G078800--Sobic001G004700 Sobic009G157200 Sobic009G157200 Sobic003G078800--Sobic009G157200 Sobic006G047100 Sobic006G047100 Sobic003G078800--Sobic006G047100 Sobic001G043400 Sobic001G043400 Sobic001G087100--Sobic001G043400 Sobic004G232000 Sobic004G232000 Sobic001G087100--Sobic004G232000 Sobic005G015100 Sobic005G015100 Sobic001G087100--Sobic005G015100 Sobic003G174800 Sobic003G174800 Sobic001G087100--Sobic003G174800 Sobic009G015800 Sobic009G015800 Sobic001G087100--Sobic009G015800 Sobic002G076000 Sobic002G076000 Sobic001G087100--Sobic002G076000 Sobic007G043900 Sobic007G043900 Sobic001G087100--Sobic007G043900 Sobic009G225200 Sobic009G225200 Sobic001G087100--Sobic009G225200 Sobic010G166000 Sobic010G166000 Sobic001G087100--Sobic010G166000 Sobic001G467000 Sobic001G467000 Sobic001G372000--Sobic001G467000 Sobic004G150400 Sobic004G150400 Sobic001G372000--Sobic004G150400 Sobic010G145900 Sobic010G145900 Sobic001G372000--Sobic010G145900 Sobic006G209500 Sobic006G209500 Sobic001G372000--Sobic006G209500 Sobic001G512600 Sobic001G512600 Sobic001G372000--Sobic001G512600 Sobic002G132300 Sobic002G132300 Sobic001G372000--Sobic002G132300 Sobic001G291100 Sobic001G291100 Sobic001G372000--Sobic001G291100 Sobic001G478300 Sobic001G478300 Sobic001G372000--Sobic001G478300 Sobic003G305400 Sobic003G305400 Sobic001G372000--Sobic003G305400 Sobic007G007000 Sobic007G007000 Sobic001G123000--Sobic007G007000 Sobic009G259400 Sobic009G259400 Sobic001G123000--Sobic009G259400 Sobic003G344900 Sobic003G344900 Sobic001G123000--Sobic003G344900 Sobic001G120300 Sobic001G120300 Sobic001G123000--Sobic001G120300 Sobic001G098200 Sobic001G098200 Sobic001G123000--Sobic001G098200 Sobic010G090900 Sobic010G090900 Sobic001G123000--Sobic010G090900 Sobic006G114500 Sobic006G114500 Sobic001G123000--Sobic006G114500 Sobic005G091600 Sobic005G091600 Sobic001G123000--Sobic005G091600 Sobic007G177000 Sobic007G177000 Sobic001G123000--Sobic007G177000 Sobic010G005600 Sobic010G005600 Sobic001G384900--Sobic010G005600 Sobic005G106500 Sobic005G106500 Sobic001G384900--Sobic005G106500 Sobic009G050900 Sobic009G050900 Sobic001G384900--Sobic009G050900 Sobic006G153900 Sobic006G153900 Sobic001G384900--Sobic006G153900 Sobic002G351900 Sobic002G351900 Sobic001G384900--Sobic002G351900 Sobic008G166300 Sobic008G166300 Sobic001G384900--Sobic008G166300 Sobic001G081000 Sobic001G081000 Sobic001G384900--Sobic001G081000 Sobic004G018300 Sobic004G018300 Sobic001G384900--Sobic004G018300 Sobic009G178300 Sobic009G178300 Sobic001G384900--Sobic009G178300 Sobic003G051200 Sobic003G051200 Sobic003G142700--Sobic003G051200 Sobic003G248500 Sobic003G248500 Sobic003G142700--Sobic003G248500 Sobic004G283000 Sobic004G283000 Sobic003G142700--Sobic004G283000 Sobic003G142700--Sobic009G225200 Sobic003G258900 Sobic003G258900 Sobic003G142700--Sobic003G258900 Sobic003G045400 Sobic003G045400 Sobic003G142700--Sobic003G045400 Sobic002G313500 Sobic002G313500 Sobic003G142700--Sobic002G313500 Sobic007G007900 Sobic007G007900 Sobic003G142700--Sobic007G007900 Sobic003G442000 Sobic003G442000 Sobic003G142700--Sobic003G442000 Sobic001G380500 Sobic001G380500 Sobic007G168200--Sobic001G380500 Sobic009G190800 Sobic009G190800 Sobic007G168200--Sobic009G190800 Sobic001G039800 Sobic001G039800 Sobic007G168200--Sobic001G039800 Sobic007G168200--Sobic001G294200 Sobic006G269000 Sobic006G269000 Sobic007G168200--Sobic006G269000 Sobic009G065200 Sobic009G065200 Sobic007G168200--Sobic009G065200 Sobic001G341800 Sobic001G341800 Sobic007G168200--Sobic001G341800 Sobic004G214100 Sobic004G214100 Sobic007G168200--Sobic004G214100 Sobic003G103200 Sobic003G103200 Sobic007G168200--Sobic003G103200 Sobic009G154600 Sobic009G154600 Sobic001G423100--Sobic009G154600 Sobic008G148400 Sobic008G148400 Sobic001G423100--Sobic008G148400 Sobic001G191200 Sobic001G191200 Sobic001G423100--Sobic001G191200 Sobic003G406700 Sobic003G406700 Sobic001G423100--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G423100--Sobic001G078200 Sobic001G031300 Sobic001G031300 Sobic001G423100--Sobic001G031300 Sobic006G279800 Sobic006G279800 Sobic001G423100--Sobic006G279800 Sobic010G258300 Sobic010G258300 Sobic001G423100--Sobic010G258300 Sobic003G030400 Sobic003G030400 Sobic001G423100--Sobic003G030400 Sobic001G281600 Sobic001G281600 Sobic002G122600--Sobic001G281600 Sobic009G215800 Sobic009G215800 Sobic002G122600--Sobic009G215800 Sobic010G268300 Sobic010G268300 Sobic002G122600--Sobic010G268300 Sobic002G309800 Sobic002G309800 Sobic002G122600--Sobic002G309800 Sobic004G083700 Sobic004G083700 Sobic002G122600--Sobic004G083700 Sobic001G429300 Sobic001G429300 Sobic002G122600--Sobic001G429300 Sobic002G122600--Sobic003G078800 Sobic003G196900 Sobic003G196900 Sobic002G122600--Sobic003G196900 Sobic009G017400 Sobic009G017400 Sobic002G122600--Sobic009G017400
Octagon: transcription factors


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