Gene annotation
Transcriptome id Sobic.003G218900.1
Synonym Sb03g027770
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XR03
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF210
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT2G27360 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g42730.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a038493 , Zm00025a028708
Brachypodium -
Barley -
Wheat TraesCS3B02G250200 , TraesCS3B02G250200 , TraesCS2B02G171000 , TraesCS3D02G232800 , TraesCS3D02G232800 , TraesCS3A02G219800 , TraesCS3A02G219800
Populus -


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cDNA sequences
Sobic.003G218900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G097100 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
2 Sobic.004G054100 protein-O-fucosyltransferase 1, putative, expressed -
3 Sobic.003G354600 csAtPR5, putative, expressed -
4 Sobic.002G339600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
5 Sobic.002G091600 methyltransferase, putative, expressed -
6 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
7 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
8 Sobic.002G309900 cupin 2, conserved barrel domain protein, putative, expressed K14977: ylbA, (S)-ureidoglycine aminohydrolase
9 Sobic.006G120500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
10 Sobic.001G355800 methyltransferase, putative, expressed -
11 Sobic.008G048300 transcription elongation factor protein, putative, expressed -
12 Sobic.001G339500 expressed protein -
13 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
14 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
15 Sobic.004G033700 expressed protein -
16 Sobic.010G186000 expressed protein -
17 Sobic.002G335000 UPF0041 domain containing protein, putative, expressed -
18 Sobic.004G295300 expressed protein -
19 Sobic.006G271800 potasium efflux antiporter protein, putative, expressed -
20 Sobic.008G070800 expressed protein -


Gene co-expression network
sample Sobic003G218900 Sobic003G218900 Sobic001G097100 Sobic001G097100 Sobic003G218900--Sobic001G097100 Sobic004G054100 Sobic004G054100 Sobic003G218900--Sobic004G054100 Sobic003G354600 Sobic003G354600 Sobic003G218900--Sobic003G354600 Sobic002G339600 Sobic002G339600 Sobic003G218900--Sobic002G339600 Sobic002G091600 Sobic002G091600 Sobic003G218900--Sobic002G091600 Sobic010G205100 Sobic010G205100 Sobic003G218900--Sobic010G205100 Sobic001G136800 Sobic001G136800 Sobic003G218900--Sobic001G136800 Sobic002G309900 Sobic002G309900 Sobic003G218900--Sobic002G309900 Sobic006G120500 Sobic006G120500 Sobic003G218900--Sobic006G120500 Sobic010G085100 Sobic010G085100 Sobic001G097100--Sobic010G085100 Sobic010G067100 Sobic010G067100 Sobic001G097100--Sobic010G067100 Sobic003G185900 Sobic003G185900 Sobic001G097100--Sobic003G185900 Sobic008G033000 Sobic008G033000 Sobic001G097100--Sobic008G033000 Sobic004G154200 Sobic004G154200 Sobic001G097100--Sobic004G154200 Sobic001G097100--Sobic002G091600 Sobic005G126300 Sobic005G126300 Sobic001G097100--Sobic005G126300 Sobic003G332700 Sobic003G332700 Sobic001G097100--Sobic003G332700 Sobic008G117000 Sobic008G117000 Sobic001G097100--Sobic008G117000 Sobic001G031100 Sobic001G031100 Sobic004G054100--Sobic001G031100 Sobic004G054100--Sobic003G354600 Sobic009G084000 Sobic009G084000 Sobic004G054100--Sobic009G084000 Sobic010G020400 Sobic010G020400 Sobic004G054100--Sobic010G020400 Sobic002G359400 Sobic002G359400 Sobic004G054100--Sobic002G359400 Sobic001G007000 Sobic001G007000 Sobic004G054100--Sobic001G007000 Sobic002G047700 Sobic002G047700 Sobic004G054100--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic004G054100--Sobic006G180000 Sobic001G355800 Sobic001G355800 Sobic004G054100--Sobic001G355800 Sobic003G354600--Sobic001G136800 Sobic003G119600 Sobic003G119600 Sobic003G354600--Sobic003G119600 Sobic002G305000 Sobic002G305000 Sobic003G354600--Sobic002G305000 Sobic003G354600--Sobic004G054100 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic009G201300 Sobic009G201300 Sobic003G354600--Sobic009G201300 Sobic002G181600 Sobic002G181600 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800 Sobic001G339500 Sobic001G339500 Sobic002G339600--Sobic001G339500 Sobic006G215600 Sobic006G215600 Sobic002G339600--Sobic006G215600 Sobic002G111200 Sobic002G111200 Sobic002G339600--Sobic002G111200 Sobic003G443500 Sobic003G443500 Sobic002G339600--Sobic003G443500 Sobic002G128900 Sobic002G128900 Sobic002G339600--Sobic002G128900 Sobic004G151500 Sobic004G151500 Sobic002G339600--Sobic004G151500 Sobic001G257700 Sobic001G257700 Sobic002G339600--Sobic001G257700 Sobic002G339600--Sobic002G309900 Sobic007G033800 Sobic007G033800 Sobic002G339600--Sobic007G033800 Sobic004G193700 Sobic004G193700 Sobic002G091600--Sobic004G193700 Sobic003G110800 Sobic003G110800 Sobic002G091600--Sobic003G110800 Sobic007G136200 Sobic007G136200 Sobic002G091600--Sobic007G136200 Sobic002G091600--Sobic003G119600 Sobic002G091600--Sobic001G097100 Sobic001G530900 Sobic001G530900 Sobic002G091600--Sobic001G530900 Sobic005G084500 Sobic005G084500 Sobic002G091600--Sobic005G084500 Sobic009G215500 Sobic009G215500 Sobic002G091600--Sobic009G215500 Sobic005G106600 Sobic005G106600 Sobic002G091600--Sobic005G106600 Sobic006G064100 Sobic006G064100 Sobic010G205100--Sobic006G064100 Sobic010G205100--Sobic010G085100 Sobic001G531500 Sobic001G531500 Sobic010G205100--Sobic001G531500 Sobic001G073900 Sobic001G073900 Sobic010G205100--Sobic001G073900 Sobic009G038900 Sobic009G038900 Sobic010G205100--Sobic009G038900 Sobic003G036200 Sobic003G036200 Sobic010G205100--Sobic003G036200 Sobic005G101200 Sobic005G101200 Sobic010G205100--Sobic005G101200 Sobic002G404800 Sobic002G404800 Sobic010G205100--Sobic002G404800 Sobic010G205100--Sobic003G332700 Sobic001G136800--Sobic003G354600 Sobic005G199400 Sobic005G199400 Sobic001G136800--Sobic005G199400 Sobic010G125500 Sobic010G125500 Sobic001G136800--Sobic010G125500 Sobic003G264800 Sobic003G264800 Sobic001G136800--Sobic003G264800 Sobic004G244900 Sobic004G244900 Sobic001G136800--Sobic004G244900 Sobic001G136800--Sobic009G201300 Sobic001G136800--Sobic005G106600 Sobic003G311900 Sobic003G311900 Sobic001G136800--Sobic003G311900 Sobic001G136800--Sobic002G091600 Sobic002G309900--Sobic002G091600 Sobic002G131200 Sobic002G131200 Sobic002G309900--Sobic002G131200 Sobic008G070800 Sobic008G070800 Sobic002G309900--Sobic008G070800 Sobic001G085600 Sobic001G085600 Sobic002G309900--Sobic001G085600 Sobic001G303100 Sobic001G303100 Sobic002G309900--Sobic001G303100 Sobic006G092000 Sobic006G092000 Sobic002G309900--Sobic006G092000 Sobic005G100600 Sobic005G100600 Sobic002G309900--Sobic005G100600 Sobic002G309900--Sobic002G111200 Sobic002G309900--Sobic001G257700 Sobic004G317500 Sobic004G317500 Sobic006G120500--Sobic004G317500 Sobic008G033200 Sobic008G033200 Sobic006G120500--Sobic008G033200 Sobic002G324500 Sobic002G324500 Sobic006G120500--Sobic002G324500 Sobic005G001700 Sobic005G001700 Sobic006G120500--Sobic005G001700 Sobic004G027600 Sobic004G027600 Sobic006G120500--Sobic004G027600 Sobic002G403600 Sobic002G403600 Sobic006G120500--Sobic002G403600 Sobic006G120500--Sobic003G036200 Sobic006G120500--Sobic006G064100 Sobic006G120500--Sobic010G085100
Octagon: transcription factors


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