Gene annotation
Transcriptome id Sobic.006G178000.1
Synonym Sb06g025260
Functional annotation coiled-coil domain-containing protein 124, putative, expressed
UniProt A0A1Z5REI1
Pfam PF06244
Panther DB PTHR21680 PTHR21680:SF0
NCBI CDD KOG3223; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16210 : -
RAP-DB (Rice) LOC_Os04g47370.1 : coiled-coil domain-containing protein 124, putative, expressed
MaizeGDB (Corn) Zm00025a010219
Brachypodium -
Barley -
Wheat TraesCS2D02G403700 , TraesCS2D02G403700 , TraesCS2A02G406800 , TraesCS2B02G424400 , TraesCS2B02G424400
Populus -


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cDNA sequences
Sobic.006G178000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
2 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -
3 Sobic.007G137600 NADP-dependent malate dehydrogenase(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
4 Sobic.003G279200 ubiquinone oxidoreductase, putative, expressed K03940: NADH dehydrogenase (ubiquinone) Fe-S protein 7
5 Sobic.010G026925 - K01689: ENO, enolase
6 Sobic.003G402600 ubiquitin family domain containing protein, expressed K12160: SUMO, small ubiquitin-related modifier
7 Sobic.004G057200 cytoplasmic membrane protein, putative, expressed -
8 Sobic.001G082000 zinc finger family protein, putative, expressed K06874: zinc finger protein
9 Sobic.003G308400 expressed protein -
10 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
11 Sobic.008G077600 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
12 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
13 Sobic.001G357300 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
14 Sobic.005G033200 expressed protein -
15 Sobic.002G408300 OsFBT11 - F-box and tubby domain containing protein, expressed -
16 Sobic.006G261300 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
17 Sobic.005G133900 TPR repeat region family protein, expressed -
18 Sobic.001G447900 OsFBO13 - F-box and other domain containing protein, expressed K10293: F-box protein 7
19 Sobic.002G306900 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
20 Sobic.002G242200 expressed protein -


Gene co-expression network
sample Sobic006G178000 Sobic006G178000 Sobic003G369500 Sobic003G369500 Sobic006G178000--Sobic003G369500 Sobic010G267500 Sobic010G267500 Sobic006G178000--Sobic010G267500 Sobic007G137600 Sobic007G137600 Sobic006G178000--Sobic007G137600 Sobic003G279200 Sobic003G279200 Sobic006G178000--Sobic003G279200 Sobic010G026925 Sobic010G026925 Sobic006G178000--Sobic010G026925 Sobic003G402600 Sobic003G402600 Sobic006G178000--Sobic003G402600 Sobic004G057200 Sobic004G057200 Sobic006G178000--Sobic004G057200 Sobic001G082000 Sobic001G082000 Sobic006G178000--Sobic001G082000 Sobic003G308400 Sobic003G308400 Sobic006G178000--Sobic003G308400 Sobic004G060600 Sobic004G060600 Sobic003G369500--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic003G369500--Sobic003G077900 Sobic009G131100 Sobic009G131100 Sobic003G369500--Sobic009G131100 Sobic001G428200 Sobic001G428200 Sobic003G369500--Sobic001G428200 Sobic007G091000 Sobic007G091000 Sobic003G369500--Sobic007G091000 Sobic001G428100 Sobic001G428100 Sobic003G369500--Sobic001G428100 Sobic007G044300 Sobic007G044300 Sobic003G369500--Sobic007G044300 Sobic003G369500--Sobic010G267500 Sobic003G277000 Sobic003G277000 Sobic003G369500--Sobic003G277000 Sobic006G207500 Sobic006G207500 Sobic010G267500--Sobic006G207500 Sobic010G267500--Sobic004G060600 Sobic007G097900 Sobic007G097900 Sobic010G267500--Sobic007G097900 Sobic010G267500--Sobic003G369500 Sobic010G267500--Sobic003G402600 Sobic007G226100 Sobic007G226100 Sobic010G267500--Sobic007G226100 Sobic003G361500 Sobic003G361500 Sobic010G267500--Sobic003G361500 Sobic004G001400 Sobic004G001400 Sobic010G267500--Sobic004G001400 Sobic008G137600 Sobic008G137600 Sobic010G267500--Sobic008G137600 Sobic007G137600--Sobic004G057200 Sobic006G175900 Sobic006G175900 Sobic007G137600--Sobic006G175900 Sobic003G373500 Sobic003G373500 Sobic007G137600--Sobic003G373500 Sobic002G358400 Sobic002G358400 Sobic007G137600--Sobic002G358400 Sobic001G357300 Sobic001G357300 Sobic007G137600--Sobic001G357300 Sobic010G027000 Sobic010G027000 Sobic007G137600--Sobic010G027000 Sobic007G137600--Sobic006G178000 Sobic004G121300 Sobic004G121300 Sobic007G137600--Sobic004G121300 Sobic007G137600--Sobic001G082000 Sobic003G216500 Sobic003G216500 Sobic003G279200--Sobic003G216500 Sobic001G116500 Sobic001G116500 Sobic003G279200--Sobic001G116500 Sobic002G410700 Sobic002G410700 Sobic003G279200--Sobic002G410700 Sobic006G237200 Sobic006G237200 Sobic003G279200--Sobic006G237200 Sobic003G279200--Sobic006G178000 Sobic003G190500 Sobic003G190500 Sobic003G279200--Sobic003G190500 Sobic002G396700 Sobic002G396700 Sobic003G279200--Sobic002G396700 Sobic006G020900 Sobic006G020900 Sobic003G279200--Sobic006G020900 Sobic006G276700 Sobic006G276700 Sobic003G279200--Sobic006G276700 Sobic003G336000 Sobic003G336000 Sobic010G026925--Sobic003G336000 Sobic005G033200 Sobic005G033200 Sobic010G026925--Sobic005G033200 Sobic010G026925--Sobic006G276700 Sobic001G301800 Sobic001G301800 Sobic010G026925--Sobic001G301800 Sobic001G290700 Sobic001G290700 Sobic010G026925--Sobic001G290700 Sobic010G026925--Sobic006G178000 Sobic010G026925--Sobic003G216500 Sobic010G026925--Sobic010G027000 Sobic009G017800 Sobic009G017800 Sobic010G026925--Sobic009G017800 Sobic006G011000 Sobic006G011000 Sobic003G402600--Sobic006G011000 Sobic010G178800 Sobic010G178800 Sobic003G402600--Sobic010G178800 Sobic003G402600--Sobic003G369500 Sobic003G402600--Sobic010G267500 Sobic009G015700 Sobic009G015700 Sobic003G402600--Sobic009G015700 Sobic006G211800 Sobic006G211800 Sobic003G402600--Sobic006G211800 Sobic004G012800 Sobic004G012800 Sobic003G402600--Sobic004G012800 Sobic001G250300 Sobic001G250300 Sobic003G402600--Sobic001G250300 Sobic002G428200 Sobic002G428200 Sobic003G402600--Sobic002G428200 Sobic002G133800 Sobic002G133800 Sobic004G057200--Sobic002G133800 Sobic005G133900 Sobic005G133900 Sobic004G057200--Sobic005G133900 Sobic004G057200--Sobic001G357300 Sobic002G363100 Sobic002G363100 Sobic004G057200--Sobic002G363100 Sobic007G114200 Sobic007G114200 Sobic004G057200--Sobic007G114200 Sobic004G057200--Sobic007G137600 Sobic003G367451 Sobic003G367451 Sobic004G057200--Sobic003G367451 Sobic010G188100 Sobic010G188100 Sobic004G057200--Sobic010G188100 Sobic006G261300 Sobic006G261300 Sobic004G057200--Sobic006G261300 Sobic008G116000 Sobic008G116000 Sobic001G082000--Sobic008G116000 Sobic002G389900 Sobic002G389900 Sobic001G082000--Sobic002G389900 Sobic004G115350 Sobic004G115350 Sobic001G082000--Sobic004G115350 Sobic003G099100 Sobic003G099100 Sobic001G082000--Sobic003G099100 Sobic002G311100 Sobic002G311100 Sobic001G082000--Sobic002G311100 Sobic004G310500 Sobic004G310500 Sobic001G082000--Sobic004G310500 Sobic008G089900 Sobic008G089900 Sobic001G082000--Sobic008G089900 Sobic002G166900 Sobic002G166900 Sobic001G082000--Sobic002G166900 Sobic001G019800 Sobic001G019800 Sobic001G082000--Sobic001G019800 Sobic010G032600 Sobic010G032600 Sobic003G308400--Sobic010G032600 Sobic008G129000 Sobic008G129000 Sobic003G308400--Sobic008G129000 Sobic003G141700 Sobic003G141700 Sobic003G308400--Sobic003G141700 Sobic001G308700 Sobic001G308700 Sobic003G308400--Sobic001G308700 Sobic001G122500 Sobic001G122500 Sobic003G308400--Sobic001G122500 Sobic006G230400 Sobic006G230400 Sobic003G308400--Sobic006G230400 Sobic001G391200 Sobic001G391200 Sobic003G308400--Sobic001G391200 Sobic007G195701 Sobic007G195701 Sobic003G308400--Sobic007G195701 Sobic001G038000 Sobic001G038000 Sobic003G308400--Sobic001G038000
Octagon: transcription factors


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