Gene annotation
Transcriptome id Sobic.001G433000.2,Sobic.001G433000.1,Sobic.001G433000.3,Sobic.001G433000.4
Synonym FRS12, Sb01g040730
Functional annotation FAR1 family protein, expressed
UniProt A0A1Z5SAQ5 , A0A1B6QPB6 , A0A1Z5SAV4 , A0A1B6QPC8
Pfam PF03101
Panther DB PTHR31669
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT5G18960 : FAR1-related sequence 12
RAP-DB (Rice) LOC_Os03g15040.1 : FAR1 family protein, expressed
MaizeGDB (Corn) Zm00025a001642
Brachypodium KQK22512
Barley HORVU4Hr1G062460.8 , HORVU4Hr1G062460.9 , HORVU4Hr1G062460.4 , HORVU4Hr1G062460.5 , HORVU4Hr1G062460.6 , HORVU4Hr1G062460.7 , HORVU4Hr1G062460.1 , HORVU4Hr1G062460.2 , HORVU4Hr1G062460.3 , HORVU4Hr1G062460.18 , HORVU4Hr1G062460.19 , HORVU4Hr1G062460.16 , HORVU4Hr1G062460.17 , HORVU4Hr1G062460.14 , HORVU4Hr1G062460.15 , HORVU4Hr1G062460.11 , HORVU4Hr1G062460.12 , HORVU4Hr1G062460.13 , HORVU4Hr1G062460.10 , HORVU4Hr1G062460.27 , HORVU4Hr1G062460.26 , HORVU4Hr1G062460.25 , HORVU4Hr1G062460.24 , HORVU4Hr1G062460.23 , HORVU4Hr1G062460.22 , HORVU4Hr1G062460.21 , HORVU4Hr1G062460.20 , HORVU4Hr1G062460.29 , HORVU4Hr1G062460.28 , HORVU4Hr1G062460.34 , HORVU4Hr1G062460.30 , HORVU4Hr1G062460.31 , HORVU4Hr1G062460.32 , HORVU4Hr1G062460.33
Wheat -
Populus -


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cDNA sequences
Sobic.001G433000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G418700 SLT1 protein, putative, expressed -
2 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
3 Sobic.003G396200 expressed protein K13146: integrator complex subunit 9
4 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
5 Sobic.003G442700 - -
6 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.002G127550 - -
8 Sobic.004G354200 expressed protein -
9 Sobic.002G029900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.001G159400 protein kinase domain containing protein, expressed -
11 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
12 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
13 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
14 Sobic.001G100100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@GATA transcription factor 25, putative, expressed -
15 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
16 Sobic.001G198400 mutS domain V family protein, expressed -
17 Sobic.003G011300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
18 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
19 Sobic.001G420400 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase
20 Sobic.010G176550 - -


Gene co-expression network
sample Sobic001G433000 Sobic001G433000 Sobic001G418700 Sobic001G418700 Sobic001G433000--Sobic001G418700 Sobic004G034800 Sobic004G034800 Sobic001G433000--Sobic004G034800 Sobic003G396200 Sobic003G396200 Sobic001G433000--Sobic003G396200 Sobic007G116200 Sobic007G116200 Sobic001G433000--Sobic007G116200 Sobic003G442700 Sobic003G442700 Sobic001G433000--Sobic003G442700 Sobic010G256700 Sobic010G256700 Sobic001G433000--Sobic010G256700 Sobic002G127550 Sobic002G127550 Sobic001G433000--Sobic002G127550 Sobic004G354200 Sobic004G354200 Sobic001G433000--Sobic004G354200 Sobic002G029900 Sobic002G029900 Sobic001G433000--Sobic002G029900 Sobic001G418700--Sobic001G433000 Sobic007G136800 Sobic007G136800 Sobic001G418700--Sobic007G136800 Sobic001G065600 Sobic001G065600 Sobic001G418700--Sobic001G065600 Sobic003G003600 Sobic003G003600 Sobic001G418700--Sobic003G003600 Sobic004G174400 Sobic004G174400 Sobic001G418700--Sobic004G174400 Sobic001G418700--Sobic003G442700 Sobic001G073900 Sobic001G073900 Sobic001G418700--Sobic001G073900 Sobic003G343500 Sobic003G343500 Sobic001G418700--Sobic003G343500 Sobic001G418700--Sobic003G396200 Sobic006G216100 Sobic006G216100 Sobic004G034800--Sobic006G216100 Sobic010G176550 Sobic010G176550 Sobic004G034800--Sobic010G176550 Sobic003G138500 Sobic003G138500 Sobic004G034800--Sobic003G138500 Sobic004G034800--Sobic002G127550 Sobic003G052200 Sobic003G052200 Sobic004G034800--Sobic003G052200 Sobic001G035900 Sobic001G035900 Sobic004G034800--Sobic001G035900 Sobic004G034800--Sobic007G116200 Sobic008G162900 Sobic008G162900 Sobic004G034800--Sobic008G162900 Sobic010G243900 Sobic010G243900 Sobic004G034800--Sobic010G243900 Sobic003G396200--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic003G396200--Sobic007G193700 Sobic001G159400 Sobic001G159400 Sobic003G396200--Sobic001G159400 Sobic003G396200--Sobic007G116200 Sobic006G131500 Sobic006G131500 Sobic003G396200--Sobic006G131500 Sobic003G396200--Sobic002G127550 Sobic004G209600 Sobic004G209600 Sobic003G396200--Sobic004G209600 Sobic001G375100 Sobic001G375100 Sobic003G396200--Sobic001G375100 Sobic006G216800 Sobic006G216800 Sobic003G396200--Sobic006G216800 Sobic007G116200--Sobic006G216800 Sobic010G010700 Sobic010G010700 Sobic007G116200--Sobic010G010700 Sobic002G134200 Sobic002G134200 Sobic007G116200--Sobic002G134200 Sobic006G182900 Sobic006G182900 Sobic007G116200--Sobic006G182900 Sobic004G359800 Sobic004G359800 Sobic007G116200--Sobic004G359800 Sobic010G139000 Sobic010G139000 Sobic007G116200--Sobic010G139000 Sobic007G116200--Sobic010G256700 Sobic007G116200--Sobic004G209600 Sobic003G280800 Sobic003G280800 Sobic007G116200--Sobic003G280800 Sobic001G465700 Sobic001G465700 Sobic003G442700--Sobic001G465700 Sobic004G235600 Sobic004G235600 Sobic003G442700--Sobic004G235600 Sobic008G001900 Sobic008G001900 Sobic003G442700--Sobic008G001900 Sobic003G332700 Sobic003G332700 Sobic003G442700--Sobic003G332700 Sobic009G121000 Sobic009G121000 Sobic003G442700--Sobic009G121000 Sobic002G042500 Sobic002G042500 Sobic003G442700--Sobic002G042500 Sobic001G060401 Sobic001G060401 Sobic003G442700--Sobic001G060401 Sobic004G001300 Sobic004G001300 Sobic003G442700--Sobic004G001300 Sobic003G442700--Sobic001G073900 Sobic010G256700--Sobic007G116200 Sobic010G256700--Sobic003G396200 Sobic010G256700--Sobic006G182900 Sobic010G256700--Sobic001G159400 Sobic010G248700 Sobic010G248700 Sobic010G256700--Sobic010G248700 Sobic010G256700--Sobic007G193700 Sobic006G133900 Sobic006G133900 Sobic010G256700--Sobic006G133900 Sobic001G454500 Sobic001G454500 Sobic010G256700--Sobic001G454500 Sobic002G104100 Sobic002G104100 Sobic010G256700--Sobic002G104100 Sobic002G127550--Sobic003G138500 Sobic010G126000 Sobic010G126000 Sobic002G127550--Sobic010G126000 Sobic008G044100 Sobic008G044100 Sobic002G127550--Sobic008G044100 Sobic002G127550--Sobic004G034800 Sobic001G194200 Sobic001G194200 Sobic002G127550--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic002G127550--Sobic008G001200 Sobic002G127550--Sobic010G010700 Sobic004G291900 Sobic004G291900 Sobic002G127550--Sobic004G291900 Sobic002G127550--Sobic004G209600 Sobic004G354200--Sobic004G034800 Sobic008G011200 Sobic008G011200 Sobic004G354200--Sobic008G011200 Sobic004G354200--Sobic010G176550 Sobic004G354200--Sobic002G127550 Sobic006G030400 Sobic006G030400 Sobic004G354200--Sobic006G030400 Sobic004G354200--Sobic001G433000 Sobic004G120100 Sobic004G120100 Sobic004G354200--Sobic004G120100 Sobic003G381200 Sobic003G381200 Sobic004G354200--Sobic003G381200 Sobic007G185700 Sobic007G185700 Sobic004G354200--Sobic007G185700 Sobic002G029900--Sobic008G044100 Sobic001G374100 Sobic001G374100 Sobic002G029900--Sobic001G374100 Sobic002G029900--Sobic010G243900 Sobic002G029900--Sobic004G209600 Sobic001G456900 Sobic001G456900 Sobic002G029900--Sobic001G456900 Sobic003G168100 Sobic003G168100 Sobic002G029900--Sobic003G168100 Sobic002G029900--Sobic002G127550 Sobic004G244900 Sobic004G244900 Sobic002G029900--Sobic004G244900 Sobic007G161000 Sobic007G161000 Sobic002G029900--Sobic007G161000
Octagon: transcription factors


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