Gene annotation
Transcriptome id Sobic.003G083900.3,Sobic.003G083900.1,Sobic.003G083900.2
Synonym Sb03g007070
Functional annotation metallo-beta-lactamase family protein, putative, expressed
UniProt A0A1B6Q205 , A0A1B6Q202
Pfam PF12706
Panther DB PTHR23131 PTHR23131:SF2
NCBI CDD KOG0813; Glyoxylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G25375 : Metallo-hydrolase/oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os01g04200.1,LOC_Os01g04200.2 : metallo-beta-lactamase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023584
Brachypodium PNT69887 , PNT69889 , PNT69888 , KQK02555 , KQK02554 , KQK02557 , KQK02556
Barley -
Wheat TraesCS3B02G047100 , TraesCS3A02G036800 , TraesCS3B02G047100 , TraesCS3A02G036800 , TraesCS3D02G043300 , TraesCS3D02G043300
Populus -


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cDNA sequences
Sobic.003G083900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G133700 apoptosis inhibitor 5, putative, expressed -
2 Sobic.003G307900 BSD domain containing protein, expressed -
3 Sobic.007G119900 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta
4 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
5 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E
6 Sobic.001G009800 N-rich protein, putative, expressed -
7 Sobic.004G249300 proteasome subunit, putative, expressed K15030: translation initiation factor 3 subunit M
8 Sobic.005G025800 dual specificity protein phosphatase, putative, expressed K14819: DUSP12, dual specificity phosphatase 12
9 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
10 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
11 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
12 Sobic.006G087100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14943: muscleblind
13 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
14 Sobic.006G278700 expressed protein -
15 Sobic.001G544100 peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed -
16 Sobic.005G047200 Trihelix Family(PubMedID : 24864043)@homeodomain, putative, expressed -
17 Sobic.005G187500 GRF-interacting factor 2, putative, expressed -
18 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
19 Sobic.002G130900 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
20 Sobic.004G260400 expressed protein K07018: uncharacterized protein


Gene co-expression network
sample Sobic003G083900 Sobic003G083900 Sobic004G133700 Sobic004G133700 Sobic003G083900--Sobic004G133700 Sobic003G307900 Sobic003G307900 Sobic003G083900--Sobic003G307900 Sobic007G119900 Sobic007G119900 Sobic003G083900--Sobic007G119900 Sobic001G226000 Sobic001G226000 Sobic003G083900--Sobic001G226000 Sobic002G077900 Sobic002G077900 Sobic003G083900--Sobic002G077900 Sobic001G009800 Sobic001G009800 Sobic003G083900--Sobic001G009800 Sobic004G249300 Sobic004G249300 Sobic003G083900--Sobic004G249300 Sobic005G025800 Sobic005G025800 Sobic003G083900--Sobic005G025800 Sobic001G115500 Sobic001G115500 Sobic003G083900--Sobic001G115500 Sobic001G291800 Sobic001G291800 Sobic004G133700--Sobic001G291800 Sobic004G133700--Sobic003G083900 Sobic004G133700--Sobic001G226000 Sobic004G133700--Sobic005G025800 Sobic004G133700--Sobic007G119900 Sobic005G199200 Sobic005G199200 Sobic004G133700--Sobic005G199200 Sobic001G168900 Sobic001G168900 Sobic004G133700--Sobic001G168900 Sobic001G152000 Sobic001G152000 Sobic004G133700--Sobic001G152000 Sobic007G183300 Sobic007G183300 Sobic004G133700--Sobic007G183300 Sobic003G307900--Sobic003G083900 Sobic008G125000 Sobic008G125000 Sobic003G307900--Sobic008G125000 Sobic003G307900--Sobic004G133700 Sobic001G370300 Sobic001G370300 Sobic003G307900--Sobic001G370300 Sobic006G087100 Sobic006G087100 Sobic003G307900--Sobic006G087100 Sobic004G057800 Sobic004G057800 Sobic003G307900--Sobic004G057800 Sobic001G285300 Sobic001G285300 Sobic003G307900--Sobic001G285300 Sobic005G187500 Sobic005G187500 Sobic003G307900--Sobic005G187500 Sobic007G010900 Sobic007G010900 Sobic003G307900--Sobic007G010900 Sobic007G119900--Sobic005G025800 Sobic007G119900--Sobic003G083900 Sobic007G119900--Sobic004G133700 Sobic007G119900--Sobic001G152000 Sobic007G119900--Sobic001G226000 Sobic002G253100 Sobic002G253100 Sobic007G119900--Sobic002G253100 Sobic009G001100 Sobic009G001100 Sobic007G119900--Sobic009G001100 Sobic007G119900--Sobic001G291800 Sobic007G119900--Sobic001G168900 Sobic009G030300 Sobic009G030300 Sobic001G226000--Sobic009G030300 Sobic006G278700 Sobic006G278700 Sobic001G226000--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G226000--Sobic006G267300 Sobic003G115100 Sobic003G115100 Sobic001G226000--Sobic003G115100 Sobic001G226000--Sobic002G077900 Sobic009G195200 Sobic009G195200 Sobic001G226000--Sobic009G195200 Sobic003G433500 Sobic003G433500 Sobic001G226000--Sobic003G433500 Sobic001G010600 Sobic001G010600 Sobic001G226000--Sobic001G010600 Sobic004G013600 Sobic004G013600 Sobic001G226000--Sobic004G013600 Sobic002G077900--Sobic001G168900 Sobic002G077900--Sobic001G226000 Sobic002G077900--Sobic001G370300 Sobic003G420700 Sobic003G420700 Sobic002G077900--Sobic003G420700 Sobic004G307500 Sobic004G307500 Sobic002G077900--Sobic004G307500 Sobic009G058500 Sobic009G058500 Sobic002G077900--Sobic009G058500 Sobic009G258400 Sobic009G258400 Sobic002G077900--Sobic009G258400 Sobic006G044600 Sobic006G044600 Sobic002G077900--Sobic006G044600 Sobic010G193800 Sobic010G193800 Sobic002G077900--Sobic010G193800 Sobic001G009800--Sobic010G193800 Sobic001G009800--Sobic001G152000 Sobic006G183000 Sobic006G183000 Sobic001G009800--Sobic006G183000 Sobic002G268400 Sobic002G268400 Sobic001G009800--Sobic002G268400 Sobic001G038100 Sobic001G038100 Sobic001G009800--Sobic001G038100 Sobic001G532100 Sobic001G532100 Sobic001G009800--Sobic001G532100 Sobic004G260400 Sobic004G260400 Sobic001G009800--Sobic004G260400 Sobic003G405700 Sobic003G405700 Sobic001G009800--Sobic003G405700 Sobic009G140700 Sobic009G140700 Sobic001G009800--Sobic009G140700 Sobic002G341800 Sobic002G341800 Sobic004G249300--Sobic002G341800 Sobic009G201800 Sobic009G201800 Sobic004G249300--Sobic009G201800 Sobic004G249300--Sobic001G115500 Sobic004G249300--Sobic002G077900 Sobic008G083400 Sobic008G083400 Sobic004G249300--Sobic008G083400 Sobic010G247400 Sobic010G247400 Sobic004G249300--Sobic010G247400 Sobic003G118400 Sobic003G118400 Sobic004G249300--Sobic003G118400 Sobic009G102900 Sobic009G102900 Sobic004G249300--Sobic009G102900 Sobic004G249300--Sobic001G370300 Sobic007G027700 Sobic007G027700 Sobic005G025800--Sobic007G027700 Sobic005G025800--Sobic001G226000 Sobic005G025800--Sobic009G001100 Sobic003G253400 Sobic003G253400 Sobic005G025800--Sobic003G253400 Sobic005G025800--Sobic007G119900 Sobic005G025800--Sobic004G133700 Sobic007G191700 Sobic007G191700 Sobic005G025800--Sobic007G191700 Sobic001G469800 Sobic001G469800 Sobic005G025800--Sobic001G469800 Sobic005G025800--Sobic006G267300 Sobic001G115500--Sobic008G125000 Sobic001G008500 Sobic001G008500 Sobic001G115500--Sobic001G008500 Sobic003G008600 Sobic003G008600 Sobic001G115500--Sobic003G008600 Sobic001G115500--Sobic004G249300 Sobic001G115500--Sobic009G102900 Sobic002G208400 Sobic002G208400 Sobic001G115500--Sobic002G208400 Sobic002G264300 Sobic002G264300 Sobic001G115500--Sobic002G264300 Sobic001G436300 Sobic001G436300 Sobic001G115500--Sobic001G436300 Sobic001G373000 Sobic001G373000 Sobic001G115500--Sobic001G373000
Octagon: transcription factors


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