Gene annotation
Transcriptome id Sobic.004G057200.1
Synonym Sb04g004800
Functional annotation cytoplasmic membrane protein, putative, expressed
UniProt C5XW50
Pfam PF09835
Panther DB PTHR35102
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G33490 : -
RAP-DB (Rice) LOC_Os05g01510.1 : cytoplasmic membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a043840 , Zm00025a034787
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G133800 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
2 Sobic.005G133900 TPR repeat region family protein, expressed -
3 Sobic.001G357300 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
4 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
5 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein
6 Sobic.007G137600 NADP-dependent malate dehydrogenase(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
7 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6
8 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
9 Sobic.006G261300 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
10 Sobic.009G001400 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
11 Sobic.009G129800 endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
12 Sobic.001G220400 SNF7 domain containing protein, putative, expressed K12192: charged multivesicular body protein 2B
13 Sobic.001G444300 expressed protein -
14 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
15 Sobic.004G327300 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
16 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
17 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
18 Sobic.006G178000 coiled-coil domain-containing protein 124, putative, expressed -
19 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
20 Sobic.009G240900 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran


Gene co-expression network
sample Sobic004G057200 Sobic004G057200 Sobic002G133800 Sobic002G133800 Sobic004G057200--Sobic002G133800 Sobic005G133900 Sobic005G133900 Sobic004G057200--Sobic005G133900 Sobic001G357300 Sobic001G357300 Sobic004G057200--Sobic001G357300 Sobic002G363100 Sobic002G363100 Sobic004G057200--Sobic002G363100 Sobic007G114200 Sobic007G114200 Sobic004G057200--Sobic007G114200 Sobic007G137600 Sobic007G137600 Sobic004G057200--Sobic007G137600 Sobic003G367451 Sobic003G367451 Sobic004G057200--Sobic003G367451 Sobic010G188100 Sobic010G188100 Sobic004G057200--Sobic010G188100 Sobic006G261300 Sobic006G261300 Sobic004G057200--Sobic006G261300 Sobic002G133800--Sobic004G057200 Sobic002G133800--Sobic005G133900 Sobic001G422100 Sobic001G422100 Sobic002G133800--Sobic001G422100 Sobic002G133800--Sobic007G114200 Sobic007G136100 Sobic007G136100 Sobic002G133800--Sobic007G136100 Sobic002G133800--Sobic002G363100 Sobic001G236300 Sobic001G236300 Sobic002G133800--Sobic001G236300 Sobic009G257600 Sobic009G257600 Sobic002G133800--Sobic009G257600 Sobic001G283200 Sobic001G283200 Sobic002G133800--Sobic001G283200 Sobic005G133900--Sobic002G363100 Sobic005G133900--Sobic004G057200 Sobic003G244200 Sobic003G244200 Sobic005G133900--Sobic003G244200 Sobic005G133900--Sobic001G357300 Sobic009G093200 Sobic009G093200 Sobic005G133900--Sobic009G093200 Sobic003G216500 Sobic003G216500 Sobic005G133900--Sobic003G216500 Sobic005G133900--Sobic002G133800 Sobic006G002201 Sobic006G002201 Sobic005G133900--Sobic006G002201 Sobic009G240900 Sobic009G240900 Sobic005G133900--Sobic009G240900 Sobic001G357300--Sobic002G363100 Sobic001G357300--Sobic005G133900 Sobic001G357300--Sobic004G057200 Sobic002G306900 Sobic002G306900 Sobic001G357300--Sobic002G306900 Sobic010G277800 Sobic010G277800 Sobic001G357300--Sobic010G277800 Sobic009G217900 Sobic009G217900 Sobic001G357300--Sobic009G217900 Sobic009G001400 Sobic009G001400 Sobic001G357300--Sobic009G001400 Sobic010G019300 Sobic010G019300 Sobic001G357300--Sobic010G019300 Sobic001G357300--Sobic009G240900 Sobic002G363100--Sobic009G240900 Sobic001G040800 Sobic001G040800 Sobic002G363100--Sobic001G040800 Sobic002G363100--Sobic009G001400 Sobic002G363100--Sobic001G357300 Sobic002G363100--Sobic007G114200 Sobic002G363100--Sobic009G217900 Sobic001G005900 Sobic001G005900 Sobic002G363100--Sobic001G005900 Sobic004G130100 Sobic004G130100 Sobic002G363100--Sobic004G130100 Sobic004G327300 Sobic004G327300 Sobic002G363100--Sobic004G327300 Sobic007G045600 Sobic007G045600 Sobic007G114200--Sobic007G045600 Sobic007G114200--Sobic003G367451 Sobic007G114200--Sobic001G236300 Sobic007G114200--Sobic009G001400 Sobic002G428200 Sobic002G428200 Sobic007G114200--Sobic002G428200 Sobic006G252200 Sobic006G252200 Sobic007G114200--Sobic006G252200 Sobic002G214900 Sobic002G214900 Sobic007G114200--Sobic002G214900 Sobic007G114200--Sobic004G327300 Sobic004G138800 Sobic004G138800 Sobic007G114200--Sobic004G138800 Sobic007G137600--Sobic004G057200 Sobic006G175900 Sobic006G175900 Sobic007G137600--Sobic006G175900 Sobic003G373500 Sobic003G373500 Sobic007G137600--Sobic003G373500 Sobic002G358400 Sobic002G358400 Sobic007G137600--Sobic002G358400 Sobic007G137600--Sobic001G357300 Sobic010G027000 Sobic010G027000 Sobic007G137600--Sobic010G027000 Sobic006G178000 Sobic006G178000 Sobic007G137600--Sobic006G178000 Sobic004G121300 Sobic004G121300 Sobic007G137600--Sobic004G121300 Sobic001G082000 Sobic001G082000 Sobic007G137600--Sobic001G082000 Sobic003G367451--Sobic004G327300 Sobic003G367451--Sobic001G236300 Sobic003G367451--Sobic007G114200 Sobic001G433400 Sobic001G433400 Sobic003G367451--Sobic001G433400 Sobic004G272800 Sobic004G272800 Sobic003G367451--Sobic004G272800 Sobic002G083266 Sobic002G083266 Sobic003G367451--Sobic002G083266 Sobic004G130900 Sobic004G130900 Sobic003G367451--Sobic004G130900 Sobic003G253000 Sobic003G253000 Sobic003G367451--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic003G367451--Sobic003G220600 Sobic001G220400 Sobic001G220400 Sobic010G188100--Sobic001G220400 Sobic009G219900 Sobic009G219900 Sobic010G188100--Sobic009G219900 Sobic010G101500 Sobic010G101500 Sobic010G188100--Sobic010G101500 Sobic010G188100--Sobic003G367451 Sobic003G077900 Sobic003G077900 Sobic010G188100--Sobic003G077900 Sobic010G188100--Sobic009G001400 Sobic002G400000 Sobic002G400000 Sobic010G188100--Sobic002G400000 Sobic002G166900 Sobic002G166900 Sobic010G188100--Sobic002G166900 Sobic001G283500 Sobic001G283500 Sobic010G188100--Sobic001G283500 Sobic001G414500 Sobic001G414500 Sobic006G261300--Sobic001G414500 Sobic006G261300--Sobic009G219900 Sobic006G261300--Sobic001G220400 Sobic008G089900 Sobic008G089900 Sobic006G261300--Sobic008G089900 Sobic001G143000 Sobic001G143000 Sobic006G261300--Sobic001G143000 Sobic006G083800 Sobic006G083800 Sobic006G261300--Sobic006G083800 Sobic003G416400 Sobic003G416400 Sobic006G261300--Sobic003G416400 Sobic001G511900 Sobic001G511900 Sobic006G261300--Sobic001G511900 Sobic009G187400 Sobic009G187400 Sobic006G261300--Sobic009G187400
Octagon: transcription factors


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