Gene annotation
Transcriptome id Sobic.010G152100.2,Sobic.010G152100.3,Sobic.010G152100.1,Sobic.010G152100.4
Synonym Sb10g020430
Functional annotation expressed protein
UniProt C5Z3L1
Pfam -
Panther DB PTHR37186 PTHR37186:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28540 : -
RAP-DB (Rice) LOC_Os06g33340.1,LOC_Os06g33340.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK18071
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G119900 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta
2 Sobic.007G143500 splicing factor 3B subunit 5, putative, expressed K12832: SF3B5, splicing factor 3B subunit 5
3 Sobic.002G055100 expressed protein -
4 Sobic.009G001100 expressed protein -
5 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
6 Sobic.006G083100 formyl transferase, putative, expressed K00601: phosphoribosylglycinamide formyltransferase
7 Sobic.009G093200 superoxide dismutase, mitochondrial precursor, putative, expressed K04564: superoxide dismutase, Fe-Mn family
8 Sobic.006G203100 expressed protein -
9 Sobic.001G168900 bacterial transferase hexapeptide domain containing protein, expressed K03241: translation initiation factor eIF-2B subunit gamma
10 Sobic.009G031200 expressed protein -
11 Sobic.005G025800 dual specificity protein phosphatase, putative, expressed K14819: DUSP12, dual specificity phosphatase 12
12 Sobic.002G253100 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
13 Sobic.003G200600 CBS domain containing membrane protein, putative, expressed -
14 Sobic.010G055800 CDK-activating kinase assembly factor MAT1 family protein, expressed K10842: CDK-activating kinase assembly factor MAT1
15 Sobic.009G137700 hydrolase, NUDIX family, domain containing protein, expressed K01823: idi, isopentenyl-diphosphate Delta-isomerase
16 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
17 Sobic.004G068500 CUE domain containing protein, expressed -
18 Sobic.007G161200 expressed protein -
19 Sobic.006G183000 RING zinc finger protein, putative, expressed -
20 Sobic.001G463500 FAD-linked sulfhydryl oxidase ALR, putative, expressed K17783: ERV1, GFER, mitochondrial FAD-linked sulfhydryl oxidase


Gene co-expression network
sample Sobic010G152100 Sobic010G152100 Sobic007G119900 Sobic007G119900 Sobic010G152100--Sobic007G119900 Sobic007G143500 Sobic007G143500 Sobic010G152100--Sobic007G143500 Sobic002G055100 Sobic002G055100 Sobic010G152100--Sobic002G055100 Sobic009G001100 Sobic009G001100 Sobic010G152100--Sobic009G001100 Sobic001G537500 Sobic001G537500 Sobic010G152100--Sobic001G537500 Sobic006G083100 Sobic006G083100 Sobic010G152100--Sobic006G083100 Sobic009G093200 Sobic009G093200 Sobic010G152100--Sobic009G093200 Sobic006G203100 Sobic006G203100 Sobic010G152100--Sobic006G203100 Sobic001G168900 Sobic001G168900 Sobic010G152100--Sobic001G168900 Sobic005G025800 Sobic005G025800 Sobic007G119900--Sobic005G025800 Sobic003G083900 Sobic003G083900 Sobic007G119900--Sobic003G083900 Sobic004G133700 Sobic004G133700 Sobic007G119900--Sobic004G133700 Sobic001G152000 Sobic001G152000 Sobic007G119900--Sobic001G152000 Sobic001G226000 Sobic001G226000 Sobic007G119900--Sobic001G226000 Sobic002G253100 Sobic002G253100 Sobic007G119900--Sobic002G253100 Sobic007G119900--Sobic009G001100 Sobic001G291800 Sobic001G291800 Sobic007G119900--Sobic001G291800 Sobic007G119900--Sobic001G168900 Sobic001G334100 Sobic001G334100 Sobic007G143500--Sobic001G334100 Sobic004G307500 Sobic004G307500 Sobic007G143500--Sobic004G307500 Sobic007G143500--Sobic001G168900 Sobic001G007800 Sobic001G007800 Sobic007G143500--Sobic001G007800 Sobic001G416700 Sobic001G416700 Sobic007G143500--Sobic001G416700 Sobic005G178700 Sobic005G178700 Sobic007G143500--Sobic005G178700 Sobic008G098600 Sobic008G098600 Sobic007G143500--Sobic008G098600 Sobic002G005000 Sobic002G005000 Sobic007G143500--Sobic002G005000 Sobic004G235500 Sobic004G235500 Sobic007G143500--Sobic004G235500 Sobic002G067600 Sobic002G067600 Sobic002G055100--Sobic002G067600 Sobic006G034800 Sobic006G034800 Sobic002G055100--Sobic006G034800 Sobic003G400100 Sobic003G400100 Sobic002G055100--Sobic003G400100 Sobic001G105100 Sobic001G105100 Sobic002G055100--Sobic001G105100 Sobic006G257001 Sobic006G257001 Sobic002G055100--Sobic006G257001 Sobic001G067900 Sobic001G067900 Sobic002G055100--Sobic001G067900 Sobic009G033900 Sobic009G033900 Sobic002G055100--Sobic009G033900 Sobic003G219500 Sobic003G219500 Sobic002G055100--Sobic003G219500 Sobic006G183000 Sobic006G183000 Sobic002G055100--Sobic006G183000 Sobic009G001100--Sobic005G025800 Sobic007G191700 Sobic007G191700 Sobic009G001100--Sobic007G191700 Sobic003G121300 Sobic003G121300 Sobic009G001100--Sobic003G121300 Sobic001G472100 Sobic001G472100 Sobic009G001100--Sobic001G472100 Sobic010G232900 Sobic010G232900 Sobic009G001100--Sobic010G232900 Sobic001G042200 Sobic001G042200 Sobic009G001100--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic009G001100--Sobic006G049100 Sobic006G248500 Sobic006G248500 Sobic009G001100--Sobic006G248500 Sobic010G237900 Sobic010G237900 Sobic009G001100--Sobic010G237900 Sobic006G073200 Sobic006G073200 Sobic001G537500--Sobic006G073200 Sobic004G167200 Sobic004G167200 Sobic001G537500--Sobic004G167200 Sobic006G002800 Sobic006G002800 Sobic001G537500--Sobic006G002800 Sobic004G275600 Sobic004G275600 Sobic001G537500--Sobic004G275600 Sobic004G257100 Sobic004G257100 Sobic001G537500--Sobic004G257100 Sobic007G145400 Sobic007G145400 Sobic001G537500--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G537500--Sobic005G115500 Sobic001G178300 Sobic001G178300 Sobic001G537500--Sobic001G178300 Sobic002G246700 Sobic002G246700 Sobic001G537500--Sobic002G246700 Sobic001G332300 Sobic001G332300 Sobic006G083100--Sobic001G332300 Sobic007G112600 Sobic007G112600 Sobic006G083100--Sobic007G112600 Sobic001G211900 Sobic001G211900 Sobic006G083100--Sobic001G211900 Sobic001G112400 Sobic001G112400 Sobic006G083100--Sobic001G112400 Sobic004G025300 Sobic004G025300 Sobic006G083100--Sobic004G025300 Sobic001G358500 Sobic001G358500 Sobic006G083100--Sobic001G358500 Sobic001G378200 Sobic001G378200 Sobic006G083100--Sobic001G378200 Sobic001G099900 Sobic001G099900 Sobic006G083100--Sobic001G099900 Sobic006G142400 Sobic006G142400 Sobic006G083100--Sobic006G142400 Sobic003G428200 Sobic003G428200 Sobic009G093200--Sobic003G428200 Sobic003G244200 Sobic003G244200 Sobic009G093200--Sobic003G244200 Sobic009G093200--Sobic006G203100 Sobic010G044200 Sobic010G044200 Sobic009G093200--Sobic010G044200 Sobic010G073100 Sobic010G073100 Sobic009G093200--Sobic010G073100 Sobic002G423800 Sobic002G423800 Sobic009G093200--Sobic002G423800 Sobic001G338400 Sobic001G338400 Sobic009G093200--Sobic001G338400 Sobic006G211800 Sobic006G211800 Sobic009G093200--Sobic006G211800 Sobic001G478000 Sobic001G478000 Sobic009G093200--Sobic001G478000 Sobic002G256200 Sobic002G256200 Sobic006G203100--Sobic002G256200 Sobic006G203100--Sobic010G073100 Sobic002G341800 Sobic002G341800 Sobic006G203100--Sobic002G341800 Sobic008G145100 Sobic008G145100 Sobic006G203100--Sobic008G145100 Sobic006G203100--Sobic001G338400 Sobic001G145500 Sobic001G145500 Sobic006G203100--Sobic001G145500 Sobic002G029300 Sobic002G029300 Sobic006G203100--Sobic002G029300 Sobic001G249700 Sobic001G249700 Sobic006G203100--Sobic001G249700 Sobic006G203100--Sobic006G183000 Sobic007G187600 Sobic007G187600 Sobic001G168900--Sobic007G187600 Sobic001G168900--Sobic004G307500 Sobic002G077900 Sobic002G077900 Sobic001G168900--Sobic002G077900 Sobic001G168900--Sobic001G291800 Sobic009G258400 Sobic009G258400 Sobic001G168900--Sobic009G258400 Sobic001G168900--Sobic001G042200 Sobic001G168900--Sobic006G049100 Sobic004G346100 Sobic004G346100 Sobic001G168900--Sobic004G346100 Sobic003G132000 Sobic003G132000 Sobic001G168900--Sobic003G132000
Octagon: transcription factors


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