Gene annotation
Transcriptome id Sobic.001G388600.1
Synonym Sb01g036830, HINT1, HIT3
Functional annotation histidine triad family protein, putative, expressed
UniProt C5X1S5
Pfam PF11969
Panther DB PTHR23089 PTHR23089:SF12
NCBI CDD KOG3275; Zinc-binding protein of the histidine triad (HIT) family
KEGG Orthology K02503; HINT1, hinT, histidine triad (HIT) family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56490 : HIS triad family protein 3
RAP-DB (Rice) LOC_Os03g20630.2 : histidine triad family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002251
Brachypodium KQK21906
Barley HORVU4Hr1G051830.1 , HORVU4Hr1G051830.2 , HORVU4Hr1G051830.3
Wheat TraesCS4B02G176200 , TraesCS4A02G128600 , TraesCS4D02G178000
Populus -


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cDNA sequences
Sobic.001G388600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G478000 CutA, chloroplast precursor, putative, expressed K03926: periplasmic divalent cation tolerance protein
2 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
3 Sobic.004G327300 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
4 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
5 Sobic.002G371100 40S ribosomal protein S3-1, putative, expressed K02985: RP-S3e, small subunit ribosomal protein S3e
6 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -
7 Sobic.004G099900 early nodulin 93 ENOD93 protein, putative, expressed -
8 Sobic.007G152400 eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
9 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
10 Sobic.007G096700 POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
11 Sobic.010G114700 heat shock factor-binding protein 1, putative, expressed -
12 Sobic.006G211800 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
13 Sobic.001G501200 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
14 Sobic.009G240900 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
15 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
16 Sobic.001G481700 eukaryotic translation initiation factor 3 subunit K, putative, expressed K15028: translation initiation factor 3 subunit K
17 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
18 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
19 Sobic.010G103900 ribosomal protein L51, putative, expressed K17424: large subunit ribosomal protein L43
20 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1


Gene co-expression network
sample Sobic001G388600 Sobic001G388600 Sobic001G478000 Sobic001G478000 Sobic001G388600--Sobic001G478000 Sobic004G130100 Sobic004G130100 Sobic001G388600--Sobic004G130100 Sobic004G327300 Sobic004G327300 Sobic001G388600--Sobic004G327300 Sobic002G363100 Sobic002G363100 Sobic001G388600--Sobic002G363100 Sobic002G371100 Sobic002G371100 Sobic001G388600--Sobic002G371100 Sobic001G005900 Sobic001G005900 Sobic001G388600--Sobic001G005900 Sobic004G099900 Sobic004G099900 Sobic001G388600--Sobic004G099900 Sobic007G152400 Sobic007G152400 Sobic001G388600--Sobic007G152400 Sobic003G216500 Sobic003G216500 Sobic001G388600--Sobic003G216500 Sobic009G240900 Sobic009G240900 Sobic001G478000--Sobic009G240900 Sobic009G144300 Sobic009G144300 Sobic001G478000--Sobic009G144300 Sobic001G478000--Sobic001G388600 Sobic007G076300 Sobic007G076300 Sobic001G478000--Sobic007G076300 Sobic002G255100 Sobic002G255100 Sobic001G478000--Sobic002G255100 Sobic004G138800 Sobic004G138800 Sobic001G478000--Sobic004G138800 Sobic004G216800 Sobic004G216800 Sobic001G478000--Sobic004G216800 Sobic001G096100 Sobic001G096100 Sobic001G478000--Sobic001G096100 Sobic009G227400 Sobic009G227400 Sobic001G478000--Sobic009G227400 Sobic009G217900 Sobic009G217900 Sobic004G130100--Sobic009G217900 Sobic006G232200 Sobic006G232200 Sobic004G130100--Sobic006G232200 Sobic001G501200 Sobic001G501200 Sobic004G130100--Sobic001G501200 Sobic003G337000 Sobic003G337000 Sobic004G130100--Sobic003G337000 Sobic004G130100--Sobic002G363100 Sobic003G124800 Sobic003G124800 Sobic004G130100--Sobic003G124800 Sobic009G198500 Sobic009G198500 Sobic004G130100--Sobic009G198500 Sobic002G428200 Sobic002G428200 Sobic004G130100--Sobic002G428200 Sobic001G428100 Sobic001G428100 Sobic004G130100--Sobic001G428100 Sobic003G367451 Sobic003G367451 Sobic004G327300--Sobic003G367451 Sobic004G327300--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic004G327300--Sobic007G096700 Sobic002G400000 Sobic002G400000 Sobic004G327300--Sobic002G400000 Sobic004G130900 Sobic004G130900 Sobic004G327300--Sobic004G130900 Sobic001G461900 Sobic001G461900 Sobic004G327300--Sobic001G461900 Sobic009G174900 Sobic009G174900 Sobic004G327300--Sobic009G174900 Sobic004G327300--Sobic009G198500 Sobic007G114200 Sobic007G114200 Sobic004G327300--Sobic007G114200 Sobic002G363100--Sobic009G240900 Sobic001G040800 Sobic001G040800 Sobic002G363100--Sobic001G040800 Sobic009G001400 Sobic009G001400 Sobic002G363100--Sobic009G001400 Sobic001G357300 Sobic001G357300 Sobic002G363100--Sobic001G357300 Sobic002G363100--Sobic007G114200 Sobic002G363100--Sobic009G217900 Sobic002G363100--Sobic001G005900 Sobic002G363100--Sobic004G130100 Sobic002G363100--Sobic004G327300 Sobic001G018800 Sobic001G018800 Sobic002G371100--Sobic001G018800 Sobic008G073300 Sobic008G073300 Sobic002G371100--Sobic008G073300 Sobic001G025600 Sobic001G025600 Sobic002G371100--Sobic001G025600 Sobic002G371100--Sobic002G255100 Sobic002G049300 Sobic002G049300 Sobic002G371100--Sobic002G049300 Sobic004G103700 Sobic004G103700 Sobic002G371100--Sobic004G103700 Sobic003G308000 Sobic003G308000 Sobic002G371100--Sobic003G308000 Sobic004G002350 Sobic004G002350 Sobic002G371100--Sobic004G002350 Sobic002G371100--Sobic009G227400 Sobic001G005900--Sobic009G198500 Sobic001G005900--Sobic004G327300 Sobic004G300900 Sobic004G300900 Sobic001G005900--Sobic004G300900 Sobic001G048832 Sobic001G048832 Sobic001G005900--Sobic001G048832 Sobic002G078400 Sobic002G078400 Sobic001G005900--Sobic002G078400 Sobic001G502200 Sobic001G502200 Sobic001G005900--Sobic001G502200 Sobic001G005900--Sobic004G130900 Sobic001G005900--Sobic007G096700 Sobic001G005900--Sobic001G501200 Sobic002G073800 Sobic002G073800 Sobic004G099900--Sobic002G073800 Sobic004G099900--Sobic001G478000 Sobic004G099900--Sobic001G388600 Sobic003G244200 Sobic003G244200 Sobic004G099900--Sobic003G244200 Sobic007G100425 Sobic007G100425 Sobic004G099900--Sobic007G100425 Sobic004G099900--Sobic003G216500 Sobic010G103900 Sobic010G103900 Sobic004G099900--Sobic010G103900 Sobic010G018400 Sobic010G018400 Sobic004G099900--Sobic010G018400 Sobic004G099900--Sobic001G005900 Sobic005G111100 Sobic005G111100 Sobic007G152400--Sobic005G111100 Sobic007G091000 Sobic007G091000 Sobic007G152400--Sobic007G091000 Sobic007G152400--Sobic002G428200 Sobic002G257400 Sobic002G257400 Sobic007G152400--Sobic002G257400 Sobic001G128400 Sobic001G128400 Sobic007G152400--Sobic001G128400 Sobic001G481700 Sobic001G481700 Sobic007G152400--Sobic001G481700 Sobic008G137600 Sobic008G137600 Sobic007G152400--Sobic008G137600 Sobic004G204800 Sobic004G204800 Sobic007G152400--Sobic004G204800 Sobic002G331300 Sobic002G331300 Sobic007G152400--Sobic002G331300 Sobic002G410700 Sobic002G410700 Sobic003G216500--Sobic002G410700 Sobic004G182500 Sobic004G182500 Sobic003G216500--Sobic004G182500 Sobic009G240700 Sobic009G240700 Sobic003G216500--Sobic009G240700 Sobic001G473400 Sobic001G473400 Sobic003G216500--Sobic001G473400 Sobic003G170300 Sobic003G170300 Sobic003G216500--Sobic003G170300 Sobic003G216500--Sobic002G073800 Sobic003G279200 Sobic003G279200 Sobic003G216500--Sobic003G279200 Sobic006G020900 Sobic006G020900 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700
Octagon: transcription factors


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