Gene annotation
Transcriptome id Sobic.001G208700.2
Synonym TIC110, Sb01g018450, ATTIC110
Functional annotation ATTIC110/TIC110, putative, expressed
UniProt A0A1Z5S6M4
Pfam PF16940
Panther DB PTHR34935
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06950 : translocon at the inner envelope membrane of chloroplasts 110
RAP-DB (Rice) LOC_Os10g35010.1 : ATTIC110/TIC110, putative, expressed
MaizeGDB (Corn) Zm00025a006503
Brachypodium PNT67623 , PNT67622 , PNT72165 , KQJ97258
Barley HORVU1Hr1G043900.11 , HORVU1Hr1G043900.10 , HORVU1Hr1G043940.3 , HORVU1Hr1G043900.7 , HORVU1Hr1G043900.6 , HORVU1Hr1G043900.5 , HORVU1Hr1G043900.2 , HORVU1Hr1G043900.1 , HORVU1Hr1G043900.9 , HORVU1Hr1G043900.8 , HORVU1Hr1G043940.2 , HORVU1Hr1G043940.8 , HORVU1Hr1G043940.7 , HORVU1Hr1G043940.6 , HORVU1Hr1G043940.5 , HORVU1Hr1G043940.4 , HORVU1Hr1G043940.1
Wheat TraesCS1B02G182500 , TraesCS1B02G182500 , TraesCS1A02G165800 , TraesCS1A02G165700 , TraesCS1D02G174900 , TraesCS1D02G175000 , TraesCS1D02G175000 , TraesCS1A02G165700 , TraesCS1B02G182400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G088200 DnaK family protein, putative, expressed -
2 Sobic.006G056700 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
3 Sobic.009G085200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
4 Sobic.004G213800 expressed protein -
5 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
6 Sobic.001G058200 PPR repeat domain containing protein, putative, expressed -
7 Sobic.001G379200 tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
8 Sobic.004G137801 - -
9 Sobic.006G096900 expressed protein -
10 Sobic.001G275300 - K10899: ATP-dependent DNA helicase Q1
11 Sobic.004G079800 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
12 Sobic.005G167700 protein phosphatase 2C, putative, expressed -
13 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
14 Sobic.002G029100 GYF domain containing protein, putative, expressed -
15 Sobic.005G072100 preprotein translocase secA family protein, putative, expressed K03070: preprotein translocase subunit SecA
16 Sobic.002G411400 nucleolar GTP-binding protein 1, putative, expressed K06943: nucleolar GTP-binding protein
17 Sobic.001G022500 tRNA synthetases class II domain containing protein, expressed K04567: KARS, lysyl-tRNA synthetase, class II
18 Sobic.003G214600 transcriptional corepressor LEUNIG, putative, expressed -
19 Sobic.001G501800 ZOS1-20 - C2H2 zinc finger protein, expressed -
20 Sobic.004G129300 chromatin modification-related protein EAF3, putative, expressed K11339: MORF4L1, MRG15, mortality factor 4-like protein 1


Gene co-expression network
sample Sobic001G208700 Sobic001G208700 Sobic008G088200 Sobic008G088200 Sobic001G208700--Sobic008G088200 Sobic006G056700 Sobic006G056700 Sobic001G208700--Sobic006G056700 Sobic009G085200 Sobic009G085200 Sobic001G208700--Sobic009G085200 Sobic004G213800 Sobic004G213800 Sobic001G208700--Sobic004G213800 Sobic009G129100 Sobic009G129100 Sobic001G208700--Sobic009G129100 Sobic001G058200 Sobic001G058200 Sobic001G208700--Sobic001G058200 Sobic001G379200 Sobic001G379200 Sobic001G208700--Sobic001G379200 Sobic004G137801 Sobic004G137801 Sobic001G208700--Sobic004G137801 Sobic006G096900 Sobic006G096900 Sobic001G208700--Sobic006G096900 Sobic008G088200--Sobic001G208700 Sobic008G145800 Sobic008G145800 Sobic008G088200--Sobic008G145800 Sobic003G038100 Sobic003G038100 Sobic008G088200--Sobic003G038100 Sobic004G311400 Sobic004G311400 Sobic008G088200--Sobic004G311400 Sobic008G096000 Sobic008G096000 Sobic008G088200--Sobic008G096000 Sobic006G200500 Sobic006G200500 Sobic008G088200--Sobic006G200500 Sobic003G159500 Sobic003G159500 Sobic008G088200--Sobic003G159500 Sobic002G029100 Sobic002G029100 Sobic008G088200--Sobic002G029100 Sobic004G285400 Sobic004G285400 Sobic008G088200--Sobic004G285400 Sobic006G056700--Sobic006G096900 Sobic001G456300 Sobic001G456300 Sobic006G056700--Sobic001G456300 Sobic010G237900 Sobic010G237900 Sobic006G056700--Sobic010G237900 Sobic001G275300 Sobic001G275300 Sobic006G056700--Sobic001G275300 Sobic008G063300 Sobic008G063300 Sobic006G056700--Sobic008G063300 Sobic002G170200 Sobic002G170200 Sobic006G056700--Sobic002G170200 Sobic004G131800 Sobic004G131800 Sobic006G056700--Sobic004G131800 Sobic007G159900 Sobic007G159900 Sobic006G056700--Sobic007G159900 Sobic003G360400 Sobic003G360400 Sobic006G056700--Sobic003G360400 Sobic004G065300 Sobic004G065300 Sobic009G085200--Sobic004G065300 Sobic003G085000 Sobic003G085000 Sobic009G085200--Sobic003G085000 Sobic010G255100 Sobic010G255100 Sobic009G085200--Sobic010G255100 Sobic005G117300 Sobic005G117300 Sobic009G085200--Sobic005G117300 Sobic006G055800 Sobic006G055800 Sobic009G085200--Sobic006G055800 Sobic008G090900 Sobic008G090900 Sobic009G085200--Sobic008G090900 Sobic002G109000 Sobic002G109000 Sobic009G085200--Sobic002G109000 Sobic003G271900 Sobic003G271900 Sobic009G085200--Sobic003G271900 Sobic003G128400 Sobic003G128400 Sobic009G085200--Sobic003G128400 Sobic003G241700 Sobic003G241700 Sobic004G213800--Sobic003G241700 Sobic001G151100 Sobic001G151100 Sobic004G213800--Sobic001G151100 Sobic010G244900 Sobic010G244900 Sobic004G213800--Sobic010G244900 Sobic009G228000 Sobic009G228000 Sobic004G213800--Sobic009G228000 Sobic003G296900 Sobic003G296900 Sobic004G213800--Sobic003G296900 Sobic003G043000 Sobic003G043000 Sobic004G213800--Sobic003G043000 Sobic005G167700 Sobic005G167700 Sobic004G213800--Sobic005G167700 Sobic004G213800--Sobic001G275300 Sobic007G000300 Sobic007G000300 Sobic004G213800--Sobic007G000300 Sobic003G168100 Sobic003G168100 Sobic009G129100--Sobic003G168100 Sobic009G129100--Sobic005G167700 Sobic003G067100 Sobic003G067100 Sobic009G129100--Sobic003G067100 Sobic010G126000 Sobic010G126000 Sobic009G129100--Sobic010G126000 Sobic003G234900 Sobic003G234900 Sobic009G129100--Sobic003G234900 Sobic003G120300 Sobic003G120300 Sobic009G129100--Sobic003G120300 Sobic009G129100--Sobic001G275300 Sobic004G185800 Sobic004G185800 Sobic009G129100--Sobic004G185800 Sobic009G132700 Sobic009G132700 Sobic009G129100--Sobic009G132700 Sobic001G058200--Sobic001G151100 Sobic005G162500 Sobic005G162500 Sobic001G058200--Sobic005G162500 Sobic001G542400 Sobic001G542400 Sobic001G058200--Sobic001G542400 Sobic002G133300 Sobic002G133300 Sobic001G058200--Sobic002G133300 Sobic008G082500 Sobic008G082500 Sobic001G058200--Sobic008G082500 Sobic004G131300 Sobic004G131300 Sobic001G058200--Sobic004G131300 Sobic004G248600 Sobic004G248600 Sobic001G058200--Sobic004G248600 Sobic003G214600 Sobic003G214600 Sobic001G058200--Sobic003G214600 Sobic001G087600 Sobic001G087600 Sobic001G058200--Sobic001G087600 Sobic001G326300 Sobic001G326300 Sobic001G379200--Sobic001G326300 Sobic001G022500 Sobic001G022500 Sobic001G379200--Sobic001G022500 Sobic001G246500 Sobic001G246500 Sobic001G379200--Sobic001G246500 Sobic007G225000 Sobic007G225000 Sobic001G379200--Sobic007G225000 Sobic004G263200 Sobic004G263200 Sobic001G379200--Sobic004G263200 Sobic001G379200--Sobic001G208700 Sobic004G333700 Sobic004G333700 Sobic001G379200--Sobic004G333700 Sobic004G225600 Sobic004G225600 Sobic001G379200--Sobic004G225600 Sobic008G092532 Sobic008G092532 Sobic001G379200--Sobic008G092532 Sobic004G137801--Sobic006G096900 Sobic004G137801--Sobic003G234900 Sobic004G137801--Sobic003G120300 Sobic004G137801--Sobic009G129100 Sobic002G343400 Sobic002G343400 Sobic004G137801--Sobic002G343400 Sobic001G455600 Sobic001G455600 Sobic004G137801--Sobic001G455600 Sobic004G137801--Sobic006G056700 Sobic002G296100 Sobic002G296100 Sobic004G137801--Sobic002G296100 Sobic004G140600 Sobic004G140600 Sobic004G137801--Sobic004G140600 Sobic006G096900--Sobic008G063300 Sobic009G177500 Sobic009G177500 Sobic006G096900--Sobic009G177500 Sobic006G252900 Sobic006G252900 Sobic006G096900--Sobic006G252900 Sobic006G096900--Sobic003G360400 Sobic003G095900 Sobic003G095900 Sobic006G096900--Sobic003G095900 Sobic006G096900--Sobic006G056700 Sobic001G433800 Sobic001G433800 Sobic006G096900--Sobic001G433800 Sobic001G384300 Sobic001G384300 Sobic006G096900--Sobic001G384300 Sobic009G044800 Sobic009G044800 Sobic006G096900--Sobic009G044800
Octagon: transcription factors


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