Gene annotation
Transcriptome id Sobic.004G295300.1
Synonym Sb04g032920
Functional annotation expressed protein
UniProt A0A194YS72
Pfam -
Panther DB PTHR33625 PTHR33625:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25170 : Uncharacterised conserved protein (UCP012943)
RAP-DB (Rice) LOC_Os02g44010.1 : expressed protein
MaizeGDB (Corn) Zm00025a032204 , Zm00025a020880
Brachypodium PNT69173 , PNT69172 , KQK00609 , KQK00610
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G339500 expressed protein -
2 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -
3 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -
4 Sobic.002G339600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
5 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
6 Sobic.006G215600 SHR5-receptor-like kinase, putative, expressed -
7 Sobic.003G218900 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.001G418700 SLT1 protein, putative, expressed -
9 Sobic.003G081700 OsWAK1 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
10 Sobic.004G116000 expressed protein -
11 Sobic.006G205100 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.007G150100 HD domain containing protein, putative, expressed -
13 Sobic.001G072700 expressed protein -
14 Sobic.003G319800 bHelix-loop-helix transcription factor, putative, expressed -
15 Sobic.004G151500 AP2 domain containing protein, expressed -
16 Sobic.003G370900 expressed protein -
17 Sobic.009G084500 ethylene-responsive protein related, putative, expressed -
18 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
19 Sobic.002G421900 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
20 Sobic.001G097100 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase


Gene co-expression network
sample Sobic004G295300 Sobic004G295300 Sobic001G339500 Sobic001G339500 Sobic004G295300--Sobic001G339500 Sobic003G370700 Sobic003G370700 Sobic004G295300--Sobic003G370700 Sobic007G033800 Sobic007G033800 Sobic004G295300--Sobic007G033800 Sobic002G339600 Sobic002G339600 Sobic004G295300--Sobic002G339600 Sobic005G100600 Sobic005G100600 Sobic004G295300--Sobic005G100600 Sobic006G215600 Sobic006G215600 Sobic004G295300--Sobic006G215600 Sobic003G218900 Sobic003G218900 Sobic004G295300--Sobic003G218900 Sobic001G418700 Sobic001G418700 Sobic004G295300--Sobic001G418700 Sobic003G081700 Sobic003G081700 Sobic004G295300--Sobic003G081700 Sobic001G339500--Sobic002G339600 Sobic002G111200 Sobic002G111200 Sobic001G339500--Sobic002G111200 Sobic003G349200 Sobic003G349200 Sobic001G339500--Sobic003G349200 Sobic001G339500--Sobic006G215600 Sobic001G339500--Sobic004G295300 Sobic001G339500--Sobic007G033800 Sobic006G011300 Sobic006G011300 Sobic001G339500--Sobic006G011300 Sobic003G224100 Sobic003G224100 Sobic001G339500--Sobic003G224100 Sobic006G130800 Sobic006G130800 Sobic001G339500--Sobic006G130800 Sobic006G133900 Sobic006G133900 Sobic003G370700--Sobic006G133900 Sobic001G333800 Sobic001G333800 Sobic003G370700--Sobic001G333800 Sobic002G104100 Sobic002G104100 Sobic003G370700--Sobic002G104100 Sobic004G181600 Sobic004G181600 Sobic003G370700--Sobic004G181600 Sobic003G229300 Sobic003G229300 Sobic003G370700--Sobic003G229300 Sobic003G191700 Sobic003G191700 Sobic003G370700--Sobic003G191700 Sobic009G038900 Sobic009G038900 Sobic003G370700--Sobic009G038900 Sobic005G106600 Sobic005G106600 Sobic003G370700--Sobic005G106600 Sobic007G198300 Sobic007G198300 Sobic003G370700--Sobic007G198300 Sobic005G033200 Sobic005G033200 Sobic007G033800--Sobic005G033200 Sobic007G033800--Sobic001G339500 Sobic010G023700 Sobic010G023700 Sobic007G033800--Sobic010G023700 Sobic001G031100 Sobic001G031100 Sobic007G033800--Sobic001G031100 Sobic006G173600 Sobic006G173600 Sobic007G033800--Sobic006G173600 Sobic007G033800--Sobic002G339600 Sobic001G071800 Sobic001G071800 Sobic007G033800--Sobic001G071800 Sobic007G033800--Sobic002G111200 Sobic002G421900 Sobic002G421900 Sobic007G033800--Sobic002G421900 Sobic002G339600--Sobic001G339500 Sobic002G339600--Sobic006G215600 Sobic002G339600--Sobic002G111200 Sobic003G443500 Sobic003G443500 Sobic002G339600--Sobic003G443500 Sobic002G128900 Sobic002G128900 Sobic002G339600--Sobic002G128900 Sobic004G151500 Sobic004G151500 Sobic002G339600--Sobic004G151500 Sobic001G257700 Sobic001G257700 Sobic002G339600--Sobic001G257700 Sobic002G309900 Sobic002G309900 Sobic002G339600--Sobic002G309900 Sobic002G339600--Sobic007G033800 Sobic006G092000 Sobic006G092000 Sobic005G100600--Sobic006G092000 Sobic007G136800 Sobic007G136800 Sobic005G100600--Sobic007G136800 Sobic001G085600 Sobic001G085600 Sobic005G100600--Sobic001G085600 Sobic003G110800 Sobic003G110800 Sobic005G100600--Sobic003G110800 Sobic001G465700 Sobic001G465700 Sobic005G100600--Sobic001G465700 Sobic006G038500 Sobic006G038500 Sobic005G100600--Sobic006G038500 Sobic005G100600--Sobic006G173600 Sobic001G261545 Sobic001G261545 Sobic005G100600--Sobic001G261545 Sobic002G091600 Sobic002G091600 Sobic005G100600--Sobic002G091600 Sobic006G215600--Sobic004G151500 Sobic006G215600--Sobic001G339500 Sobic006G215600--Sobic002G339600 Sobic006G215600--Sobic002G421900 Sobic006G215600--Sobic003G349200 Sobic006G215600--Sobic003G224100 Sobic003G014300 Sobic003G014300 Sobic006G215600--Sobic003G014300 Sobic006G258700 Sobic006G258700 Sobic006G215600--Sobic006G258700 Sobic010G269400 Sobic010G269400 Sobic006G215600--Sobic010G269400 Sobic001G097100 Sobic001G097100 Sobic003G218900--Sobic001G097100 Sobic004G054100 Sobic004G054100 Sobic003G218900--Sobic004G054100 Sobic003G354600 Sobic003G354600 Sobic003G218900--Sobic003G354600 Sobic003G218900--Sobic002G339600 Sobic003G218900--Sobic002G091600 Sobic010G205100 Sobic010G205100 Sobic003G218900--Sobic010G205100 Sobic001G136800 Sobic001G136800 Sobic003G218900--Sobic001G136800 Sobic003G218900--Sobic002G309900 Sobic006G120500 Sobic006G120500 Sobic003G218900--Sobic006G120500 Sobic001G433000 Sobic001G433000 Sobic001G418700--Sobic001G433000 Sobic001G418700--Sobic007G136800 Sobic001G065600 Sobic001G065600 Sobic001G418700--Sobic001G065600 Sobic003G003600 Sobic003G003600 Sobic001G418700--Sobic003G003600 Sobic004G174400 Sobic004G174400 Sobic001G418700--Sobic004G174400 Sobic003G442700 Sobic003G442700 Sobic001G418700--Sobic003G442700 Sobic001G073900 Sobic001G073900 Sobic001G418700--Sobic001G073900 Sobic003G343500 Sobic003G343500 Sobic001G418700--Sobic003G343500 Sobic003G396200 Sobic003G396200 Sobic001G418700--Sobic003G396200 Sobic008G146900 Sobic008G146900 Sobic003G081700--Sobic008G146900 Sobic001G159400 Sobic001G159400 Sobic003G081700--Sobic001G159400 Sobic002G137000 Sobic002G137000 Sobic003G081700--Sobic002G137000 Sobic004G181700 Sobic004G181700 Sobic003G081700--Sobic004G181700 Sobic010G184600 Sobic010G184600 Sobic003G081700--Sobic010G184600 Sobic001G530500 Sobic001G530500 Sobic003G081700--Sobic001G530500 Sobic001G106600 Sobic001G106600 Sobic003G081700--Sobic001G106600 Sobic003G081700--Sobic004G181600 Sobic001G072700 Sobic001G072700 Sobic003G081700--Sobic001G072700
Octagon: transcription factors


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