Gene annotation
Transcriptome id Sobic.007G056700.2,Sobic.007G056700.1
Synonym PLT2, Sb07g004580
Functional annotation AP2/EREBP transcription factor BABY BOOM, putative, expressed
UniProt A0A1B6PFT9 , A0A1B6PFT0
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF16
NCBI CDD -
KEGG Orthology K09285; OVM, AP2-like factor, ANT lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT1G51190 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g67410.1 : AP2/EREBP transcription factor BABY BOOM, putative, expressed
MaizeGDB (Corn) Zm00025a055039
Brachypodium PNT74070 , PNT74069 , PNT74068 , PNT74067 , KQJ95219 , PNT66701
Barley HORVU7Hr1G070230.7 , HORVU7Hr1G070230.6 , HORVU7Hr1G070230.15 , HORVU7Hr1G070230.14 , HORVU7Hr1G070230.17 , HORVU7Hr1G070230.16 , HORVU7Hr1G070230.11 , HORVU7Hr1G070230.10 , HORVU7Hr1G070230.13 , HORVU7Hr1G070230.12 , HORVU7Hr1G070230.19 , HORVU7Hr1G070230.18 , HORVU7Hr1G070230.1 , HORVU7Hr1G070230.3 , HORVU7Hr1G070230.2 , HORVU7Hr1G070230.5 , HORVU7Hr1G070230.9 , HORVU7Hr1G070230.8 , HORVU7Hr1G070230.4
Wheat TraesCS7B02G186900 , TraesCS7B02G186900 , TraesCS7A02G293000 , TraesCS7D02G292500 , TraesCS7A02G292900
Populus -


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cDNA sequences
Sobic.007G056700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G096000 OsDegp10 - Putative Deg protease homologue, expressed -
2 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
3 Sobic.009G126600 cyclin-dependent kinase D-1, putative, expressed K02202: cyclin-dependent kinase 7
4 Sobic.001G267900 - -
5 Sobic.001G518400 EF hand family protein, putative, expressed -
6 Sobic.003G205501 - -
7 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
8 Sobic.001G085700 STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
9 Sobic.010G204400 phox domain-containing protein, putative, expressed -
10 Sobic.006G165000 RNA recognition motif containing protein, expressed -
11 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
12 Sobic.005G114400 TBC domain containing protein, expressed -
13 Sobic.003G160000 SUMO protease, putative, expressed K08592: sentrin-specific protease 1
14 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
15 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
16 Sobic.007G027700 expressed protein -
17 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
18 Sobic.006G082900 expressed protein -
19 Sobic.001G424600 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
20 Sobic.009G158100 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial


Gene co-expression network
sample Sobic007G056700 Sobic007G056700 Sobic010G096000 Sobic010G096000 Sobic007G056700--Sobic010G096000 Sobic003G241200 Sobic003G241200 Sobic007G056700--Sobic003G241200 Sobic009G126600 Sobic009G126600 Sobic007G056700--Sobic009G126600 Sobic001G267900 Sobic001G267900 Sobic007G056700--Sobic001G267900 Sobic001G518400 Sobic001G518400 Sobic007G056700--Sobic001G518400 Sobic003G205501 Sobic003G205501 Sobic007G056700--Sobic003G205501 Sobic009G074700 Sobic009G074700 Sobic007G056700--Sobic009G074700 Sobic001G085700 Sobic001G085700 Sobic007G056700--Sobic001G085700 Sobic010G204400 Sobic010G204400 Sobic007G056700--Sobic010G204400 Sobic001G246500 Sobic001G246500 Sobic010G096000--Sobic001G246500 Sobic008G100100 Sobic008G100100 Sobic010G096000--Sobic008G100100 Sobic004G086200 Sobic004G086200 Sobic010G096000--Sobic004G086200 Sobic001G306900 Sobic001G306900 Sobic010G096000--Sobic001G306900 Sobic001G346900 Sobic001G346900 Sobic010G096000--Sobic001G346900 Sobic008G173100 Sobic008G173100 Sobic010G096000--Sobic008G173100 Sobic003G416700 Sobic003G416700 Sobic010G096000--Sobic003G416700 Sobic001G155400 Sobic001G155400 Sobic010G096000--Sobic001G155400 Sobic008G147200 Sobic008G147200 Sobic010G096000--Sobic008G147200 Sobic004G084300 Sobic004G084300 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic006G032400 Sobic006G032400 Sobic003G241200--Sobic006G032400 Sobic002G248400 Sobic002G248400 Sobic003G241200--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic003G241200--Sobic002G320500 Sobic003G173950 Sobic003G173950 Sobic003G241200--Sobic003G173950 Sobic010G236400 Sobic010G236400 Sobic003G241200--Sobic010G236400 Sobic003G200200 Sobic003G200200 Sobic003G241200--Sobic003G200200 Sobic002G157000 Sobic002G157000 Sobic003G241200--Sobic002G157000 Sobic001G222500 Sobic001G222500 Sobic009G126600--Sobic001G222500 Sobic010G185400 Sobic010G185400 Sobic009G126600--Sobic010G185400 Sobic009G126600--Sobic006G165000 Sobic001G155000 Sobic001G155000 Sobic009G126600--Sobic001G155000 Sobic002G357700 Sobic002G357700 Sobic009G126600--Sobic002G357700 Sobic001G407200 Sobic001G407200 Sobic009G126600--Sobic001G407200 Sobic008G149800 Sobic008G149800 Sobic009G126600--Sobic008G149800 Sobic009G126600--Sobic003G241200 Sobic005G013200 Sobic005G013200 Sobic009G126600--Sobic005G013200 Sobic010G056000 Sobic010G056000 Sobic001G267900--Sobic010G056000 Sobic001G267900--Sobic006G165000 Sobic003G084900 Sobic003G084900 Sobic001G267900--Sobic003G084900 Sobic010G028800 Sobic010G028800 Sobic001G267900--Sobic010G028800 Sobic001G267900--Sobic001G518400 Sobic001G267900--Sobic003G241200 Sobic001G094000 Sobic001G094000 Sobic001G267900--Sobic001G094000 Sobic006G222300 Sobic006G222300 Sobic001G267900--Sobic006G222300 Sobic001G362200 Sobic001G362200 Sobic001G267900--Sobic001G362200 Sobic001G170100 Sobic001G170100 Sobic001G518400--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic001G518400--Sobic006G138000 Sobic001G335900 Sobic001G335900 Sobic001G518400--Sobic001G335900 Sobic001G078100 Sobic001G078100 Sobic001G518400--Sobic001G078100 Sobic009G229600 Sobic009G229600 Sobic001G518400--Sobic009G229600 Sobic010G275500 Sobic010G275500 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic003G126600 Sobic003G126600 Sobic001G518400--Sobic003G126600 Sobic001G369000 Sobic001G369000 Sobic001G518400--Sobic001G369000 Sobic001G408700 Sobic001G408700 Sobic003G205501--Sobic001G408700 Sobic006G128800 Sobic006G128800 Sobic003G205501--Sobic006G128800 Sobic004G345700 Sobic004G345700 Sobic003G205501--Sobic004G345700 Sobic006G267300 Sobic006G267300 Sobic003G205501--Sobic006G267300 Sobic010G202600 Sobic010G202600 Sobic003G205501--Sobic010G202600 Sobic010G245000 Sobic010G245000 Sobic003G205501--Sobic010G245000 Sobic008G127400 Sobic008G127400 Sobic003G205501--Sobic008G127400 Sobic008G058800 Sobic008G058800 Sobic003G205501--Sobic008G058800 Sobic003G248500 Sobic003G248500 Sobic003G205501--Sobic003G248500 Sobic009G074700--Sobic001G246500 Sobic009G074700--Sobic010G202600 Sobic010G278600 Sobic010G278600 Sobic009G074700--Sobic010G278600 Sobic006G180700 Sobic006G180700 Sobic009G074700--Sobic006G180700 Sobic002G259800 Sobic002G259800 Sobic009G074700--Sobic002G259800 Sobic009G000400 Sobic009G000400 Sobic009G074700--Sobic009G000400 Sobic002G262700 Sobic002G262700 Sobic009G074700--Sobic002G262700 Sobic009G195200 Sobic009G195200 Sobic009G074700--Sobic009G195200 Sobic009G074700--Sobic006G138000 Sobic001G085700--Sobic001G518400 Sobic001G085700--Sobic006G180700 Sobic001G085700--Sobic006G138000 Sobic001G085700--Sobic001G335900 Sobic001G085700--Sobic001G170100 Sobic001G085700--Sobic007G056700 Sobic001G085700--Sobic010G275500 Sobic001G085700--Sobic009G074700 Sobic001G085700--Sobic001G267900 Sobic006G163800 Sobic006G163800 Sobic010G204400--Sobic006G163800 Sobic006G195700 Sobic006G195700 Sobic010G204400--Sobic006G195700 Sobic007G218000 Sobic007G218000 Sobic010G204400--Sobic007G218000 Sobic008G153000 Sobic008G153000 Sobic010G204400--Sobic008G153000 Sobic010G204400--Sobic010G236400 Sobic007G132100 Sobic007G132100 Sobic010G204400--Sobic007G132100 Sobic010G204400--Sobic003G416700 Sobic006G131000 Sobic006G131000 Sobic010G204400--Sobic006G131000 Sobic010G116600 Sobic010G116600 Sobic010G204400--Sobic010G116600
Octagon: transcription factors


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