Gene annotation
Transcriptome id Sobic.001G085700.1
Synonym SIK1, Sb01g007720
Functional annotation STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt Q8LKU7
Pfam PF00069
Panther DB PTHR24361 PTHR24361:SF268
NCBI CDD KOG0576; Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G69220 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g54780.1 : STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a008204
Brachypodium PNT74122 , PNT74120 , PNT74121 , KQK13139
Barley HORVU5Hr1G095970.5 , HORVU5Hr1G095970.3 , HORVU5Hr1G095970.11 , HORVU5Hr1G095970.10 , HORVU5Hr1G095970.13 , HORVU5Hr1G095970.12 , HORVU5Hr1G095970.15 , HORVU5Hr1G095970.14 , HORVU5Hr1G095970.16 , HORVU5Hr1G095970.4 , HORVU5Hr1G095970.7 , HORVU5Hr1G095970.6 , HORVU5Hr1G095970.1 , HORVU5Hr1G095970.2 , HORVU5Hr1G095970.9 , HORVU5Hr1G095970.8
Wheat TraesCS5B02G397300 , TraesCS5A02G392500 , TraesCS5D02G402300
Populus -


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cDNA sequences
Sobic.001G085700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G518400 EF hand family protein, putative, expressed -
2 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
3 Sobic.006G138000 expressed protein -
4 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
5 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
6 Sobic.007G056700 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
7 Sobic.010G275500 EF hand family protein, putative, expressed -
8 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
9 Sobic.001G267900 - -
10 Sobic.009G000400 expressed protein -
11 Sobic.010G204400 phox domain-containing protein, putative, expressed -
12 Sobic.003G187500 ATP-binding region, ATPase-like domain containing protein, expressed -
13 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
14 Sobic.006G195700 WD domain, G-beta repeat domain containing protein, expressed K14962: WDR82, SWD2, COMPASS component SWD2
15 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
16 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
17 Sobic.006G281700 DUF803 domain containing, putative, expressed -
18 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
19 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
20 Sobic.001G308400 expressed protein -


Gene co-expression network
sample Sobic001G085700 Sobic001G085700 Sobic001G518400 Sobic001G518400 Sobic001G085700--Sobic001G518400 Sobic006G180700 Sobic006G180700 Sobic001G085700--Sobic006G180700 Sobic006G138000 Sobic006G138000 Sobic001G085700--Sobic006G138000 Sobic001G335900 Sobic001G335900 Sobic001G085700--Sobic001G335900 Sobic001G170100 Sobic001G170100 Sobic001G085700--Sobic001G170100 Sobic007G056700 Sobic007G056700 Sobic001G085700--Sobic007G056700 Sobic010G275500 Sobic010G275500 Sobic001G085700--Sobic010G275500 Sobic009G074700 Sobic009G074700 Sobic001G085700--Sobic009G074700 Sobic001G267900 Sobic001G267900 Sobic001G085700--Sobic001G267900 Sobic001G518400--Sobic001G170100 Sobic001G518400--Sobic006G138000 Sobic001G518400--Sobic001G335900 Sobic001G078100 Sobic001G078100 Sobic001G518400--Sobic001G078100 Sobic009G229600 Sobic009G229600 Sobic001G518400--Sobic009G229600 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic003G126600 Sobic003G126600 Sobic001G518400--Sobic003G126600 Sobic001G369000 Sobic001G369000 Sobic001G518400--Sobic001G369000 Sobic006G180700--Sobic009G074700 Sobic006G180700--Sobic001G085700 Sobic006G180700--Sobic006G138000 Sobic009G040800 Sobic009G040800 Sobic006G180700--Sobic009G040800 Sobic009G000400 Sobic009G000400 Sobic006G180700--Sobic009G000400 Sobic006G180700--Sobic001G335900 Sobic009G045200 Sobic009G045200 Sobic006G180700--Sobic009G045200 Sobic006G091000 Sobic006G091000 Sobic006G180700--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic006G180700--Sobic005G040900 Sobic006G138000--Sobic001G170100 Sobic006G138000--Sobic001G518400 Sobic006G138000--Sobic001G335900 Sobic006G138000--Sobic001G369000 Sobic006G138000--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic006G138000--Sobic003G240700 Sobic003G187500 Sobic003G187500 Sobic006G138000--Sobic003G187500 Sobic001G426600 Sobic001G426600 Sobic006G138000--Sobic001G426600 Sobic010G053800 Sobic010G053800 Sobic006G138000--Sobic010G053800 Sobic001G335900--Sobic001G369000 Sobic001G335900--Sobic006G138000 Sobic001G335900--Sobic001G518400 Sobic001G335900--Sobic001G170100 Sobic001G335900--Sobic003G240700 Sobic001G335900--Sobic009G229600 Sobic009G049400 Sobic009G049400 Sobic001G335900--Sobic009G049400 Sobic007G120500 Sobic007G120500 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100 Sobic001G170100--Sobic006G138000 Sobic001G170100--Sobic001G518400 Sobic001G170100--Sobic001G426600 Sobic001G170100--Sobic001G335900 Sobic001G170100--Sobic001G369000 Sobic001G170100--Sobic010G275500 Sobic001G170100--Sobic003G240700 Sobic010G147833 Sobic010G147833 Sobic001G170100--Sobic010G147833 Sobic007G019300 Sobic007G019300 Sobic001G170100--Sobic007G019300 Sobic010G096000 Sobic010G096000 Sobic007G056700--Sobic010G096000 Sobic003G241200 Sobic003G241200 Sobic007G056700--Sobic003G241200 Sobic009G126600 Sobic009G126600 Sobic007G056700--Sobic009G126600 Sobic007G056700--Sobic001G267900 Sobic007G056700--Sobic001G518400 Sobic003G205501 Sobic003G205501 Sobic007G056700--Sobic003G205501 Sobic007G056700--Sobic009G074700 Sobic007G056700--Sobic001G085700 Sobic010G204400 Sobic010G204400 Sobic007G056700--Sobic010G204400 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic001G246500 Sobic001G246500 Sobic009G074700--Sobic001G246500 Sobic010G202600 Sobic010G202600 Sobic009G074700--Sobic010G202600 Sobic010G278600 Sobic010G278600 Sobic009G074700--Sobic010G278600 Sobic009G074700--Sobic006G180700 Sobic002G259800 Sobic002G259800 Sobic009G074700--Sobic002G259800 Sobic009G074700--Sobic009G000400 Sobic002G262700 Sobic002G262700 Sobic009G074700--Sobic002G262700 Sobic009G195200 Sobic009G195200 Sobic009G074700--Sobic009G195200 Sobic009G074700--Sobic006G138000 Sobic010G056000 Sobic010G056000 Sobic001G267900--Sobic010G056000 Sobic006G165000 Sobic006G165000 Sobic001G267900--Sobic006G165000 Sobic003G084900 Sobic003G084900 Sobic001G267900--Sobic003G084900 Sobic010G028800 Sobic010G028800 Sobic001G267900--Sobic010G028800 Sobic001G267900--Sobic001G518400 Sobic001G267900--Sobic003G241200 Sobic001G094000 Sobic001G094000 Sobic001G267900--Sobic001G094000 Sobic006G222300 Sobic006G222300 Sobic001G267900--Sobic006G222300 Sobic001G362200 Sobic001G362200 Sobic001G267900--Sobic001G362200
Octagon: transcription factors


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