Gene annotation
Transcriptome id Sobic.004G133700.3
Synonym Sb04g012930
Functional annotation apoptosis inhibitor 5, putative, expressed
UniProt A0A1Z5RN99
Pfam PF05918
Panther DB PTHR12758 PTHR12758:SF19
NCBI CDD KOG2213; Apoptosis inhibitor 5/fibroblast growth factor 2-interacting factor 2, and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29030 : Apoptosis inhibitory protein 5 (API5)
RAP-DB (Rice) LOC_Os02g20930.1 : apoptosis inhibitor 5, putative, expressed
MaizeGDB (Corn) Zm00025a034315 , Zm00025a019454
Brachypodium KQJ94539
Barley HORVU0Hr1G015820.6 , HORVU0Hr1G015820.7 , HORVU0Hr1G015820.4 , HORVU0Hr1G015820.5 , HORVU0Hr1G015820.2 , HORVU0Hr1G015820.3 , HORVU0Hr1G015820.1
Wheat TraesCS6D02G180700 , TraesCS6D02G180700 , TraesCS6D02G180700 , TraesCS6D02G180700 , TraesCS6A02G196100 , TraesCS6A02G196100 , TraesCS6B02G233600 , TraesCS6B02G233600
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G133700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
2 Sobic.003G083900 metallo-beta-lactamase family protein, putative, expressed -
3 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
4 Sobic.005G025800 dual specificity protein phosphatase, putative, expressed K14819: DUSP12, dual specificity phosphatase 12
5 Sobic.007G119900 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta
6 Sobic.005G199200 nuclear pore protein 84/107 containing protein, expressed K14301: NUP107, nuclear pore complex protein Nup107
7 Sobic.001G168900 bacterial transferase hexapeptide domain containing protein, expressed K03241: translation initiation factor eIF-2B subunit gamma
8 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
9 Sobic.007G183300 expressed protein -
10 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
11 Sobic.006G049100 expressed protein -
12 Sobic.003G307900 BSD domain containing protein, expressed -
13 Sobic.006G087100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14943: muscleblind
14 Sobic.001G346300 WD domain, G-beta repeat domain containing protein, expressed K12816: CDC40, pre-mRNA-processing factor 17
15 Sobic.001G527300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
16 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
17 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
18 Sobic.003G412300 expressed protein -
19 Sobic.001G335500 RNA-binding protein-like, putative, expressed -
20 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E


Gene co-expression network
sample Sobic004G133700 Sobic004G133700 Sobic001G291800 Sobic001G291800 Sobic004G133700--Sobic001G291800 Sobic003G083900 Sobic003G083900 Sobic004G133700--Sobic003G083900 Sobic001G226000 Sobic001G226000 Sobic004G133700--Sobic001G226000 Sobic005G025800 Sobic005G025800 Sobic004G133700--Sobic005G025800 Sobic007G119900 Sobic007G119900 Sobic004G133700--Sobic007G119900 Sobic005G199200 Sobic005G199200 Sobic004G133700--Sobic005G199200 Sobic001G168900 Sobic001G168900 Sobic004G133700--Sobic001G168900 Sobic001G152000 Sobic001G152000 Sobic004G133700--Sobic001G152000 Sobic007G183300 Sobic007G183300 Sobic004G133700--Sobic007G183300 Sobic004G340400 Sobic004G340400 Sobic001G291800--Sobic004G340400 Sobic001G145400 Sobic001G145400 Sobic001G291800--Sobic001G145400 Sobic005G115500 Sobic005G115500 Sobic001G291800--Sobic005G115500 Sobic004G353000 Sobic004G353000 Sobic001G291800--Sobic004G353000 Sobic010G186600 Sobic010G186600 Sobic001G291800--Sobic010G186600 Sobic009G255600 Sobic009G255600 Sobic001G291800--Sobic009G255600 Sobic008G147200 Sobic008G147200 Sobic001G291800--Sobic008G147200 Sobic007G039400 Sobic007G039400 Sobic001G291800--Sobic007G039400 Sobic001G291800--Sobic001G168900 Sobic003G083900--Sobic004G133700 Sobic003G307900 Sobic003G307900 Sobic003G083900--Sobic003G307900 Sobic003G083900--Sobic007G119900 Sobic003G083900--Sobic001G226000 Sobic002G077900 Sobic002G077900 Sobic003G083900--Sobic002G077900 Sobic001G009800 Sobic001G009800 Sobic003G083900--Sobic001G009800 Sobic004G249300 Sobic004G249300 Sobic003G083900--Sobic004G249300 Sobic003G083900--Sobic005G025800 Sobic001G115500 Sobic001G115500 Sobic003G083900--Sobic001G115500 Sobic009G030300 Sobic009G030300 Sobic001G226000--Sobic009G030300 Sobic006G278700 Sobic006G278700 Sobic001G226000--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G226000--Sobic006G267300 Sobic003G115100 Sobic003G115100 Sobic001G226000--Sobic003G115100 Sobic001G226000--Sobic002G077900 Sobic009G195200 Sobic009G195200 Sobic001G226000--Sobic009G195200 Sobic003G433500 Sobic003G433500 Sobic001G226000--Sobic003G433500 Sobic001G010600 Sobic001G010600 Sobic001G226000--Sobic001G010600 Sobic004G013600 Sobic004G013600 Sobic001G226000--Sobic004G013600 Sobic007G027700 Sobic007G027700 Sobic005G025800--Sobic007G027700 Sobic005G025800--Sobic001G226000 Sobic009G001100 Sobic009G001100 Sobic005G025800--Sobic009G001100 Sobic003G253400 Sobic003G253400 Sobic005G025800--Sobic003G253400 Sobic005G025800--Sobic007G119900 Sobic005G025800--Sobic004G133700 Sobic007G191700 Sobic007G191700 Sobic005G025800--Sobic007G191700 Sobic001G469800 Sobic001G469800 Sobic005G025800--Sobic001G469800 Sobic005G025800--Sobic006G267300 Sobic007G119900--Sobic005G025800 Sobic007G119900--Sobic003G083900 Sobic007G119900--Sobic004G133700 Sobic007G119900--Sobic001G152000 Sobic007G119900--Sobic001G226000 Sobic002G253100 Sobic002G253100 Sobic007G119900--Sobic002G253100 Sobic007G119900--Sobic009G001100 Sobic007G119900--Sobic001G291800 Sobic007G119900--Sobic001G168900 Sobic001G090300 Sobic001G090300 Sobic005G199200--Sobic001G090300 Sobic003G184400 Sobic003G184400 Sobic005G199200--Sobic003G184400 Sobic004G128200 Sobic004G128200 Sobic005G199200--Sobic004G128200 Sobic001G334100 Sobic001G334100 Sobic005G199200--Sobic001G334100 Sobic009G104900 Sobic009G104900 Sobic005G199200--Sobic009G104900 Sobic001G373000 Sobic001G373000 Sobic005G199200--Sobic001G373000 Sobic010G278600 Sobic010G278600 Sobic005G199200--Sobic010G278600 Sobic002G142600 Sobic002G142600 Sobic005G199200--Sobic002G142600 Sobic003G246000 Sobic003G246000 Sobic005G199200--Sobic003G246000 Sobic007G187600 Sobic007G187600 Sobic001G168900--Sobic007G187600 Sobic004G307500 Sobic004G307500 Sobic001G168900--Sobic004G307500 Sobic001G168900--Sobic002G077900 Sobic001G168900--Sobic001G291800 Sobic009G258400 Sobic009G258400 Sobic001G168900--Sobic009G258400 Sobic001G042200 Sobic001G042200 Sobic001G168900--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic001G168900--Sobic006G049100 Sobic004G346100 Sobic004G346100 Sobic001G168900--Sobic004G346100 Sobic003G132000 Sobic003G132000 Sobic001G168900--Sobic003G132000 Sobic002G268400 Sobic002G268400 Sobic001G152000--Sobic002G268400 Sobic004G074300 Sobic004G074300 Sobic001G152000--Sobic004G074300 Sobic009G033900 Sobic009G033900 Sobic001G152000--Sobic009G033900 Sobic001G294900 Sobic001G294900 Sobic001G152000--Sobic001G294900 Sobic004G019600 Sobic004G019600 Sobic001G152000--Sobic004G019600 Sobic006G252100 Sobic006G252100 Sobic001G152000--Sobic006G252100 Sobic001G152000--Sobic001G009800 Sobic003G405700 Sobic003G405700 Sobic001G152000--Sobic003G405700 Sobic006G183000 Sobic006G183000 Sobic001G152000--Sobic006G183000 Sobic005G200800 Sobic005G200800 Sobic007G183300--Sobic005G200800 Sobic002G145800 Sobic002G145800 Sobic007G183300--Sobic002G145800 Sobic003G416700 Sobic003G416700 Sobic007G183300--Sobic003G416700 Sobic003G214600 Sobic003G214600 Sobic007G183300--Sobic003G214600 Sobic010G279900 Sobic010G279900 Sobic007G183300--Sobic010G279900 Sobic002G154000 Sobic002G154000 Sobic007G183300--Sobic002G154000 Sobic005G220000 Sobic005G220000 Sobic007G183300--Sobic005G220000 Sobic007G168300 Sobic007G168300 Sobic007G183300--Sobic007G168300 Sobic001G051700 Sobic001G051700 Sobic007G183300--Sobic001G051700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.