Gene annotation
Transcriptome id Sobic.003G190500.1
Synonym IAR3, JR3, Sb03g025480
Functional annotation hydrolase, putative, expressed
UniProt A0A1W0VY11
Pfam PF07687 PF01546
Panther DB PTHR11014 PTHR11014:SF55
NCBI CDD -
KEGG Orthology K14664; IAA-amino acid hydrolase
Gene Ontology GO:0016787; hydrolase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G51760 : peptidase M20/M25/M40 family protein
RAP-DB (Rice) LOC_Os01g37960.1 : hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a028412
Brachypodium KQK08346 , KQK08345
Barley HORVU3Hr1G048560.4 , HORVU3Hr1G048560.5 , HORVU3Hr1G048560.2 , HORVU3Hr1G048560.3 , HORVU3Hr1G048560.1
Wheat TraesCS3B02G232800 , TraesCS3B02G232800 , TraesCS3A02G204400 , TraesCS3D02G207700 , TraesCS3D02G207700 , TraesCS3D02G207700
Populus -


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cDNA sequences
Sobic.003G190500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
2 Sobic.004G023900 3-isopropylmalate dehydratase large subunit 2, putative, expressed K01703: leuC, 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
3 Sobic.007G171950 - -
4 Sobic.004G018000 bifunctional protein folD, putative, expressed -
5 Sobic.009G108500 acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
6 Sobic.002G242200 expressed protein -
7 Sobic.003G279200 ubiquinone oxidoreductase, putative, expressed K03940: NADH dehydrogenase (ubiquinone) Fe-S protein 7
8 Sobic.001G296900 dual specificity protein phosphatase, putative, expressed -
9 Sobic.006G168400 ethylene-responsive element-binding protein, putative, expressed -
10 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
11 Sobic.001G218800 expressed protein -
12 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
13 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
14 Sobic.010G092300 N-rich protein, putative, expressed -
15 Sobic.002G244500 ATP phosphoribosyltransferase, putative, expressed K00765: ATP phosphoribosyltransferase
16 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
17 Sobic.010G024100 tRNA 2-phosphotransferase 1, putative, expressed K10669: TRPT1, 2'-phosphotransferase
18 Sobic.002G390300 heat shock protein DnaJ, putative, expressed -
19 Sobic.002G333100 transmembrane protein, putative, expressed -
20 Sobic.003G121300 expressed protein K15170: mediator of RNA polymerase II transcription subunit 27


Gene co-expression network
sample Sobic003G190500 Sobic003G190500 Sobic010G108900 Sobic010G108900 Sobic003G190500--Sobic010G108900 Sobic004G023900 Sobic004G023900 Sobic003G190500--Sobic004G023900 Sobic007G171950 Sobic007G171950 Sobic003G190500--Sobic007G171950 Sobic004G018000 Sobic004G018000 Sobic003G190500--Sobic004G018000 Sobic009G108500 Sobic009G108500 Sobic003G190500--Sobic009G108500 Sobic002G242200 Sobic002G242200 Sobic003G190500--Sobic002G242200 Sobic003G279200 Sobic003G279200 Sobic003G190500--Sobic003G279200 Sobic001G296900 Sobic001G296900 Sobic003G190500--Sobic001G296900 Sobic006G168400 Sobic006G168400 Sobic003G190500--Sobic006G168400 Sobic001G380500 Sobic001G380500 Sobic010G108900--Sobic001G380500 Sobic001G218800 Sobic001G218800 Sobic010G108900--Sobic001G218800 Sobic010G108900--Sobic006G168400 Sobic003G004700 Sobic003G004700 Sobic010G108900--Sobic003G004700 Sobic006G183000 Sobic006G183000 Sobic010G108900--Sobic006G183000 Sobic001G469200 Sobic001G469200 Sobic010G108900--Sobic001G469200 Sobic002G262000 Sobic002G262000 Sobic010G108900--Sobic002G262000 Sobic010G108900--Sobic009G108500 Sobic006G109700 Sobic006G109700 Sobic010G108900--Sobic006G109700 Sobic004G023900--Sobic003G190500 Sobic001G039500 Sobic001G039500 Sobic004G023900--Sobic001G039500 Sobic009G127300 Sobic009G127300 Sobic004G023900--Sobic009G127300 Sobic006G245100 Sobic006G245100 Sobic004G023900--Sobic006G245100 Sobic004G023900--Sobic004G018000 Sobic003G159500 Sobic003G159500 Sobic004G023900--Sobic003G159500 Sobic002G390300 Sobic002G390300 Sobic004G023900--Sobic002G390300 Sobic001G008700 Sobic001G008700 Sobic004G023900--Sobic001G008700 Sobic002G119400 Sobic002G119400 Sobic004G023900--Sobic002G119400 Sobic008G067100 Sobic008G067100 Sobic007G171950--Sobic008G067100 Sobic001G096300 Sobic001G096300 Sobic007G171950--Sobic001G096300 Sobic007G095500 Sobic007G095500 Sobic007G171950--Sobic007G095500 Sobic002G122600 Sobic002G122600 Sobic007G171950--Sobic002G122600 Sobic001G296400 Sobic001G296400 Sobic007G171950--Sobic001G296400 Sobic007G171950--Sobic010G108900 Sobic009G207100 Sobic009G207100 Sobic007G171950--Sobic009G207100 Sobic001G263000 Sobic001G263000 Sobic007G171950--Sobic001G263000 Sobic003G265500 Sobic003G265500 Sobic007G171950--Sobic003G265500 Sobic001G178300 Sobic001G178300 Sobic004G018000--Sobic001G178300 Sobic008G116000 Sobic008G116000 Sobic004G018000--Sobic008G116000 Sobic001G537500 Sobic001G537500 Sobic004G018000--Sobic001G537500 Sobic001G486700 Sobic001G486700 Sobic004G018000--Sobic001G486700 Sobic001G003100 Sobic001G003100 Sobic004G018000--Sobic001G003100 Sobic004G344000 Sobic004G344000 Sobic004G018000--Sobic004G344000 Sobic001G462200 Sobic001G462200 Sobic004G018000--Sobic001G462200 Sobic002G393700 Sobic002G393700 Sobic004G018000--Sobic002G393700 Sobic001G116500 Sobic001G116500 Sobic004G018000--Sobic001G116500 Sobic009G108500--Sobic006G183000 Sobic006G087100 Sobic006G087100 Sobic009G108500--Sobic006G087100 Sobic001G532100 Sobic001G532100 Sobic009G108500--Sobic001G532100 Sobic001G189600 Sobic001G189600 Sobic009G108500--Sobic001G189600 Sobic001G294900 Sobic001G294900 Sobic009G108500--Sobic001G294900 Sobic009G108500--Sobic006G109700 Sobic009G108500--Sobic010G108900 Sobic006G225300 Sobic006G225300 Sobic009G108500--Sobic006G225300 Sobic006G203100 Sobic006G203100 Sobic009G108500--Sobic006G203100 Sobic007G097900 Sobic007G097900 Sobic002G242200--Sobic007G097900 Sobic005G160400 Sobic005G160400 Sobic002G242200--Sobic005G160400 Sobic003G127300 Sobic003G127300 Sobic002G242200--Sobic003G127300 Sobic003G299000 Sobic003G299000 Sobic002G242200--Sobic003G299000 Sobic010G092300 Sobic010G092300 Sobic002G242200--Sobic010G092300 Sobic001G207500 Sobic001G207500 Sobic002G242200--Sobic001G207500 Sobic010G265300 Sobic010G265300 Sobic002G242200--Sobic010G265300 Sobic004G318000 Sobic004G318000 Sobic002G242200--Sobic004G318000 Sobic002G009200 Sobic002G009200 Sobic002G242200--Sobic002G009200 Sobic003G216500 Sobic003G216500 Sobic003G279200--Sobic003G216500 Sobic003G279200--Sobic001G116500 Sobic002G410700 Sobic002G410700 Sobic003G279200--Sobic002G410700 Sobic006G237200 Sobic006G237200 Sobic003G279200--Sobic006G237200 Sobic006G178000 Sobic006G178000 Sobic003G279200--Sobic006G178000 Sobic003G279200--Sobic003G190500 Sobic002G396700 Sobic002G396700 Sobic003G279200--Sobic002G396700 Sobic006G020900 Sobic006G020900 Sobic003G279200--Sobic006G020900 Sobic006G276700 Sobic006G276700 Sobic003G279200--Sobic006G276700 Sobic003G053800 Sobic003G053800 Sobic001G296900--Sobic003G053800 Sobic009G243100 Sobic009G243100 Sobic001G296900--Sobic009G243100 Sobic010G020300 Sobic010G020300 Sobic001G296900--Sobic010G020300 Sobic001G296900--Sobic005G160400 Sobic002G105200 Sobic002G105200 Sobic001G296900--Sobic002G105200 Sobic003G422900 Sobic003G422900 Sobic001G296900--Sobic003G422900 Sobic001G395400 Sobic001G395400 Sobic001G296900--Sobic001G395400 Sobic007G166100 Sobic007G166100 Sobic001G296900--Sobic007G166100 Sobic003G436300 Sobic003G436300 Sobic001G296900--Sobic003G436300 Sobic006G168400--Sobic010G108900 Sobic006G168400--Sobic001G380500 Sobic006G168400--Sobic002G262000 Sobic002G333100 Sobic002G333100 Sobic006G168400--Sobic002G333100 Sobic006G168400--Sobic003G004700 Sobic006G168400--Sobic006G183000 Sobic001G463500 Sobic001G463500 Sobic006G168400--Sobic001G463500 Sobic006G168400--Sobic006G109700 Sobic006G168400--Sobic001G218800
Octagon: transcription factors


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