Gene annotation
Transcriptome id Sobic.010G091200.3,Sobic.010G091200.4
Synonym Sb10g007930
Functional annotation mTERF family protein, expressed
UniProt A0A1W0VS55 , A0A194YJ54
Pfam PF02536
Panther DB PTHR13068 PTHR13068:SF37
NCBI CDD KOG1267; Mitochondrial transcription termination factor, mTERF
KEGG Orthology K15032; mTERF domain-containing protein, mitochondrial
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding


Orthologs (automatic annotation)
TAIR AT5G07900 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os06g12100.1 : mTERF family protein, expressed
MaizeGDB (Corn) Zm00025a014949 , Zm00025a019332
Brachypodium -
Barley HORVU5Hr1G069340.1 , HORVU5Hr1G069340.2
Wheat TraesCS2B02G093600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
2 Sobic.004G040600 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
3 Sobic.002G065200 pentatricopeptide, putative, expressed -
4 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
5 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.003G439000 rubredoxin family protein, putative, expressed -
7 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
8 Sobic.001G514100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.006G256600 expressed protein -
10 Sobic.003G014000 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase, putative, expressed -
11 Sobic.002G081500 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
12 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
13 Sobic.001G099000 expressed protein -
14 Sobic.004G068300 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
15 Sobic.003G114100 expressed protein -
16 Sobic.002G013700 PPR2, putative, expressed -
17 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
18 Sobic.001G003900 pentatricopeptide, putative, expressed -
19 Sobic.001G041800 -(PubMedID : 29017446)@magnesium-chelatase subunit chlD, chloroplast precursor, putative, expressed K03404: chlD, magnesium chelatase subunit D
20 Sobic.007G101300 expressed protein -


Gene co-expression network
sample Sobic010G091200 Sobic010G091200 Sobic005G184300 Sobic005G184300 Sobic010G091200--Sobic005G184300 Sobic004G040600 Sobic004G040600 Sobic010G091200--Sobic004G040600 Sobic002G065200 Sobic002G065200 Sobic010G091200--Sobic002G065200 Sobic003G128400 Sobic003G128400 Sobic010G091200--Sobic003G128400 Sobic002G297400 Sobic002G297400 Sobic010G091200--Sobic002G297400 Sobic003G439000 Sobic003G439000 Sobic010G091200--Sobic003G439000 Sobic003G265500 Sobic003G265500 Sobic010G091200--Sobic003G265500 Sobic001G514100 Sobic001G514100 Sobic010G091200--Sobic001G514100 Sobic006G256600 Sobic006G256600 Sobic010G091200--Sobic006G256600 Sobic001G099000 Sobic001G099000 Sobic005G184300--Sobic001G099000 Sobic007G101300 Sobic007G101300 Sobic005G184300--Sobic007G101300 Sobic005G184300--Sobic003G128400 Sobic002G158800 Sobic002G158800 Sobic005G184300--Sobic002G158800 Sobic001G003900 Sobic001G003900 Sobic005G184300--Sobic001G003900 Sobic005G184300--Sobic002G297400 Sobic002G081500 Sobic002G081500 Sobic005G184300--Sobic002G081500 Sobic006G055800 Sobic006G055800 Sobic005G184300--Sobic006G055800 Sobic005G110481 Sobic005G110481 Sobic005G184300--Sobic005G110481 Sobic006G047300 Sobic006G047300 Sobic004G040600--Sobic006G047300 Sobic004G040600--Sobic001G099000 Sobic004G040600--Sobic002G081500 Sobic004G040600--Sobic003G439000 Sobic003G386300 Sobic003G386300 Sobic004G040600--Sobic003G386300 Sobic001G495300 Sobic001G495300 Sobic004G040600--Sobic001G495300 Sobic001G489800 Sobic001G489800 Sobic004G040600--Sobic001G489800 Sobic001G168800 Sobic001G168800 Sobic004G040600--Sobic001G168800 Sobic002G109000 Sobic002G109000 Sobic004G040600--Sobic002G109000 Sobic002G198600 Sobic002G198600 Sobic002G065200--Sobic002G198600 Sobic008G063500 Sobic008G063500 Sobic002G065200--Sobic008G063500 Sobic010G011800 Sobic010G011800 Sobic002G065200--Sobic010G011800 Sobic004G175500 Sobic004G175500 Sobic002G065200--Sobic004G175500 Sobic004G227200 Sobic004G227200 Sobic002G065200--Sobic004G227200 Sobic001G029100 Sobic001G029100 Sobic002G065200--Sobic001G029100 Sobic002G316700 Sobic002G316700 Sobic002G065200--Sobic002G316700 Sobic001G177000 Sobic001G177000 Sobic002G065200--Sobic001G177000 Sobic002G288300 Sobic002G288300 Sobic002G065200--Sobic002G288300 Sobic001G375000 Sobic001G375000 Sobic003G128400--Sobic001G375000 Sobic003G128400--Sobic007G101300 Sobic003G045300 Sobic003G045300 Sobic003G128400--Sobic003G045300 Sobic003G128400--Sobic005G184300 Sobic004G003900 Sobic004G003900 Sobic003G128400--Sobic004G003900 Sobic003G128400--Sobic006G055800 Sobic002G156100 Sobic002G156100 Sobic003G128400--Sobic002G156100 Sobic003G128400--Sobic002G297400 Sobic010G255100 Sobic010G255100 Sobic003G128400--Sobic010G255100 Sobic004G179200 Sobic004G179200 Sobic002G297400--Sobic004G179200 Sobic002G297400--Sobic006G055800 Sobic001G469933 Sobic001G469933 Sobic002G297400--Sobic001G469933 Sobic002G297400--Sobic006G256600 Sobic001G122400 Sobic001G122400 Sobic002G297400--Sobic001G122400 Sobic002G297400--Sobic005G184300 Sobic003G324700 Sobic003G324700 Sobic002G297400--Sobic003G324700 Sobic002G297400--Sobic003G439000 Sobic006G107600 Sobic006G107600 Sobic002G297400--Sobic006G107600 Sobic001G469900 Sobic001G469900 Sobic003G439000--Sobic001G469900 Sobic003G439000--Sobic001G469933 Sobic003G439000--Sobic001G168800 Sobic003G439000--Sobic004G179200 Sobic003G439000--Sobic001G122400 Sobic009G055800 Sobic009G055800 Sobic003G439000--Sobic009G055800 Sobic001G368500 Sobic001G368500 Sobic003G439000--Sobic001G368500 Sobic003G439000--Sobic002G297400 Sobic001G455500 Sobic001G455500 Sobic003G439000--Sobic001G455500 Sobic003G225100 Sobic003G225100 Sobic003G265500--Sobic003G225100 Sobic003G265500--Sobic005G184300 Sobic003G085000 Sobic003G085000 Sobic003G265500--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic003G265500--Sobic001G424300 Sobic010G221600 Sobic010G221600 Sobic003G265500--Sobic010G221600 Sobic004G307400 Sobic004G307400 Sobic003G265500--Sobic004G307400 Sobic004G065300 Sobic004G065300 Sobic003G265500--Sobic004G065300 Sobic002G353300 Sobic002G353300 Sobic003G265500--Sobic002G353300 Sobic001G104800 Sobic001G104800 Sobic003G265500--Sobic001G104800 Sobic003G162800 Sobic003G162800 Sobic001G514100--Sobic003G162800 Sobic001G281500 Sobic001G281500 Sobic001G514100--Sobic001G281500 Sobic003G327200 Sobic003G327200 Sobic001G514100--Sobic003G327200 Sobic005G197300 Sobic005G197300 Sobic001G514100--Sobic005G197300 Sobic001G514100--Sobic001G375000 Sobic001G514100--Sobic003G128400 Sobic001G494500 Sobic001G494500 Sobic001G514100--Sobic001G494500 Sobic001G514100--Sobic002G297400 Sobic001G382800 Sobic001G382800 Sobic001G514100--Sobic001G382800 Sobic006G256600--Sobic010G255100 Sobic006G256600--Sobic003G085000 Sobic001G291900 Sobic001G291900 Sobic006G256600--Sobic001G291900 Sobic006G210400 Sobic006G210400 Sobic006G256600--Sobic006G210400 Sobic006G256600--Sobic002G297400 Sobic006G256600--Sobic006G055800 Sobic005G002900 Sobic005G002900 Sobic006G256600--Sobic005G002900 Sobic001G309300 Sobic001G309300 Sobic006G256600--Sobic001G309300 Sobic006G256600--Sobic004G065300
Octagon: transcription factors


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