Gene annotation
Transcriptome id Sobic.008G076800.2,Sobic.008G076800.3,Sobic.008G076800.4,Sobic.008G076800.1
Synonym Sb08g006900
Functional annotation expressed protein
UniProt A0A1B6PCC7
Pfam PF12872 PF01936
Panther DB PTHR14379
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0010468; regulation of gene expression GO:0005777peroxisome


Orthologs (automatic annotation)
TAIR AT2G15560 : Putative endonuclease or glycosyl hydrolase
RAP-DB (Rice) LOC_Os08g13390.1,LOC_Os08g13390.2 : expressed protein
MaizeGDB (Corn) Zm00025a054465
Brachypodium PNT62784
Barley HORVU5Hr1G041090.1 , HORVU5Hr1G041090.3 , HORVU5Hr1G041090.2 , HORVU5Hr1G033960.8 , HORVU5Hr1G033960.6 , HORVU5Hr1G033960.7 , HORVU5Hr1G033960.4 , HORVU5Hr1G033960.5 , HORVU5Hr1G033960.2 , HORVU5Hr1G033960.3 , HORVU5Hr1G033960.1 , HORVU0Hr1G011750.1 , HORVU0Hr1G011750.3
Wheat -
Populus -


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cDNA sequences
Sobic.008G076800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
2 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
3 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
4 Sobic.001G207000 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
5 Sobic.003G053800 WD40-like domain containing protein, putative, expressed -
6 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
8 Sobic.001G085100 expressed protein -
9 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
10 Sobic.009G123600 tungus CG8253-PA, putative, expressed -
11 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
12 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
13 Sobic.001G120500 toc64, putative, expressed -
14 Sobic.003G169600 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
15 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
16 Sobic.002G059300 OsFBX181 - F-box domain containing protein, expressed -
17 Sobic.007G078600 YT521-B, putative, expressed -
18 Sobic.001G296900 dual specificity protein phosphatase, putative, expressed -
19 Sobic.005G172500 WD repeat-containing protein, putative, expressed K08266: MLST8, target of rapamycin complex subunit LST8
20 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase


Gene co-expression network
sample Sobic008G076800 Sobic008G076800 Sobic007G078500 Sobic007G078500 Sobic008G076800--Sobic007G078500 Sobic002G347000 Sobic002G347000 Sobic008G076800--Sobic002G347000 Sobic010G265300 Sobic010G265300 Sobic008G076800--Sobic010G265300 Sobic001G207000 Sobic001G207000 Sobic008G076800--Sobic001G207000 Sobic003G053800 Sobic003G053800 Sobic008G076800--Sobic003G053800 Sobic001G121200 Sobic001G121200 Sobic008G076800--Sobic001G121200 Sobic010G251000 Sobic010G251000 Sobic008G076800--Sobic010G251000 Sobic001G085100 Sobic001G085100 Sobic008G076800--Sobic001G085100 Sobic001G281600 Sobic001G281600 Sobic008G076800--Sobic001G281600 Sobic007G078500--Sobic001G281600 Sobic007G078600 Sobic007G078600 Sobic007G078500--Sobic007G078600 Sobic004G121100 Sobic004G121100 Sobic007G078500--Sobic004G121100 Sobic009G179700 Sobic009G179700 Sobic007G078500--Sobic009G179700 Sobic008G179700 Sobic008G179700 Sobic007G078500--Sobic008G179700 Sobic007G078500--Sobic008G076800 Sobic001G080700 Sobic001G080700 Sobic007G078500--Sobic001G080700 Sobic010G279700 Sobic010G279700 Sobic007G078500--Sobic010G279700 Sobic001G375700 Sobic001G375700 Sobic007G078500--Sobic001G375700 Sobic003G143200 Sobic003G143200 Sobic002G347000--Sobic003G143200 Sobic005G160400 Sobic005G160400 Sobic002G347000--Sobic005G160400 Sobic001G309400 Sobic001G309400 Sobic002G347000--Sobic001G309400 Sobic006G180000 Sobic006G180000 Sobic002G347000--Sobic006G180000 Sobic007G115200 Sobic007G115200 Sobic002G347000--Sobic007G115200 Sobic006G199200 Sobic006G199200 Sobic002G347000--Sobic006G199200 Sobic007G167900 Sobic007G167900 Sobic002G347000--Sobic007G167900 Sobic002G347000--Sobic001G281600 Sobic002G347000--Sobic008G076800 Sobic001G120500 Sobic001G120500 Sobic010G265300--Sobic001G120500 Sobic010G265300--Sobic005G160400 Sobic010G092300 Sobic010G092300 Sobic010G265300--Sobic010G092300 Sobic005G172500 Sobic005G172500 Sobic010G265300--Sobic005G172500 Sobic010G265300--Sobic008G076800 Sobic004G092500 Sobic004G092500 Sobic010G265300--Sobic004G092500 Sobic007G084100 Sobic007G084100 Sobic010G265300--Sobic007G084100 Sobic004G257100 Sobic004G257100 Sobic010G265300--Sobic004G257100 Sobic001G226700 Sobic001G226700 Sobic010G265300--Sobic001G226700 Sobic006G041600 Sobic006G041600 Sobic001G207000--Sobic006G041600 Sobic009G044800 Sobic009G044800 Sobic001G207000--Sobic009G044800 Sobic002G045600 Sobic002G045600 Sobic001G207000--Sobic002G045600 Sobic007G105100 Sobic007G105100 Sobic001G207000--Sobic007G105100 Sobic001G194200 Sobic001G194200 Sobic001G207000--Sobic001G194200 Sobic008G118200 Sobic008G118200 Sobic001G207000--Sobic008G118200 Sobic003G195000 Sobic003G195000 Sobic001G207000--Sobic003G195000 Sobic008G089100 Sobic008G089100 Sobic001G207000--Sobic008G089100 Sobic010G123600 Sobic010G123600 Sobic001G207000--Sobic010G123600 Sobic001G296900 Sobic001G296900 Sobic003G053800--Sobic001G296900 Sobic002G105200 Sobic002G105200 Sobic003G053800--Sobic002G105200 Sobic010G020300 Sobic010G020300 Sobic003G053800--Sobic010G020300 Sobic003G053800--Sobic001G085100 Sobic001G124200 Sobic001G124200 Sobic003G053800--Sobic001G124200 Sobic001G161900 Sobic001G161900 Sobic003G053800--Sobic001G161900 Sobic010G164000 Sobic010G164000 Sobic003G053800--Sobic010G164000 Sobic003G053800--Sobic008G076800 Sobic002G303600 Sobic002G303600 Sobic003G053800--Sobic002G303600 Sobic001G390800 Sobic001G390800 Sobic001G121200--Sobic001G390800 Sobic010G205800 Sobic010G205800 Sobic001G121200--Sobic010G205800 Sobic001G268200 Sobic001G268200 Sobic001G121200--Sobic001G268200 Sobic009G113000 Sobic009G113000 Sobic001G121200--Sobic009G113000 Sobic002G111000 Sobic002G111000 Sobic001G121200--Sobic002G111000 Sobic010G147100 Sobic010G147100 Sobic001G121200--Sobic010G147100 Sobic001G121200--Sobic001G207000 Sobic001G146800 Sobic001G146800 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic001G007000 Sobic001G007000 Sobic010G251000--Sobic001G007000 Sobic010G251000--Sobic001G080700 Sobic006G200600 Sobic006G200600 Sobic010G251000--Sobic006G200600 Sobic004G066200 Sobic004G066200 Sobic010G251000--Sobic004G066200 Sobic010G251000--Sobic004G121100 Sobic001G392300 Sobic001G392300 Sobic010G251000--Sobic001G392300 Sobic001G047400 Sobic001G047400 Sobic010G251000--Sobic001G047400 Sobic004G353200 Sobic004G353200 Sobic010G251000--Sobic004G353200 Sobic008G046500 Sobic008G046500 Sobic010G251000--Sobic008G046500 Sobic006G101700 Sobic006G101700 Sobic001G085100--Sobic006G101700 Sobic001G261436 Sobic001G261436 Sobic001G085100--Sobic001G261436 Sobic006G148200 Sobic006G148200 Sobic001G085100--Sobic006G148200 Sobic001G085100--Sobic007G167900 Sobic001G206900 Sobic001G206900 Sobic001G085100--Sobic001G206900 Sobic001G085100--Sobic001G047400 Sobic001G085100--Sobic004G066200 Sobic001G091300 Sobic001G091300 Sobic001G085100--Sobic001G091300 Sobic003G012200 Sobic003G012200 Sobic001G085100--Sobic003G012200 Sobic001G281600--Sobic010G279700 Sobic001G281600--Sobic007G078500 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic001G281600--Sobic008G179700
Octagon: transcription factors


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