Gene annotation
Transcriptome id Sobic.002G181300.3,Sobic.002G181300.2,Sobic.002G181300.1
Synonym Sb02g022970
Functional annotation expressed protein
UniProt A0A1B6QC40
Pfam -
Panther DB PTHR33868 PTHR33868:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46550 : -
RAP-DB (Rice) LOC_Os09g19890.1,LOC_Os09g19890.2 : expressed protein
MaizeGDB (Corn) Zm00025a013812 , Zm00025a046676
Brachypodium PNT68046 , KQJ98179 , KQJ89976 , KQJ98182 , KQJ98183 , KQJ98184 , PNT68044 , PNT68045 , KQJ98180 , KQJ98181
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G065100 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
2 Sobic.004G317100 DENN domain containing protein, expressed -
3 Sobic.004G131040 - K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
4 Sobic.004G181700 calmodulin binding protein, putative, expressed -
5 Sobic.002G425700 ribonucleases P/MRP protein subunit POP1 containing protein, expressed K01164: ribonuclease P/MRP protein subunit POP1
6 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
7 Sobic.010G000600 BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed -
8 Sobic.001G498600 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
9 Sobic.005G044400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@response regulator receiver domain containing protein, expressed K12130: pseudo-response regulator 5
10 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
11 Sobic.006G030600 xa21, putative, expressed -
12 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
13 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
14 Sobic.002G193100 expressed protein -
15 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
16 Sobic.001G261501 - -
17 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
18 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14
19 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.006G086500 STE_MEKK_ste11_MAP3K.16 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -


Gene co-expression network
sample Sobic002G181300 Sobic002G181300 Sobic007G065100 Sobic007G065100 Sobic002G181300--Sobic007G065100 Sobic004G317100 Sobic004G317100 Sobic002G181300--Sobic004G317100 Sobic004G131040 Sobic004G131040 Sobic002G181300--Sobic004G131040 Sobic004G181700 Sobic004G181700 Sobic002G181300--Sobic004G181700 Sobic002G425700 Sobic002G425700 Sobic002G181300--Sobic002G425700 Sobic002G276100 Sobic002G276100 Sobic002G181300--Sobic002G276100 Sobic010G000600 Sobic010G000600 Sobic002G181300--Sobic010G000600 Sobic001G498600 Sobic001G498600 Sobic002G181300--Sobic001G498600 Sobic005G044400 Sobic005G044400 Sobic002G181300--Sobic005G044400 Sobic007G065100--Sobic002G425700 Sobic007G065100--Sobic002G181300 Sobic003G381200 Sobic003G381200 Sobic007G065100--Sobic003G381200 Sobic008G172300 Sobic008G172300 Sobic007G065100--Sobic008G172300 Sobic001G090500 Sobic001G090500 Sobic007G065100--Sobic001G090500 Sobic007G065100--Sobic001G498600 Sobic001G072500 Sobic001G072500 Sobic007G065100--Sobic001G072500 Sobic006G153900 Sobic006G153900 Sobic007G065100--Sobic006G153900 Sobic006G119400 Sobic006G119400 Sobic007G065100--Sobic006G119400 Sobic004G317100--Sobic004G181700 Sobic004G317100--Sobic001G498600 Sobic003G359600 Sobic003G359600 Sobic004G317100--Sobic003G359600 Sobic007G193700 Sobic007G193700 Sobic004G317100--Sobic007G193700 Sobic001G159400 Sobic001G159400 Sobic004G317100--Sobic001G159400 Sobic010G256700 Sobic010G256700 Sobic004G317100--Sobic010G256700 Sobic001G365900 Sobic001G365900 Sobic004G317100--Sobic001G365900 Sobic010G112000 Sobic010G112000 Sobic004G317100--Sobic010G112000 Sobic002G173000 Sobic002G173000 Sobic004G317100--Sobic002G173000 Sobic004G131040--Sobic010G000600 Sobic004G265800 Sobic004G265800 Sobic004G131040--Sobic004G265800 Sobic004G131040--Sobic002G181300 Sobic001G146800 Sobic001G146800 Sobic004G131040--Sobic001G146800 Sobic002G315800 Sobic002G315800 Sobic004G131040--Sobic002G315800 Sobic006G030600 Sobic006G030600 Sobic004G131040--Sobic006G030600 Sobic007G004500 Sobic007G004500 Sobic004G131040--Sobic007G004500 Sobic002G193100 Sobic002G193100 Sobic004G131040--Sobic002G193100 Sobic003G110000 Sobic003G110000 Sobic004G131040--Sobic003G110000 Sobic004G181700--Sobic004G317100 Sobic004G181700--Sobic002G276100 Sobic004G181700--Sobic001G159400 Sobic004G181600 Sobic004G181600 Sobic004G181700--Sobic004G181600 Sobic008G146900 Sobic008G146900 Sobic004G181700--Sobic008G146900 Sobic001G191600 Sobic001G191600 Sobic004G181700--Sobic001G191600 Sobic009G097200 Sobic009G097200 Sobic004G181700--Sobic009G097200 Sobic006G086500 Sobic006G086500 Sobic004G181700--Sobic006G086500 Sobic004G181700--Sobic008G172300 Sobic002G425700--Sobic007G065100 Sobic002G425700--Sobic006G153900 Sobic002G425700--Sobic002G276100 Sobic007G165600 Sobic007G165600 Sobic002G425700--Sobic007G165600 Sobic010G143800 Sobic010G143800 Sobic002G425700--Sobic010G143800 Sobic001G261501 Sobic001G261501 Sobic002G425700--Sobic001G261501 Sobic002G425700--Sobic001G498600 Sobic005G122700 Sobic005G122700 Sobic002G425700--Sobic005G122700 Sobic002G425700--Sobic001G090500 Sobic002G276100--Sobic003G381200 Sobic004G026500 Sobic004G026500 Sobic002G276100--Sobic004G026500 Sobic002G276100--Sobic004G181700 Sobic002G276100--Sobic001G159400 Sobic010G138000 Sobic010G138000 Sobic002G276100--Sobic010G138000 Sobic002G168500 Sobic002G168500 Sobic002G276100--Sobic002G168500 Sobic009G193500 Sobic009G193500 Sobic002G276100--Sobic009G193500 Sobic002G276100--Sobic008G172300 Sobic001G268200 Sobic001G268200 Sobic002G276100--Sobic001G268200 Sobic010G000600--Sobic004G131040 Sobic007G110200 Sobic007G110200 Sobic010G000600--Sobic007G110200 Sobic010G000600--Sobic006G153900 Sobic001G300100 Sobic001G300100 Sobic010G000600--Sobic001G300100 Sobic010G000600--Sobic009G193500 Sobic004G210900 Sobic004G210900 Sobic010G000600--Sobic004G210900 Sobic010G000600--Sobic003G381200 Sobic010G000600--Sobic002G276100 Sobic010G000600--Sobic002G181300 Sobic001G498600--Sobic010G112000 Sobic006G131500 Sobic006G131500 Sobic001G498600--Sobic006G131500 Sobic001G498600--Sobic001G146800 Sobic005G008800 Sobic005G008800 Sobic001G498600--Sobic005G008800 Sobic002G134200 Sobic002G134200 Sobic001G498600--Sobic002G134200 Sobic001G058700 Sobic001G058700 Sobic001G498600--Sobic001G058700 Sobic001G498600--Sobic004G317100 Sobic001G498600--Sobic007G193700 Sobic007G172400 Sobic007G172400 Sobic001G498600--Sobic007G172400 Sobic003G103200 Sobic003G103200 Sobic005G044400--Sobic003G103200 Sobic005G044400--Sobic002G181300 Sobic003G054200 Sobic003G054200 Sobic005G044400--Sobic003G054200 Sobic005G044400--Sobic007G110200 Sobic005G044400--Sobic004G181700 Sobic010G207500 Sobic010G207500 Sobic005G044400--Sobic010G207500 Sobic005G044400--Sobic004G317100 Sobic002G125900 Sobic002G125900 Sobic005G044400--Sobic002G125900 Sobic002G137300 Sobic002G137300 Sobic005G044400--Sobic002G137300
Octagon: transcription factors


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