Gene annotation
Transcriptome id Sobic.001G011300.1
Synonym Sb01g001110
Functional annotation expressed protein
UniProt C5WSV7
Pfam -
Panther DB PTHR33880 PTHR33880:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14100 : transferases, transferring glycosyl groups
RAP-DB (Rice) LOC_Os03g63380.1 : expressed protein
MaizeGDB (Corn) Zm00025a009034
Brachypodium -
Barley HORVU5Hr1G122070.1 , HORVU5Hr1G122070.3 , HORVU5Hr1G122070.2 , HORVU5Hr1G122070.4
Wheat TraesCS4A02G333400 , TraesCS5B02G552600 , TraesCS5D02G538800
Populus -


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cDNA sequences
Sobic.001G011300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G306700 PPR repeat domain containing protein, putative, expressed -
2 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
3 Sobic.004G070800 tic21, putative, expressed -
4 Sobic.010G091200 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
5 Sobic.001G463500 FAD-linked sulfhydryl oxidase ALR, putative, expressed K17783: ERV1, GFER, mitochondrial FAD-linked sulfhydryl oxidase
6 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
7 Sobic.001G008700 DUF565 domain containing protein, putative, expressed -
8 Sobic.004G068300 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
9 Sobic.004G015700 serine/threonine-protein kinase receptor precursor, putative, expressed -
10 Sobic.006G155700 ABC transporter(PubMedID : 23463491)@white-brown complex homolog protein 11, putative, expressed -
11 Sobic.002G064400 expressed protein -
12 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase
13 Sobic.003G261200 formyl transferase, putative, expressed K00604: MTFMT, methionyl-tRNA formyltransferase
14 Sobic.001G371700 zinc finger protein, putative, expressed -
15 Sobic.004G327800 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
16 Sobic.002G333100 transmembrane protein, putative, expressed -
17 Sobic.006G003951 - -
18 Sobic.003G383500 rhodanese-like, putative, expressed -
19 Sobic.002G242600 expressed protein -
20 Sobic.003G439100 mitochondrial carrier protein, putative, expressed -


Gene co-expression network
sample Sobic001G011300 Sobic001G011300 Sobic001G306700 Sobic001G306700 Sobic001G011300--Sobic001G306700 Sobic003G265500 Sobic003G265500 Sobic001G011300--Sobic003G265500 Sobic004G070800 Sobic004G070800 Sobic001G011300--Sobic004G070800 Sobic010G091200 Sobic010G091200 Sobic001G011300--Sobic010G091200 Sobic001G463500 Sobic001G463500 Sobic001G011300--Sobic001G463500 Sobic003G420900 Sobic003G420900 Sobic001G011300--Sobic003G420900 Sobic001G008700 Sobic001G008700 Sobic001G011300--Sobic001G008700 Sobic004G068300 Sobic004G068300 Sobic001G011300--Sobic004G068300 Sobic004G015700 Sobic004G015700 Sobic001G011300--Sobic004G015700 Sobic001G306700--Sobic001G011300 Sobic001G296400 Sobic001G296400 Sobic001G306700--Sobic001G296400 Sobic001G306700--Sobic003G265500 Sobic001G306700--Sobic001G463500 Sobic003G071600 Sobic003G071600 Sobic001G306700--Sobic003G071600 Sobic001G063800 Sobic001G063800 Sobic001G306700--Sobic001G063800 Sobic006G037300 Sobic006G037300 Sobic001G306700--Sobic006G037300 Sobic001G306700--Sobic003G420900 Sobic002G064400 Sobic002G064400 Sobic001G306700--Sobic002G064400 Sobic003G225100 Sobic003G225100 Sobic003G265500--Sobic003G225100 Sobic005G184300 Sobic005G184300 Sobic003G265500--Sobic005G184300 Sobic003G085000 Sobic003G085000 Sobic003G265500--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic003G265500--Sobic001G424300 Sobic010G221600 Sobic010G221600 Sobic003G265500--Sobic010G221600 Sobic004G307400 Sobic004G307400 Sobic003G265500--Sobic004G307400 Sobic004G065300 Sobic004G065300 Sobic003G265500--Sobic004G065300 Sobic002G353300 Sobic002G353300 Sobic003G265500--Sobic002G353300 Sobic001G104800 Sobic001G104800 Sobic003G265500--Sobic001G104800 Sobic003G383500 Sobic003G383500 Sobic004G070800--Sobic003G383500 Sobic007G013400 Sobic007G013400 Sobic004G070800--Sobic007G013400 Sobic004G109000 Sobic004G109000 Sobic004G070800--Sobic004G109000 Sobic004G070800--Sobic004G015700 Sobic001G357200 Sobic001G357200 Sobic004G070800--Sobic001G357200 Sobic003G261200 Sobic003G261200 Sobic004G070800--Sobic003G261200 Sobic001G104300 Sobic001G104300 Sobic004G070800--Sobic001G104300 Sobic007G211100 Sobic007G211100 Sobic004G070800--Sobic007G211100 Sobic006G114300 Sobic006G114300 Sobic004G070800--Sobic006G114300 Sobic010G091200--Sobic005G184300 Sobic004G040600 Sobic004G040600 Sobic010G091200--Sobic004G040600 Sobic002G065200 Sobic002G065200 Sobic010G091200--Sobic002G065200 Sobic003G128400 Sobic003G128400 Sobic010G091200--Sobic003G128400 Sobic002G297400 Sobic002G297400 Sobic010G091200--Sobic002G297400 Sobic003G439000 Sobic003G439000 Sobic010G091200--Sobic003G439000 Sobic010G091200--Sobic003G265500 Sobic001G514100 Sobic001G514100 Sobic010G091200--Sobic001G514100 Sobic006G256600 Sobic006G256600 Sobic010G091200--Sobic006G256600 Sobic004G296800 Sobic004G296800 Sobic001G463500--Sobic004G296800 Sobic008G135701 Sobic008G135701 Sobic001G463500--Sobic008G135701 Sobic002G330500 Sobic002G330500 Sobic001G463500--Sobic002G330500 Sobic001G463500--Sobic001G008700 Sobic001G463500--Sobic003G420900 Sobic001G543700 Sobic001G543700 Sobic001G463500--Sobic001G543700 Sobic001G463500--Sobic001G011300 Sobic002G253100 Sobic002G253100 Sobic001G463500--Sobic002G253100 Sobic002G333100 Sobic002G333100 Sobic001G463500--Sobic002G333100 Sobic001G376700 Sobic001G376700 Sobic003G420900--Sobic001G376700 Sobic003G420900--Sobic004G296800 Sobic003G165800 Sobic003G165800 Sobic003G420900--Sobic003G165800 Sobic009G231100 Sobic009G231100 Sobic003G420900--Sobic009G231100 Sobic003G420900--Sobic002G333100 Sobic004G275600 Sobic004G275600 Sobic003G420900--Sobic004G275600 Sobic010G134500 Sobic010G134500 Sobic003G420900--Sobic010G134500 Sobic003G420900--Sobic003G261200 Sobic003G420900--Sobic001G543700 Sobic001G008700--Sobic001G463500 Sobic001G008700--Sobic010G221600 Sobic001G008700--Sobic001G011300 Sobic001G175600 Sobic001G175600 Sobic001G008700--Sobic001G175600 Sobic007G102700 Sobic007G102700 Sobic001G008700--Sobic007G102700 Sobic004G023900 Sobic004G023900 Sobic001G008700--Sobic004G023900 Sobic005G046900 Sobic005G046900 Sobic001G008700--Sobic005G046900 Sobic010G108900 Sobic010G108900 Sobic001G008700--Sobic010G108900 Sobic006G168400 Sobic006G168400 Sobic001G008700--Sobic006G168400 Sobic004G234200 Sobic004G234200 Sobic004G068300--Sobic004G234200 Sobic001G041800 Sobic001G041800 Sobic004G068300--Sobic001G041800 Sobic002G030200 Sobic002G030200 Sobic004G068300--Sobic002G030200 Sobic001G531200 Sobic001G531200 Sobic004G068300--Sobic001G531200 Sobic008G117400 Sobic008G117400 Sobic004G068300--Sobic008G117400 Sobic003G030900 Sobic003G030900 Sobic004G068300--Sobic003G030900 Sobic006G222700 Sobic006G222700 Sobic004G068300--Sobic006G222700 Sobic010G022100 Sobic010G022100 Sobic004G068300--Sobic010G022100 Sobic001G206200 Sobic001G206200 Sobic004G068300--Sobic001G206200 Sobic006G263800 Sobic006G263800 Sobic004G015700--Sobic006G263800 Sobic004G015700--Sobic003G383500 Sobic009G083300 Sobic009G083300 Sobic004G015700--Sobic009G083300 Sobic004G015700--Sobic007G013400 Sobic001G099000 Sobic001G099000 Sobic004G015700--Sobic001G099000 Sobic001G236800 Sobic001G236800 Sobic004G015700--Sobic001G236800 Sobic002G190100 Sobic002G190100 Sobic004G015700--Sobic002G190100 Sobic009G212000 Sobic009G212000 Sobic004G015700--Sobic009G212000 Sobic004G015700--Sobic003G261200
Octagon: transcription factors


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