Gene annotation
Transcriptome id Sobic.001G106600.2,Sobic.001G106600.1
Synonym Sb01g009520
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
membrane protein, putative, expressed
UniProt C5WM22
Pfam PF01925
Panther DB PTHR14255 PTHR14255:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G36630 : Sulfite exporter TauE/SafE family protein
RAP-DB (Rice) LOC_Os03g51650.1 : membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a007969
Brachypodium KQK13433
Barley HORVU4Hr1G009560.2 , HORVU4Hr1G009560.3 , HORVU4Hr1G009560.1 , HORVU4Hr1G009560.6 , HORVU4Hr1G009560.7 , HORVU4Hr1G009560.4 , HORVU4Hr1G009560.5
Wheat TraesCS4B02G057200 , TraesCS4B02G057200 , TraesCS4D02G057400 , TraesCS4A02G257400 , TraesCS4A02G257400 , TraesCS4A02G257400
Populus -


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cDNA sequences
Sobic.001G106600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
2 Sobic.001G159400 protein kinase domain containing protein, expressed -
3 Sobic.003G081700 OsWAK1 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
4 Sobic.006G225900 expressed protein -
5 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
6 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
7 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
8 Sobic.001G079200 STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
9 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.010G175500 expressed protein -
11 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
12 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
13 Sobic.008G076800 expressed protein -
14 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.001G000200 TBC domain containing protein, expressed -
16 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.006G199200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
18 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.005G086100 glutathione S-transferase, N-terminal domain containing protein, expressed K01800: maiA, maleylacetoacetate isomerase
20 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2


Gene co-expression network
sample Sobic001G106600 Sobic001G106600 Sobic009G017400 Sobic009G017400 Sobic001G106600--Sobic009G017400 Sobic001G159400 Sobic001G159400 Sobic001G106600--Sobic001G159400 Sobic003G081700 Sobic003G081700 Sobic001G106600--Sobic003G081700 Sobic006G225900 Sobic006G225900 Sobic001G106600--Sobic006G225900 Sobic010G205800 Sobic010G205800 Sobic001G106600--Sobic010G205800 Sobic004G358600 Sobic004G358600 Sobic001G106600--Sobic004G358600 Sobic002G276100 Sobic002G276100 Sobic001G106600--Sobic002G276100 Sobic001G079200 Sobic001G079200 Sobic001G106600--Sobic001G079200 Sobic005G044800 Sobic005G044800 Sobic001G106600--Sobic005G044800 Sobic006G199200 Sobic006G199200 Sobic009G017400--Sobic006G199200 Sobic001G493200 Sobic001G493200 Sobic009G017400--Sobic001G493200 Sobic004G021200 Sobic004G021200 Sobic009G017400--Sobic004G021200 Sobic009G017400--Sobic002G276100 Sobic001G281600 Sobic001G281600 Sobic009G017400--Sobic001G281600 Sobic003G266001 Sobic003G266001 Sobic009G017400--Sobic003G266001 Sobic002G313400 Sobic002G313400 Sobic009G017400--Sobic002G313400 Sobic002G122600 Sobic002G122600 Sobic009G017400--Sobic002G122600 Sobic009G017400--Sobic010G205800 Sobic003G381200 Sobic003G381200 Sobic001G159400--Sobic003G381200 Sobic003G138500 Sobic003G138500 Sobic001G159400--Sobic003G138500 Sobic001G090500 Sobic001G090500 Sobic001G159400--Sobic001G090500 Sobic010G256700 Sobic010G256700 Sobic001G159400--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic001G159400--Sobic007G193700 Sobic001G159400--Sobic002G276100 Sobic003G396200 Sobic003G396200 Sobic001G159400--Sobic003G396200 Sobic004G181700 Sobic004G181700 Sobic001G159400--Sobic004G181700 Sobic004G317100 Sobic004G317100 Sobic001G159400--Sobic004G317100 Sobic008G146900 Sobic008G146900 Sobic003G081700--Sobic008G146900 Sobic003G081700--Sobic001G159400 Sobic002G137000 Sobic002G137000 Sobic003G081700--Sobic002G137000 Sobic003G081700--Sobic004G181700 Sobic010G184600 Sobic010G184600 Sobic003G081700--Sobic010G184600 Sobic001G530500 Sobic001G530500 Sobic003G081700--Sobic001G530500 Sobic003G081700--Sobic001G106600 Sobic004G181600 Sobic004G181600 Sobic003G081700--Sobic004G181600 Sobic001G072700 Sobic001G072700 Sobic003G081700--Sobic001G072700 Sobic003G086900 Sobic003G086900 Sobic006G225900--Sobic003G086900 Sobic004G174200 Sobic004G174200 Sobic006G225900--Sobic004G174200 Sobic001G375100 Sobic001G375100 Sobic006G225900--Sobic001G375100 Sobic004G291900 Sobic004G291900 Sobic006G225900--Sobic004G291900 Sobic009G110000 Sobic009G110000 Sobic006G225900--Sobic009G110000 Sobic001G390800 Sobic001G390800 Sobic006G225900--Sobic001G390800 Sobic001G268200 Sobic001G268200 Sobic006G225900--Sobic001G268200 Sobic001G016700 Sobic001G016700 Sobic006G225900--Sobic001G016700 Sobic002G411600 Sobic002G411600 Sobic006G225900--Sobic002G411600 Sobic001G121200 Sobic001G121200 Sobic010G205800--Sobic001G121200 Sobic010G205800--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic010G205800--Sobic001G124200 Sobic001G007000 Sobic001G007000 Sobic010G205800--Sobic001G007000 Sobic001G000200 Sobic001G000200 Sobic010G205800--Sobic001G000200 Sobic002G262900 Sobic002G262900 Sobic010G205800--Sobic002G262900 Sobic004G274200 Sobic004G274200 Sobic010G205800--Sobic004G274200 Sobic010G205800--Sobic006G199200 Sobic010G205800--Sobic001G079200 Sobic004G358600--Sobic005G044800 Sobic003G012200 Sobic003G012200 Sobic004G358600--Sobic003G012200 Sobic004G358600--Sobic001G000200 Sobic004G358600--Sobic010G205800 Sobic010G002400 Sobic010G002400 Sobic004G358600--Sobic010G002400 Sobic008G004600 Sobic008G004600 Sobic004G358600--Sobic008G004600 Sobic002G361300 Sobic002G361300 Sobic004G358600--Sobic002G361300 Sobic003G372000 Sobic003G372000 Sobic004G358600--Sobic003G372000 Sobic009G199200 Sobic009G199200 Sobic004G358600--Sobic009G199200 Sobic002G276100--Sobic003G381200 Sobic004G026500 Sobic004G026500 Sobic002G276100--Sobic004G026500 Sobic002G276100--Sobic004G181700 Sobic002G276100--Sobic001G159400 Sobic010G138000 Sobic010G138000 Sobic002G276100--Sobic010G138000 Sobic002G168500 Sobic002G168500 Sobic002G276100--Sobic002G168500 Sobic009G193500 Sobic009G193500 Sobic002G276100--Sobic009G193500 Sobic008G172300 Sobic008G172300 Sobic002G276100--Sobic008G172300 Sobic002G276100--Sobic001G268200 Sobic001G079200--Sobic001G390800 Sobic001G079200--Sobic010G205800 Sobic003G233600 Sobic003G233600 Sobic001G079200--Sobic003G233600 Sobic001G241100 Sobic001G241100 Sobic001G079200--Sobic001G241100 Sobic006G126100 Sobic006G126100 Sobic001G079200--Sobic006G126100 Sobic001G079200--Sobic001G007000 Sobic003G273600 Sobic003G273600 Sobic001G079200--Sobic003G273600 Sobic003G169600 Sobic003G169600 Sobic001G079200--Sobic003G169600 Sobic001G079200--Sobic001G000200 Sobic005G044800--Sobic004G358600 Sobic005G044800--Sobic003G012200 Sobic005G044800--Sobic003G372000 Sobic006G244700 Sobic006G244700 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700
Octagon: transcription factors


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