Gene annotation
Transcriptome id Sobic.001G175600.1
Synonym Sb01g015260, mtACP3
Functional annotation acyl carrier protein, putative, expressed
UniProt C5WTA8
Pfam PF00550
Panther DB PTHR20863 PTHR20863:SF32
NCBI CDD KOG1748; Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit
KEGG Orthology K03955; NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47630 : mitochondrial acyl carrier protein 3
RAP-DB (Rice) LOC_Os03g39860.1 : acyl carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a007177
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G175600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G071000 SLT1 protein, putative, expressed -
2 Sobic.001G526600 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
3 Sobic.008G088200 DnaK family protein, putative, expressed -
4 Sobic.003G054200 thioredoxin, putative, expressed K03671: thioredoxin 1
5 Sobic.001G008700 DUF565 domain containing protein, putative, expressed -
6 Sobic.010G253100 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
7 Sobic.010G037400 RNA recognition motif containing protein, putative, expressed -
8 Sobic.003G159500 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.009G049300 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.002G242200 expressed protein -
11 Sobic.001G539500 SKP1, putative, expressed -
12 Sobic.004G023900 3-isopropylmalate dehydratase large subunit 2, putative, expressed K01703: leuC, 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
13 Sobic.010G029900 leucine carboxyl methyltransferase 1, putative, expressed K15451: PPM2, LCMT2, tRNA wybutosine-synthesizing protein 4
14 Sobic.007G041300 expressed protein -
15 Sobic.009G070100 expressed protein -
16 Sobic.003G051700 universal stress protein domain containing protein, putative, expressed -
17 Sobic.003G190500 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
18 Sobic.008G145800 nucleobase-ascorbate transporter, putative, expressed -
19 Sobic.006G245100 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
20 Sobic.007G128500 expressed protein -


Gene co-expression network
sample Sobic001G175600 Sobic001G175600 Sobic003G071000 Sobic003G071000 Sobic001G175600--Sobic003G071000 Sobic001G526600 Sobic001G526600 Sobic001G175600--Sobic001G526600 Sobic008G088200 Sobic008G088200 Sobic001G175600--Sobic008G088200 Sobic003G054200 Sobic003G054200 Sobic001G175600--Sobic003G054200 Sobic001G008700 Sobic001G008700 Sobic001G175600--Sobic001G008700 Sobic010G253100 Sobic010G253100 Sobic001G175600--Sobic010G253100 Sobic010G037400 Sobic010G037400 Sobic001G175600--Sobic010G037400 Sobic003G159500 Sobic003G159500 Sobic001G175600--Sobic003G159500 Sobic009G049300 Sobic009G049300 Sobic001G175600--Sobic009G049300 Sobic010G082700 Sobic010G082700 Sobic003G071000--Sobic010G082700 Sobic003G071000--Sobic003G054200 Sobic002G110700 Sobic002G110700 Sobic003G071000--Sobic002G110700 Sobic003G071000--Sobic001G175600 Sobic010G000300 Sobic010G000300 Sobic003G071000--Sobic010G000300 Sobic003G071000--Sobic009G049300 Sobic004G001400 Sobic004G001400 Sobic003G071000--Sobic004G001400 Sobic002G105200 Sobic002G105200 Sobic003G071000--Sobic002G105200 Sobic001G395400 Sobic001G395400 Sobic003G071000--Sobic001G395400 Sobic001G526600--Sobic003G071000 Sobic001G526600--Sobic001G175600 Sobic010G184100 Sobic010G184100 Sobic001G526600--Sobic010G184100 Sobic002G204000 Sobic002G204000 Sobic001G526600--Sobic002G204000 Sobic001G266400 Sobic001G266400 Sobic001G526600--Sobic001G266400 Sobic009G015700 Sobic009G015700 Sobic001G526600--Sobic009G015700 Sobic001G526600--Sobic004G001400 Sobic009G174900 Sobic009G174900 Sobic001G526600--Sobic009G174900 Sobic005G033200 Sobic005G033200 Sobic001G526600--Sobic005G033200 Sobic001G208700 Sobic001G208700 Sobic008G088200--Sobic001G208700 Sobic008G145800 Sobic008G145800 Sobic008G088200--Sobic008G145800 Sobic003G038100 Sobic003G038100 Sobic008G088200--Sobic003G038100 Sobic004G311400 Sobic004G311400 Sobic008G088200--Sobic004G311400 Sobic008G096000 Sobic008G096000 Sobic008G088200--Sobic008G096000 Sobic006G200500 Sobic006G200500 Sobic008G088200--Sobic006G200500 Sobic008G088200--Sobic003G159500 Sobic002G029100 Sobic002G029100 Sobic008G088200--Sobic002G029100 Sobic004G285400 Sobic004G285400 Sobic008G088200--Sobic004G285400 Sobic003G054200--Sobic003G071000 Sobic002G309800 Sobic002G309800 Sobic003G054200--Sobic002G309800 Sobic002G242200 Sobic002G242200 Sobic003G054200--Sobic002G242200 Sobic001G108900 Sobic001G108900 Sobic003G054200--Sobic001G108900 Sobic006G252300 Sobic006G252300 Sobic003G054200--Sobic006G252300 Sobic002G125900 Sobic002G125900 Sobic003G054200--Sobic002G125900 Sobic005G160400 Sobic005G160400 Sobic003G054200--Sobic005G160400 Sobic005G044400 Sobic005G044400 Sobic003G054200--Sobic005G044400 Sobic003G054200--Sobic010G082700 Sobic001G463500 Sobic001G463500 Sobic001G008700--Sobic001G463500 Sobic010G221600 Sobic010G221600 Sobic001G008700--Sobic010G221600 Sobic001G011300 Sobic001G011300 Sobic001G008700--Sobic001G011300 Sobic001G008700--Sobic001G175600 Sobic007G102700 Sobic007G102700 Sobic001G008700--Sobic007G102700 Sobic004G023900 Sobic004G023900 Sobic001G008700--Sobic004G023900 Sobic005G046900 Sobic005G046900 Sobic001G008700--Sobic005G046900 Sobic010G108900 Sobic010G108900 Sobic001G008700--Sobic010G108900 Sobic006G168400 Sobic006G168400 Sobic001G008700--Sobic006G168400 Sobic002G359900 Sobic002G359900 Sobic010G253100--Sobic002G359900 Sobic001G038100 Sobic001G038100 Sobic010G253100--Sobic001G038100 Sobic006G120800 Sobic006G120800 Sobic010G253100--Sobic006G120800 Sobic006G261100 Sobic006G261100 Sobic010G253100--Sobic006G261100 Sobic001G458200 Sobic001G458200 Sobic010G253100--Sobic001G458200 Sobic010G253100--Sobic002G204000 Sobic002G276900 Sobic002G276900 Sobic010G253100--Sobic002G276900 Sobic002G403200 Sobic002G403200 Sobic010G253100--Sobic002G403200 Sobic003G192000 Sobic003G192000 Sobic010G253100--Sobic003G192000 Sobic007G091600 Sobic007G091600 Sobic010G037400--Sobic007G091600 Sobic010G037400--Sobic010G000300 Sobic010G266500 Sobic010G266500 Sobic010G037400--Sobic010G266500 Sobic001G249700 Sobic001G249700 Sobic010G037400--Sobic001G249700 Sobic001G114500 Sobic001G114500 Sobic010G037400--Sobic001G114500 Sobic003G220700 Sobic003G220700 Sobic010G037400--Sobic003G220700 Sobic004G186000 Sobic004G186000 Sobic010G037400--Sobic004G186000 Sobic009G164000 Sobic009G164000 Sobic010G037400--Sobic009G164000 Sobic010G037400--Sobic002G242200 Sobic006G179600 Sobic006G179600 Sobic003G159500--Sobic006G179600 Sobic006G061100 Sobic006G061100 Sobic003G159500--Sobic006G061100 Sobic010G207400 Sobic010G207400 Sobic003G159500--Sobic010G207400 Sobic009G132600 Sobic009G132600 Sobic003G159500--Sobic009G132600 Sobic010G071600 Sobic010G071600 Sobic003G159500--Sobic010G071600 Sobic010G273800 Sobic010G273800 Sobic003G159500--Sobic010G273800 Sobic007G042300 Sobic007G042300 Sobic003G159500--Sobic007G042300 Sobic003G159500--Sobic002G403200 Sobic008G160500 Sobic008G160500 Sobic003G159500--Sobic008G160500 Sobic009G049300--Sobic005G160400 Sobic007G078600 Sobic007G078600 Sobic009G049300--Sobic007G078600 Sobic006G096900 Sobic006G096900 Sobic009G049300--Sobic006G096900 Sobic009G049300--Sobic010G082700 Sobic001G080700 Sobic001G080700 Sobic009G049300--Sobic001G080700 Sobic010G021500 Sobic010G021500 Sobic009G049300--Sobic010G021500 Sobic007G136800 Sobic007G136800 Sobic009G049300--Sobic007G136800 Sobic002G121600 Sobic002G121600 Sobic009G049300--Sobic002G121600 Sobic007G159500 Sobic007G159500 Sobic009G049300--Sobic007G159500
Octagon: transcription factors


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