Gene annotation
Transcriptome id Sobic.003G279200.1
Synonym Sb03g033090
Functional annotation ubiquinone oxidoreductase, putative, expressed
UniProt C5XIC9
Pfam PF01058
Panther DB PTHR11995 PTHR11995:SF19
NCBI CDD KOG1687; NADH-ubiquinone oxidoreductase, NUFS7/PSST/20 kDa subunit
KEGG Orthology K03940; NADH dehydrogenase (ubiquinone) Fe-S protein 7
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11770 : NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial
RAP-DB (Rice) LOC_Os01g52214.1 : ubiquinone oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a038982 , Zm00025a027766
Brachypodium KQK09512 , KQK05223
Barley HORVU3Hr1G068360.2 , HORVU3Hr1G068360.8 , HORVU3Hr1G068360.9 , HORVU3Hr1G068360.3 , HORVU3Hr1G068360.1 , HORVU3Hr1G068360.4
Wheat TraesCS3D02G287400 , TraesCS3B02G322300 , TraesCS1D02G357100 , TraesCS3A02G287600 , TraesCS1B02G368900 , TraesCS1B02G368900 , TraesCS1A02G353000
Populus -


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cDNA sequences
Sobic.003G279200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
2 Sobic.001G116500 phosphoglucomutase, putative, expressed K01835: phosphoglucomutase
3 Sobic.002G410700 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
4 Sobic.006G237200 vacuolar ATP synthase subunit D 1, putative, expressed K02149: ATPeV1D, V-type H+-transporting ATPase subunit D
5 Sobic.006G178000 coiled-coil domain-containing protein 124, putative, expressed -
6 Sobic.003G190500 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
7 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
8 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -
9 Sobic.006G276700 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
10 Sobic.001G447600 squalene monooxygenase, putative, expressed K00511: SQLE, squalene monooxygenase
11 Sobic.004G297700 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
12 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
13 Sobic.009G240700 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
14 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
15 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
16 Sobic.001G388600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
17 Sobic.006G002201 - -
18 Sobic.005G018800 expressed protein -
19 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
20 Sobic.010G026925 - K01689: ENO, enolase


Gene co-expression network
sample Sobic003G279200 Sobic003G279200 Sobic003G216500 Sobic003G216500 Sobic003G279200--Sobic003G216500 Sobic001G116500 Sobic001G116500 Sobic003G279200--Sobic001G116500 Sobic002G410700 Sobic002G410700 Sobic003G279200--Sobic002G410700 Sobic006G237200 Sobic006G237200 Sobic003G279200--Sobic006G237200 Sobic006G178000 Sobic006G178000 Sobic003G279200--Sobic006G178000 Sobic003G190500 Sobic003G190500 Sobic003G279200--Sobic003G190500 Sobic002G396700 Sobic002G396700 Sobic003G279200--Sobic002G396700 Sobic006G020900 Sobic006G020900 Sobic003G279200--Sobic006G020900 Sobic006G276700 Sobic006G276700 Sobic003G279200--Sobic006G276700 Sobic003G216500--Sobic002G410700 Sobic004G182500 Sobic004G182500 Sobic003G216500--Sobic004G182500 Sobic009G240700 Sobic009G240700 Sobic003G216500--Sobic009G240700 Sobic001G473400 Sobic001G473400 Sobic003G216500--Sobic001G473400 Sobic003G170300 Sobic003G170300 Sobic003G216500--Sobic003G170300 Sobic002G073800 Sobic002G073800 Sobic003G216500--Sobic002G073800 Sobic003G216500--Sobic003G279200 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700 Sobic004G094700 Sobic004G094700 Sobic001G116500--Sobic004G094700 Sobic001G537100 Sobic001G537100 Sobic001G116500--Sobic001G537100 Sobic005G111700 Sobic005G111700 Sobic001G116500--Sobic005G111700 Sobic006G039400 Sobic006G039400 Sobic001G116500--Sobic006G039400 Sobic001G178100 Sobic001G178100 Sobic001G116500--Sobic001G178100 Sobic001G116500--Sobic003G279200 Sobic004G018000 Sobic004G018000 Sobic001G116500--Sobic004G018000 Sobic001G435400 Sobic001G435400 Sobic001G116500--Sobic001G435400 Sobic001G462200 Sobic001G462200 Sobic001G116500--Sobic001G462200 Sobic002G410700--Sobic003G216500 Sobic002G410700--Sobic006G237200 Sobic009G256000 Sobic009G256000 Sobic002G410700--Sobic009G256000 Sobic008G150300 Sobic008G150300 Sobic002G410700--Sobic008G150300 Sobic002G410700--Sobic001G473400 Sobic002G410700--Sobic006G020900 Sobic002G410700--Sobic009G240700 Sobic007G161200 Sobic007G161200 Sobic002G410700--Sobic007G161200 Sobic002G410700--Sobic003G170300 Sobic006G237200--Sobic002G410700 Sobic006G237200--Sobic009G256000 Sobic008G021200 Sobic008G021200 Sobic006G237200--Sobic008G021200 Sobic006G237200--Sobic007G161200 Sobic006G237200--Sobic003G216500 Sobic002G186300 Sobic002G186300 Sobic006G237200--Sobic002G186300 Sobic006G237200--Sobic006G020900 Sobic005G018800 Sobic005G018800 Sobic006G237200--Sobic005G018800 Sobic001G110300 Sobic001G110300 Sobic006G237200--Sobic001G110300 Sobic003G369500 Sobic003G369500 Sobic006G178000--Sobic003G369500 Sobic010G267500 Sobic010G267500 Sobic006G178000--Sobic010G267500 Sobic007G137600 Sobic007G137600 Sobic006G178000--Sobic007G137600 Sobic006G178000--Sobic003G279200 Sobic010G026925 Sobic010G026925 Sobic006G178000--Sobic010G026925 Sobic003G402600 Sobic003G402600 Sobic006G178000--Sobic003G402600 Sobic004G057200 Sobic004G057200 Sobic006G178000--Sobic004G057200 Sobic001G082000 Sobic001G082000 Sobic006G178000--Sobic001G082000 Sobic003G308400 Sobic003G308400 Sobic006G178000--Sobic003G308400 Sobic010G108900 Sobic010G108900 Sobic003G190500--Sobic010G108900 Sobic004G023900 Sobic004G023900 Sobic003G190500--Sobic004G023900 Sobic007G171950 Sobic007G171950 Sobic003G190500--Sobic007G171950 Sobic003G190500--Sobic004G018000 Sobic009G108500 Sobic009G108500 Sobic003G190500--Sobic009G108500 Sobic002G242200 Sobic002G242200 Sobic003G190500--Sobic002G242200 Sobic003G190500--Sobic003G279200 Sobic001G296900 Sobic001G296900 Sobic003G190500--Sobic001G296900 Sobic006G168400 Sobic006G168400 Sobic003G190500--Sobic006G168400 Sobic004G344800 Sobic004G344800 Sobic002G396700--Sobic004G344800 Sobic009G191400 Sobic009G191400 Sobic002G396700--Sobic009G191400 Sobic007G171500 Sobic007G171500 Sobic002G396700--Sobic007G171500 Sobic001G112400 Sobic001G112400 Sobic002G396700--Sobic001G112400 Sobic001G115700 Sobic001G115700 Sobic002G396700--Sobic001G115700 Sobic009G089700 Sobic009G089700 Sobic002G396700--Sobic009G089700 Sobic001G458800 Sobic001G458800 Sobic002G396700--Sobic001G458800 Sobic002G262200 Sobic002G262200 Sobic002G396700--Sobic002G262200 Sobic001G465400 Sobic001G465400 Sobic002G396700--Sobic001G465400 Sobic006G020900--Sobic001G473400 Sobic006G020900--Sobic002G410700 Sobic003G388700 Sobic003G388700 Sobic006G020900--Sobic003G388700 Sobic005G105500 Sobic005G105500 Sobic006G020900--Sobic005G105500 Sobic004G291400 Sobic004G291400 Sobic006G020900--Sobic004G291400 Sobic001G304000 Sobic001G304000 Sobic006G020900--Sobic001G304000 Sobic006G020900--Sobic009G256000 Sobic003G392600 Sobic003G392600 Sobic006G020900--Sobic003G392600 Sobic006G020900--Sobic009G240700 Sobic004G297700 Sobic004G297700 Sobic006G276700--Sobic004G297700 Sobic001G282500 Sobic001G282500 Sobic006G276700--Sobic001G282500 Sobic010G032600 Sobic010G032600 Sobic006G276700--Sobic010G032600 Sobic001G073600 Sobic001G073600 Sobic006G276700--Sobic001G073600 Sobic002G395000 Sobic002G395000 Sobic006G276700--Sobic002G395000 Sobic003G135600 Sobic003G135600 Sobic006G276700--Sobic003G135600 Sobic004G202100 Sobic004G202100 Sobic006G276700--Sobic004G202100 Sobic007G023400 Sobic007G023400 Sobic006G276700--Sobic007G023400 Sobic006G276700--Sobic007G171500
Octagon: transcription factors


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