Gene annotation
Transcriptome id Sobic.002G408300.1
Synonym AtTLP3, TLP3, Sb02g042210
Functional annotation OsFBT11 - F-box and tubby domain containing protein, expressed
UniProt C5X4V0
Pfam PF00646 PF01167
Panther DB PTHR16517 PTHR16517:SF36
NCBI CDD KOG2502; Tub family proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G47900 : tubby like protein 3
RAP-DB (Rice) LOC_Os07g47110.1 : OsFBT11 - F-box and tubby domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056400 , Zm00025a054023 , Zm00025a053926
Brachypodium KQK14750 , PNT74595
Barley -
Wheat TraesCS2D02G122900 , TraesCS2B02G141800 , TraesCS2A02G120900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
2 Sobic.006G261300 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
3 Sobic.006G178000 coiled-coil domain-containing protein 124, putative, expressed -
4 Sobic.001G143000 Phosphatase(PubMedID : 30367619)@BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
5 Sobic.003G157900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycine-rich protein, putative, expressed -
6 Sobic.002G128900 thioesterase family protein, putative, expressed -
7 Sobic.008G077600 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
8 Sobic.004G324100 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
9 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
10 Sobic.010G156000 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.002G036400 OsFBK18 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.004G283700 OsFBX58 - F-box domain containing protein, expressed -
13 Sobic.007G108400 expressed protein -
14 Sobic.004G097200 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
15 Sobic.002G137300 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
16 Sobic.009G190600 oryzain alpha chain precursor, putative, expressed -
17 Sobic.005G133900 TPR repeat region family protein, expressed -
18 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
19 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
20 Sobic.001G417900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4


Gene co-expression network
sample Sobic002G408300 Sobic002G408300 Sobic003G373600 Sobic003G373600 Sobic002G408300--Sobic003G373600 Sobic006G261300 Sobic006G261300 Sobic002G408300--Sobic006G261300 Sobic006G178000 Sobic006G178000 Sobic002G408300--Sobic006G178000 Sobic001G143000 Sobic001G143000 Sobic002G408300--Sobic001G143000 Sobic003G157900 Sobic003G157900 Sobic002G408300--Sobic003G157900 Sobic002G128900 Sobic002G128900 Sobic002G408300--Sobic002G128900 Sobic008G077600 Sobic008G077600 Sobic002G408300--Sobic008G077600 Sobic004G324100 Sobic004G324100 Sobic002G408300--Sobic004G324100 Sobic008G089900 Sobic008G089900 Sobic002G408300--Sobic008G089900 Sobic003G373600--Sobic003G157900 Sobic005G062700 Sobic005G062700 Sobic003G373600--Sobic005G062700 Sobic003G425300 Sobic003G425300 Sobic003G373600--Sobic003G425300 Sobic003G381700 Sobic003G381700 Sobic003G373600--Sobic003G381700 Sobic005G172400 Sobic005G172400 Sobic003G373600--Sobic005G172400 Sobic001G276300 Sobic001G276300 Sobic003G373600--Sobic001G276300 Sobic007G079400 Sobic007G079400 Sobic003G373600--Sobic007G079400 Sobic008G077500 Sobic008G077500 Sobic003G373600--Sobic008G077500 Sobic008G187100 Sobic008G187100 Sobic003G373600--Sobic008G187100 Sobic001G414500 Sobic001G414500 Sobic006G261300--Sobic001G414500 Sobic009G219900 Sobic009G219900 Sobic006G261300--Sobic009G219900 Sobic001G220400 Sobic001G220400 Sobic006G261300--Sobic001G220400 Sobic006G261300--Sobic008G089900 Sobic006G261300--Sobic001G143000 Sobic006G083800 Sobic006G083800 Sobic006G261300--Sobic006G083800 Sobic003G416400 Sobic003G416400 Sobic006G261300--Sobic003G416400 Sobic001G511900 Sobic001G511900 Sobic006G261300--Sobic001G511900 Sobic009G187400 Sobic009G187400 Sobic006G261300--Sobic009G187400 Sobic003G369500 Sobic003G369500 Sobic006G178000--Sobic003G369500 Sobic010G267500 Sobic010G267500 Sobic006G178000--Sobic010G267500 Sobic007G137600 Sobic007G137600 Sobic006G178000--Sobic007G137600 Sobic003G279200 Sobic003G279200 Sobic006G178000--Sobic003G279200 Sobic010G026925 Sobic010G026925 Sobic006G178000--Sobic010G026925 Sobic003G402600 Sobic003G402600 Sobic006G178000--Sobic003G402600 Sobic004G057200 Sobic004G057200 Sobic006G178000--Sobic004G057200 Sobic001G082000 Sobic001G082000 Sobic006G178000--Sobic001G082000 Sobic003G308400 Sobic003G308400 Sobic006G178000--Sobic003G308400 Sobic001G143000--Sobic006G261300 Sobic005G142700 Sobic005G142700 Sobic001G143000--Sobic005G142700 Sobic001G143000--Sobic003G157900 Sobic001G143000--Sobic009G187400 Sobic001G143000--Sobic008G089900 Sobic002G290400 Sobic002G290400 Sobic001G143000--Sobic002G290400 Sobic009G258100 Sobic009G258100 Sobic001G143000--Sobic009G258100 Sobic003G141000 Sobic003G141000 Sobic001G143000--Sobic003G141000 Sobic001G143000--Sobic003G373600 Sobic007G090900 Sobic007G090900 Sobic003G157900--Sobic007G090900 Sobic006G212800 Sobic006G212800 Sobic003G157900--Sobic006G212800 Sobic003G380200 Sobic003G380200 Sobic003G157900--Sobic003G380200 Sobic009G103000 Sobic009G103000 Sobic003G157900--Sobic009G103000 Sobic002G136100 Sobic002G136100 Sobic003G157900--Sobic002G136100 Sobic002G275100 Sobic002G275100 Sobic003G157900--Sobic002G275100 Sobic004G267700 Sobic004G267700 Sobic003G157900--Sobic004G267700 Sobic002G162400 Sobic002G162400 Sobic003G157900--Sobic002G162400 Sobic006G213700 Sobic006G213700 Sobic003G157900--Sobic006G213700 Sobic010G140600 Sobic010G140600 Sobic002G128900--Sobic010G140600 Sobic002G279700 Sobic002G279700 Sobic002G128900--Sobic002G279700 Sobic001G295300 Sobic001G295300 Sobic002G128900--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G128900--Sobic002G200900 Sobic004G281900 Sobic004G281900 Sobic002G128900--Sobic004G281900 Sobic002G072400 Sobic002G072400 Sobic002G128900--Sobic002G072400 Sobic008G096800 Sobic008G096800 Sobic002G128900--Sobic008G096800 Sobic010G269400 Sobic010G269400 Sobic002G128900--Sobic010G269400 Sobic008G144800 Sobic008G144800 Sobic002G128900--Sobic008G144800 Sobic010G165500 Sobic010G165500 Sobic008G077600--Sobic010G165500 Sobic010G232100 Sobic010G232100 Sobic008G077600--Sobic010G232100 Sobic008G077600--Sobic009G258100 Sobic006G099700 Sobic006G099700 Sobic008G077600--Sobic006G099700 Sobic008G077600--Sobic001G143000 Sobic001G450700 Sobic001G450700 Sobic008G077600--Sobic001G450700 Sobic003G238000 Sobic003G238000 Sobic008G077600--Sobic003G238000 Sobic008G077600--Sobic006G178000 Sobic008G077600--Sobic006G261300 Sobic006G155500 Sobic006G155500 Sobic004G324100--Sobic006G155500 Sobic009G141400 Sobic009G141400 Sobic004G324100--Sobic009G141400 Sobic001G118400 Sobic001G118400 Sobic004G324100--Sobic001G118400 Sobic003G328100 Sobic003G328100 Sobic004G324100--Sobic003G328100 Sobic006G140700 Sobic006G140700 Sobic004G324100--Sobic006G140700 Sobic008G037800 Sobic008G037800 Sobic004G324100--Sobic008G037800 Sobic004G324100--Sobic004G281900 Sobic006G026100 Sobic006G026100 Sobic004G324100--Sobic006G026100 Sobic001G286600 Sobic001G286600 Sobic004G324100--Sobic001G286600 Sobic008G089900--Sobic006G083800 Sobic009G162600 Sobic009G162600 Sobic008G089900--Sobic009G162600 Sobic004G103000 Sobic004G103000 Sobic008G089900--Sobic004G103000 Sobic002G204200 Sobic002G204200 Sobic008G089900--Sobic002G204200 Sobic002G001000 Sobic002G001000 Sobic008G089900--Sobic002G001000 Sobic008G089900--Sobic001G414500 Sobic001G243200 Sobic001G243200 Sobic008G089900--Sobic001G243200 Sobic008G089900--Sobic009G187400 Sobic009G207300 Sobic009G207300 Sobic008G089900--Sobic009G207300
Octagon: transcription factors


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