Gene annotation
Transcriptome id Sobic.001G418700.1,Sobic.001G418700.2
Synonym SLT1, Sb01g039400
Functional annotation SLT1 protein, putative, expressed
UniProt A0A1B6QP36
Pfam -
Panther DB PTHR33981 PTHR33981:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37570 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os03g16910.1 : SLT1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a052748 , Zm00025a001867 , Zm00025a026919
Brachypodium KQK22322 , KQK10508
Barley HORVU3Hr1G086480.3 , HORVU3Hr1G086480.1 , HORVU3Hr1G086480.7 , HORVU3Hr1G086480.6 , HORVU3Hr1G086480.5 , HORVU3Hr1G086480.4 , HORVU3Hr1G086480.9 , HORVU3Hr1G086480.8 , HORVU3Hr1G086480.13 , HORVU3Hr1G086480.12 , HORVU3Hr1G086480.11 , HORVU3Hr1G086480.10 , HORVU3Hr1G086480.17 , HORVU3Hr1G086480.16 , HORVU3Hr1G086480.15 , HORVU3Hr1G086480.14 , HORVU4Hr1G059250.1 , HORVU4Hr1G059250.3 , HORVU4Hr1G059250.2 , HORVU4Hr1G059250.5 , HORVU4Hr1G059250.4
Wheat -
Populus PNT22901 , PNT17747 , PNT17746


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cDNA sequences
Sobic.001G418700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G433000 FAR1 family protein, expressed -
2 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
3 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
4 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
5 Sobic.004G174400 ZOS2-09 - C2H2 zinc finger protein, expressed -
6 Sobic.003G442700 - -
7 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
8 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
9 Sobic.003G396200 expressed protein K13146: integrator complex subunit 9
10 Sobic.001G159400 protein kinase domain containing protein, expressed -
11 Sobic.004G359700 - -
12 Sobic.010G176550 - -
13 Sobic.003G110800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
14 Sobic.006G031800 - -
15 Sobic.005G188600 - -
16 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
17 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
18 Sobic.001G100100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@GATA transcription factor 25, putative, expressed -
19 Sobic.010G184600 Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
20 Sobic.003G108600 heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic001G418700 Sobic001G418700 Sobic001G433000 Sobic001G433000 Sobic001G418700--Sobic001G433000 Sobic007G136800 Sobic007G136800 Sobic001G418700--Sobic007G136800 Sobic001G065600 Sobic001G065600 Sobic001G418700--Sobic001G065600 Sobic003G003600 Sobic003G003600 Sobic001G418700--Sobic003G003600 Sobic004G174400 Sobic004G174400 Sobic001G418700--Sobic004G174400 Sobic003G442700 Sobic003G442700 Sobic001G418700--Sobic003G442700 Sobic001G073900 Sobic001G073900 Sobic001G418700--Sobic001G073900 Sobic003G343500 Sobic003G343500 Sobic001G418700--Sobic003G343500 Sobic003G396200 Sobic003G396200 Sobic001G418700--Sobic003G396200 Sobic001G433000--Sobic001G418700 Sobic004G034800 Sobic004G034800 Sobic001G433000--Sobic004G034800 Sobic001G433000--Sobic003G396200 Sobic007G116200 Sobic007G116200 Sobic001G433000--Sobic007G116200 Sobic001G433000--Sobic003G442700 Sobic010G256700 Sobic010G256700 Sobic001G433000--Sobic010G256700 Sobic002G127550 Sobic002G127550 Sobic001G433000--Sobic002G127550 Sobic004G354200 Sobic004G354200 Sobic001G433000--Sobic004G354200 Sobic002G029900 Sobic002G029900 Sobic001G433000--Sobic002G029900 Sobic003G398700 Sobic003G398700 Sobic007G136800--Sobic003G398700 Sobic010G126000 Sobic010G126000 Sobic007G136800--Sobic010G126000 Sobic003G168100 Sobic003G168100 Sobic007G136800--Sobic003G168100 Sobic001G375700 Sobic001G375700 Sobic007G136800--Sobic001G375700 Sobic006G031800 Sobic006G031800 Sobic007G136800--Sobic006G031800 Sobic005G100600 Sobic005G100600 Sobic007G136800--Sobic005G100600 Sobic001G043800 Sobic001G043800 Sobic007G136800--Sobic001G043800 Sobic003G011300 Sobic003G011300 Sobic007G136800--Sobic003G011300 Sobic010G032900 Sobic010G032900 Sobic007G136800--Sobic010G032900 Sobic001G158900 Sobic001G158900 Sobic001G065600--Sobic001G158900 Sobic001G065600--Sobic001G073900 Sobic005G188600 Sobic005G188600 Sobic001G065600--Sobic005G188600 Sobic006G010900 Sobic006G010900 Sobic001G065600--Sobic006G010900 Sobic008G094000 Sobic008G094000 Sobic001G065600--Sobic008G094000 Sobic001G484400 Sobic001G484400 Sobic001G065600--Sobic001G484400 Sobic002G036000 Sobic002G036000 Sobic001G065600--Sobic002G036000 Sobic001G003200 Sobic001G003200 Sobic001G065600--Sobic001G003200 Sobic001G065600--Sobic003G003600 Sobic003G003600--Sobic001G065600 Sobic003G003600--Sobic001G073900 Sobic003G003600--Sobic003G442700 Sobic004G001300 Sobic004G001300 Sobic003G003600--Sobic004G001300 Sobic003G003600--Sobic001G418700 Sobic003G161000 Sobic003G161000 Sobic003G003600--Sobic003G161000 Sobic008G001000 Sobic008G001000 Sobic003G003600--Sobic008G001000 Sobic003G003600--Sobic001G158900 Sobic002G385700 Sobic002G385700 Sobic003G003600--Sobic002G385700 Sobic007G108500 Sobic007G108500 Sobic004G174400--Sobic007G108500 Sobic004G164400 Sobic004G164400 Sobic004G174400--Sobic004G164400 Sobic006G228500 Sobic006G228500 Sobic004G174400--Sobic006G228500 Sobic004G174400--Sobic007G136800 Sobic004G174400--Sobic001G375700 Sobic001G035900 Sobic001G035900 Sobic004G174400--Sobic001G035900 Sobic002G031400 Sobic002G031400 Sobic004G174400--Sobic002G031400 Sobic010G176550 Sobic010G176550 Sobic004G174400--Sobic010G176550 Sobic010G005600 Sobic010G005600 Sobic004G174400--Sobic010G005600 Sobic001G465700 Sobic001G465700 Sobic003G442700--Sobic001G465700 Sobic004G235600 Sobic004G235600 Sobic003G442700--Sobic004G235600 Sobic008G001900 Sobic008G001900 Sobic003G442700--Sobic008G001900 Sobic003G332700 Sobic003G332700 Sobic003G442700--Sobic003G332700 Sobic009G121000 Sobic009G121000 Sobic003G442700--Sobic009G121000 Sobic002G042500 Sobic002G042500 Sobic003G442700--Sobic002G042500 Sobic001G060401 Sobic001G060401 Sobic003G442700--Sobic001G060401 Sobic003G442700--Sobic004G001300 Sobic003G442700--Sobic001G073900 Sobic001G073900--Sobic003G332700 Sobic001G073900--Sobic008G001900 Sobic008G117000 Sobic008G117000 Sobic001G073900--Sobic008G117000 Sobic003G342100 Sobic003G342100 Sobic001G073900--Sobic003G342100 Sobic001G073900--Sobic001G065600 Sobic001G531500 Sobic001G531500 Sobic001G073900--Sobic001G531500 Sobic005G001700 Sobic005G001700 Sobic001G073900--Sobic005G001700 Sobic001G073900--Sobic004G235600 Sobic002G049600 Sobic002G049600 Sobic001G073900--Sobic002G049600 Sobic001G512500 Sobic001G512500 Sobic003G343500--Sobic001G512500 Sobic006G133900 Sobic006G133900 Sobic003G343500--Sobic006G133900 Sobic003G343500--Sobic001G065600 Sobic006G065600 Sobic006G065600 Sobic003G343500--Sobic006G065600 Sobic007G167100 Sobic007G167100 Sobic003G343500--Sobic007G167100 Sobic003G370700 Sobic003G370700 Sobic003G343500--Sobic003G370700 Sobic002G193100 Sobic002G193100 Sobic003G343500--Sobic002G193100 Sobic010G176200 Sobic010G176200 Sobic003G343500--Sobic010G176200 Sobic010G058200 Sobic010G058200 Sobic003G343500--Sobic010G058200 Sobic003G396200--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic003G396200--Sobic007G193700 Sobic001G159400 Sobic001G159400 Sobic003G396200--Sobic001G159400 Sobic003G396200--Sobic007G116200 Sobic006G131500 Sobic006G131500 Sobic003G396200--Sobic006G131500 Sobic003G396200--Sobic002G127550 Sobic004G209600 Sobic004G209600 Sobic003G396200--Sobic004G209600 Sobic001G375100 Sobic001G375100 Sobic003G396200--Sobic001G375100 Sobic006G216800 Sobic006G216800 Sobic003G396200--Sobic006G216800
Octagon: transcription factors


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