Gene annotation
Transcriptome id Sobic.005G025800.1
Synonym Sb05g002140
Functional annotation dual specificity protein phosphatase, putative, expressed
UniProt C5Y430
Pfam PF00782
Panther DB PTHR10159 PTHR10159:SF293
NCBI CDD -
KEGG Orthology K14819; DUSP12, dual specificity phosphatase 12
Gene Ontology GO:0008138; protein tyrosine/serine/threonine phosphatase activity GO:0006470protein dephosphorylation


Orthologs (automatic annotation)
TAIR AT4G18593 : dual specificity protein phosphatase-related
RAP-DB (Rice) LOC_Os11g04180.1 : dual specificity protein phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a013104
Brachypodium -
Barley -
Wheat TraesCS5D02G153900 , TraesCS5D02G153900 , TraesCS5D02G153900
Populus -


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cDNA sequences
Sobic.005G025800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027700 expressed protein -
2 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
3 Sobic.009G001100 expressed protein -
4 Sobic.003G253400 expressed protein -
5 Sobic.007G119900 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta
6 Sobic.004G133700 apoptosis inhibitor 5, putative, expressed -
7 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
8 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
9 Sobic.006G267300 expressed protein -
10 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
11 Sobic.006G248500 expressed protein -
12 Sobic.003G412300 expressed protein -
13 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
14 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
15 Sobic.006G278700 expressed protein -
16 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
17 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
18 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
19 Sobic.007G056700 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
20 Sobic.009G044900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''


Gene co-expression network
sample Sobic005G025800 Sobic005G025800 Sobic007G027700 Sobic007G027700 Sobic005G025800--Sobic007G027700 Sobic001G226000 Sobic001G226000 Sobic005G025800--Sobic001G226000 Sobic009G001100 Sobic009G001100 Sobic005G025800--Sobic009G001100 Sobic003G253400 Sobic003G253400 Sobic005G025800--Sobic003G253400 Sobic007G119900 Sobic007G119900 Sobic005G025800--Sobic007G119900 Sobic004G133700 Sobic004G133700 Sobic005G025800--Sobic004G133700 Sobic007G191700 Sobic007G191700 Sobic005G025800--Sobic007G191700 Sobic001G469800 Sobic001G469800 Sobic005G025800--Sobic001G469800 Sobic006G267300 Sobic006G267300 Sobic005G025800--Sobic006G267300 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic007G027700--Sobic006G267300 Sobic009G030300 Sobic009G030300 Sobic001G226000--Sobic009G030300 Sobic006G278700 Sobic006G278700 Sobic001G226000--Sobic006G278700 Sobic001G226000--Sobic006G267300 Sobic003G115100 Sobic003G115100 Sobic001G226000--Sobic003G115100 Sobic002G077900 Sobic002G077900 Sobic001G226000--Sobic002G077900 Sobic009G195200 Sobic009G195200 Sobic001G226000--Sobic009G195200 Sobic003G433500 Sobic003G433500 Sobic001G226000--Sobic003G433500 Sobic001G010600 Sobic001G010600 Sobic001G226000--Sobic001G010600 Sobic004G013600 Sobic004G013600 Sobic001G226000--Sobic004G013600 Sobic009G001100--Sobic005G025800 Sobic009G001100--Sobic007G191700 Sobic003G121300 Sobic003G121300 Sobic009G001100--Sobic003G121300 Sobic001G472100 Sobic001G472100 Sobic009G001100--Sobic001G472100 Sobic010G232900 Sobic010G232900 Sobic009G001100--Sobic010G232900 Sobic001G042200 Sobic001G042200 Sobic009G001100--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic009G001100--Sobic006G049100 Sobic006G248500 Sobic006G248500 Sobic009G001100--Sobic006G248500 Sobic010G237900 Sobic010G237900 Sobic009G001100--Sobic010G237900 Sobic003G253400--Sobic010G279900 Sobic003G062400 Sobic003G062400 Sobic003G253400--Sobic003G062400 Sobic003G253400--Sobic001G395100 Sobic005G040900 Sobic005G040900 Sobic003G253400--Sobic005G040900 Sobic003G253400--Sobic005G025800 Sobic009G192500 Sobic009G192500 Sobic003G253400--Sobic009G192500 Sobic004G347100 Sobic004G347100 Sobic003G253400--Sobic004G347100 Sobic007G183300 Sobic007G183300 Sobic003G253400--Sobic007G183300 Sobic008G058800 Sobic008G058800 Sobic003G253400--Sobic008G058800 Sobic007G119900--Sobic005G025800 Sobic003G083900 Sobic003G083900 Sobic007G119900--Sobic003G083900 Sobic007G119900--Sobic004G133700 Sobic001G152000 Sobic001G152000 Sobic007G119900--Sobic001G152000 Sobic007G119900--Sobic001G226000 Sobic002G253100 Sobic002G253100 Sobic007G119900--Sobic002G253100 Sobic007G119900--Sobic009G001100 Sobic001G291800 Sobic001G291800 Sobic007G119900--Sobic001G291800 Sobic001G168900 Sobic001G168900 Sobic007G119900--Sobic001G168900 Sobic004G133700--Sobic001G291800 Sobic004G133700--Sobic003G083900 Sobic004G133700--Sobic001G226000 Sobic004G133700--Sobic005G025800 Sobic004G133700--Sobic007G119900 Sobic005G199200 Sobic005G199200 Sobic004G133700--Sobic005G199200 Sobic004G133700--Sobic001G168900 Sobic004G133700--Sobic001G152000 Sobic004G133700--Sobic007G183300 Sobic007G191700--Sobic010G237900 Sobic007G091600 Sobic007G091600 Sobic007G191700--Sobic007G091600 Sobic004G129300 Sobic004G129300 Sobic007G191700--Sobic004G129300 Sobic007G191700--Sobic001G395100 Sobic005G079800 Sobic005G079800 Sobic007G191700--Sobic005G079800 Sobic010G279700 Sobic010G279700 Sobic007G191700--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic007G191700--Sobic006G118700 Sobic007G041300 Sobic007G041300 Sobic007G191700--Sobic007G041300 Sobic001G473600 Sobic001G473600 Sobic007G191700--Sobic001G473600 Sobic010G202600 Sobic010G202600 Sobic001G469800--Sobic010G202600 Sobic001G469800--Sobic006G248500 Sobic002G259800 Sobic002G259800 Sobic001G469800--Sobic002G259800 Sobic001G469800--Sobic001G395100 Sobic001G469800--Sobic003G433500 Sobic008G129700 Sobic008G129700 Sobic001G469800--Sobic008G129700 Sobic007G111100 Sobic007G111100 Sobic001G469800--Sobic007G111100 Sobic001G469800--Sobic006G267300 Sobic001G469800--Sobic008G127400 Sobic006G267300--Sobic007G111100 Sobic009G257800 Sobic009G257800 Sobic006G267300--Sobic009G257800 Sobic003G205501 Sobic003G205501 Sobic006G267300--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic006G267300--Sobic001G408700 Sobic006G267300--Sobic009G195200 Sobic007G118200 Sobic007G118200 Sobic006G267300--Sobic007G118200 Sobic006G267300--Sobic010G202600 Sobic006G267300--Sobic003G433500 Sobic006G267300--Sobic008G127400
Octagon: transcription factors


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