Gene annotation
Transcriptome id Sobic.001G008700.1,Sobic.001G008700.2
Synonym Sb01g000870
Functional annotation DUF565 domain containing protein, putative, expressed
UniProt C5WS13
Pfam PF04483
Panther DB PTHR33787 PTHR33787:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56830 : Protein of unknown function (DUF565)
RAP-DB (Rice) LOC_Os03g63554.1 : DUF565 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a016315
Brachypodium KQK12059
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G008700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G463500 FAD-linked sulfhydryl oxidase ALR, putative, expressed K17783: ERV1, GFER, mitochondrial FAD-linked sulfhydryl oxidase
2 Sobic.010G221600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
3 Sobic.001G011300 expressed protein -
4 Sobic.001G175600 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
5 Sobic.007G102700 - -
6 Sobic.004G023900 3-isopropylmalate dehydratase large subunit 2, putative, expressed K01703: leuC, 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
7 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
8 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
9 Sobic.006G168400 ethylene-responsive element-binding protein, putative, expressed -
10 Sobic.001G218800 expressed protein -
11 Sobic.003G190500 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
12 Sobic.007G041300 expressed protein -
13 Sobic.008G088200 DnaK family protein, putative, expressed -
14 Sobic.010G152100 expressed protein -
15 Sobic.006G087100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14943: muscleblind
16 Sobic.006G258300 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
17 Sobic.001G208700 ATTIC110/TIC110, putative, expressed -
18 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
19 Sobic.001G153300 cytosolic 5-nucleotidase III, putative, expressed K01081: 5'-nucleotidase
20 Sobic.005G187400 A49-like RNA polymerase I associated factor family protein, expressed K03005: RPA49, DNA-directed RNA polymerase I subunit RPA49


Gene co-expression network
sample Sobic001G008700 Sobic001G008700 Sobic001G463500 Sobic001G463500 Sobic001G008700--Sobic001G463500 Sobic010G221600 Sobic010G221600 Sobic001G008700--Sobic010G221600 Sobic001G011300 Sobic001G011300 Sobic001G008700--Sobic001G011300 Sobic001G175600 Sobic001G175600 Sobic001G008700--Sobic001G175600 Sobic007G102700 Sobic007G102700 Sobic001G008700--Sobic007G102700 Sobic004G023900 Sobic004G023900 Sobic001G008700--Sobic004G023900 Sobic005G046900 Sobic005G046900 Sobic001G008700--Sobic005G046900 Sobic010G108900 Sobic010G108900 Sobic001G008700--Sobic010G108900 Sobic006G168400 Sobic006G168400 Sobic001G008700--Sobic006G168400 Sobic004G296800 Sobic004G296800 Sobic001G463500--Sobic004G296800 Sobic008G135701 Sobic008G135701 Sobic001G463500--Sobic008G135701 Sobic002G330500 Sobic002G330500 Sobic001G463500--Sobic002G330500 Sobic001G463500--Sobic001G008700 Sobic003G420900 Sobic003G420900 Sobic001G463500--Sobic003G420900 Sobic001G543700 Sobic001G543700 Sobic001G463500--Sobic001G543700 Sobic001G463500--Sobic001G011300 Sobic002G253100 Sobic002G253100 Sobic001G463500--Sobic002G253100 Sobic002G333100 Sobic002G333100 Sobic001G463500--Sobic002G333100 Sobic003G265500 Sobic003G265500 Sobic010G221600--Sobic003G265500 Sobic010G221600--Sobic001G543700 Sobic008G090900 Sobic008G090900 Sobic010G221600--Sobic008G090900 Sobic004G214400 Sobic004G214400 Sobic010G221600--Sobic004G214400 Sobic004G003900 Sobic004G003900 Sobic010G221600--Sobic004G003900 Sobic001G478600 Sobic001G478600 Sobic010G221600--Sobic001G478600 Sobic002G189600 Sobic002G189600 Sobic010G221600--Sobic002G189600 Sobic004G208600 Sobic004G208600 Sobic010G221600--Sobic004G208600 Sobic003G292300 Sobic003G292300 Sobic010G221600--Sobic003G292300 Sobic001G306700 Sobic001G306700 Sobic001G011300--Sobic001G306700 Sobic001G011300--Sobic003G265500 Sobic004G070800 Sobic004G070800 Sobic001G011300--Sobic004G070800 Sobic010G091200 Sobic010G091200 Sobic001G011300--Sobic010G091200 Sobic001G011300--Sobic001G463500 Sobic001G011300--Sobic003G420900 Sobic001G011300--Sobic001G008700 Sobic004G068300 Sobic004G068300 Sobic001G011300--Sobic004G068300 Sobic004G015700 Sobic004G015700 Sobic001G011300--Sobic004G015700 Sobic003G071000 Sobic003G071000 Sobic001G175600--Sobic003G071000 Sobic001G526600 Sobic001G526600 Sobic001G175600--Sobic001G526600 Sobic008G088200 Sobic008G088200 Sobic001G175600--Sobic008G088200 Sobic003G054200 Sobic003G054200 Sobic001G175600--Sobic003G054200 Sobic001G175600--Sobic001G008700 Sobic010G253100 Sobic010G253100 Sobic001G175600--Sobic010G253100 Sobic010G037400 Sobic010G037400 Sobic001G175600--Sobic010G037400 Sobic003G159500 Sobic003G159500 Sobic001G175600--Sobic003G159500 Sobic009G049300 Sobic009G049300 Sobic001G175600--Sobic009G049300 Sobic007G041300 Sobic007G041300 Sobic007G102700--Sobic007G041300 Sobic004G156800 Sobic004G156800 Sobic007G102700--Sobic004G156800 Sobic010G237900 Sobic010G237900 Sobic007G102700--Sobic010G237900 Sobic004G129300 Sobic004G129300 Sobic007G102700--Sobic004G129300 Sobic007G191700 Sobic007G191700 Sobic007G102700--Sobic007G191700 Sobic001G244300 Sobic001G244300 Sobic007G102700--Sobic001G244300 Sobic001G473600 Sobic001G473600 Sobic007G102700--Sobic001G473600 Sobic010G186600 Sobic010G186600 Sobic007G102700--Sobic010G186600 Sobic001G114500 Sobic001G114500 Sobic007G102700--Sobic001G114500 Sobic003G190500 Sobic003G190500 Sobic004G023900--Sobic003G190500 Sobic001G039500 Sobic001G039500 Sobic004G023900--Sobic001G039500 Sobic009G127300 Sobic009G127300 Sobic004G023900--Sobic009G127300 Sobic006G245100 Sobic006G245100 Sobic004G023900--Sobic006G245100 Sobic004G018000 Sobic004G018000 Sobic004G023900--Sobic004G018000 Sobic004G023900--Sobic003G159500 Sobic002G390300 Sobic002G390300 Sobic004G023900--Sobic002G390300 Sobic004G023900--Sobic001G008700 Sobic002G119400 Sobic002G119400 Sobic004G023900--Sobic002G119400 Sobic006G276000 Sobic006G276000 Sobic005G046900--Sobic006G276000 Sobic005G046900--Sobic007G041300 Sobic005G079800 Sobic005G079800 Sobic005G046900--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic005G046900--Sobic003G427100 Sobic001G013300 Sobic001G013300 Sobic005G046900--Sobic001G013300 Sobic006G120800 Sobic006G120800 Sobic005G046900--Sobic006G120800 Sobic008G057000 Sobic008G057000 Sobic005G046900--Sobic008G057000 Sobic005G191700 Sobic005G191700 Sobic005G046900--Sobic005G191700 Sobic003G409200 Sobic003G409200 Sobic005G046900--Sobic003G409200 Sobic001G380500 Sobic001G380500 Sobic010G108900--Sobic001G380500 Sobic001G218800 Sobic001G218800 Sobic010G108900--Sobic001G218800 Sobic010G108900--Sobic006G168400 Sobic003G004700 Sobic003G004700 Sobic010G108900--Sobic003G004700 Sobic006G183000 Sobic006G183000 Sobic010G108900--Sobic006G183000 Sobic001G469200 Sobic001G469200 Sobic010G108900--Sobic001G469200 Sobic002G262000 Sobic002G262000 Sobic010G108900--Sobic002G262000 Sobic009G108500 Sobic009G108500 Sobic010G108900--Sobic009G108500 Sobic006G109700 Sobic006G109700 Sobic010G108900--Sobic006G109700 Sobic006G168400--Sobic010G108900 Sobic006G168400--Sobic001G380500 Sobic006G168400--Sobic002G262000 Sobic006G168400--Sobic002G333100 Sobic006G168400--Sobic003G004700 Sobic006G168400--Sobic006G183000 Sobic006G168400--Sobic001G463500 Sobic006G168400--Sobic006G109700 Sobic006G168400--Sobic001G218800
Octagon: transcription factors


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