Gene annotation
Transcriptome id Sobic.009G190600.1
Synonym XBCP3, Sb09g024940
Functional annotation oryzain alpha chain precursor, putative, expressed
UniProt C5Z0G3
Pfam PF00396 PF08246 PF00112
Panther DB PTHR12411 PTHR12411:SF387
NCBI CDD KOG1543; Cysteine proteinase Cathepsin L
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G09850 : xylem bark cysteine peptidase 3
RAP-DB (Rice) LOC_Os05g43230.1 : oryzain alpha chain precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044166
Brachypodium KQK05513
Barley HORVU1Hr1G075530.6 , HORVU1Hr1G075530.5 , HORVU1Hr1G075530.3 , HORVU1Hr1G075530.2 , HORVU1Hr1G075530.1
Wheat TraesCS1B02G338500 , TraesCS1D02G327000 , TraesCS1D02G327000 , TraesCS1A02G325400
Populus -


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cDNA sequences
Sobic.009G190600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G292000 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
2 Sobic.007G108400 expressed protein -
3 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
4 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
5 Sobic.008G114300 acetyl-CoA carboxylase, putative, expressed K11262: acetyl-CoA carboxylase / biotin carboxylase 1
6 Sobic.002G128900 thioesterase family protein, putative, expressed -
7 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
8 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
9 Sobic.002G349100 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
10 Sobic.001G222600 cyanate hydratase, putative, expressed K01725: cyanate lyase
11 Sobic.006G084400 OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
12 Sobic.002G401000 uncharacterized UPF0114 domain containing protein, expressed -
13 Sobic.009G207300 ubiquitin domain-containing protein 1, putative, expressed -
14 Sobic.005G084800 expressed protein -
15 Sobic.010G177400 dehydrogenase/reductase SDR family member 12, putative, expressed K11168: dehydrogenase/reductase SDR family member 12
16 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
17 Sobic.001G033100 expressed protein -
18 Sobic.010G174400 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
19 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
20 Sobic.001G469700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase


Gene co-expression network
sample Sobic009G190600 Sobic009G190600 Sobic001G292000 Sobic001G292000 Sobic009G190600--Sobic001G292000 Sobic007G108400 Sobic007G108400 Sobic009G190600--Sobic007G108400 Sobic002G072400 Sobic002G072400 Sobic009G190600--Sobic002G072400 Sobic007G079400 Sobic007G079400 Sobic009G190600--Sobic007G079400 Sobic008G114300 Sobic008G114300 Sobic009G190600--Sobic008G114300 Sobic002G128900 Sobic002G128900 Sobic009G190600--Sobic002G128900 Sobic002G200900 Sobic002G200900 Sobic009G190600--Sobic002G200900 Sobic004G238200 Sobic004G238200 Sobic009G190600--Sobic004G238200 Sobic002G349100 Sobic002G349100 Sobic009G190600--Sobic002G349100 Sobic003G313900 Sobic003G313900 Sobic001G292000--Sobic003G313900 Sobic001G292000--Sobic009G190600 Sobic005G062700 Sobic005G062700 Sobic001G292000--Sobic005G062700 Sobic003G437800 Sobic003G437800 Sobic001G292000--Sobic003G437800 Sobic003G051000 Sobic003G051000 Sobic001G292000--Sobic003G051000 Sobic003G425300 Sobic003G425300 Sobic001G292000--Sobic003G425300 Sobic008G089900 Sobic008G089900 Sobic001G292000--Sobic008G089900 Sobic001G104900 Sobic001G104900 Sobic001G292000--Sobic001G104900 Sobic009G129800 Sobic009G129800 Sobic001G292000--Sobic009G129800 Sobic007G108400--Sobic007G079400 Sobic007G108400--Sobic009G190600 Sobic003G105900 Sobic003G105900 Sobic007G108400--Sobic003G105900 Sobic007G108400--Sobic004G238200 Sobic001G057700 Sobic001G057700 Sobic007G108400--Sobic001G057700 Sobic007G108400--Sobic001G292000 Sobic003G264800 Sobic003G264800 Sobic007G108400--Sobic003G264800 Sobic010G259100 Sobic010G259100 Sobic007G108400--Sobic010G259100 Sobic007G108400--Sobic002G072400 Sobic004G207400 Sobic004G207400 Sobic002G072400--Sobic004G207400 Sobic002G072400--Sobic002G349100 Sobic004G317700 Sobic004G317700 Sobic002G072400--Sobic004G317700 Sobic002G072400--Sobic004G238200 Sobic002G129400 Sobic002G129400 Sobic002G072400--Sobic002G129400 Sobic004G307100 Sobic004G307100 Sobic002G072400--Sobic004G307100 Sobic004G281900 Sobic004G281900 Sobic002G072400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic002G072400--Sobic007G166200 Sobic002G081400 Sobic002G081400 Sobic002G072400--Sobic002G081400 Sobic007G079400--Sobic007G108400 Sobic007G079400--Sobic003G105900 Sobic007G079400--Sobic001G057700 Sobic007G079400--Sobic003G264800 Sobic002G401000 Sobic002G401000 Sobic007G079400--Sobic002G401000 Sobic003G373600 Sobic003G373600 Sobic007G079400--Sobic003G373600 Sobic002G393700 Sobic002G393700 Sobic007G079400--Sobic002G393700 Sobic007G079400--Sobic005G062700 Sobic004G344000 Sobic004G344000 Sobic007G079400--Sobic004G344000 Sobic008G114300--Sobic002G200900 Sobic004G055500 Sobic004G055500 Sobic008G114300--Sobic004G055500 Sobic002G304100 Sobic002G304100 Sobic008G114300--Sobic002G304100 Sobic010G174400 Sobic010G174400 Sobic008G114300--Sobic010G174400 Sobic008G114300--Sobic002G349100 Sobic004G296400 Sobic004G296400 Sobic008G114300--Sobic004G296400 Sobic008G114300--Sobic009G190600 Sobic004G011300 Sobic004G011300 Sobic008G114300--Sobic004G011300 Sobic002G043600 Sobic002G043600 Sobic008G114300--Sobic002G043600 Sobic010G140600 Sobic010G140600 Sobic002G128900--Sobic010G140600 Sobic002G279700 Sobic002G279700 Sobic002G128900--Sobic002G279700 Sobic001G295300 Sobic001G295300 Sobic002G128900--Sobic001G295300 Sobic002G128900--Sobic002G200900 Sobic002G128900--Sobic004G281900 Sobic002G128900--Sobic002G072400 Sobic008G096800 Sobic008G096800 Sobic002G128900--Sobic008G096800 Sobic010G269400 Sobic010G269400 Sobic002G128900--Sobic010G269400 Sobic008G144800 Sobic008G144800 Sobic002G128900--Sobic008G144800 Sobic006G108200 Sobic006G108200 Sobic002G200900--Sobic006G108200 Sobic002G200900--Sobic004G281900 Sobic002G351600 Sobic002G351600 Sobic002G200900--Sobic002G351600 Sobic001G220000 Sobic001G220000 Sobic002G200900--Sobic001G220000 Sobic004G055000 Sobic004G055000 Sobic002G200900--Sobic004G055000 Sobic003G275200 Sobic003G275200 Sobic002G200900--Sobic003G275200 Sobic006G155500 Sobic006G155500 Sobic002G200900--Sobic006G155500 Sobic006G050400 Sobic006G050400 Sobic002G200900--Sobic006G050400 Sobic002G159100 Sobic002G159100 Sobic002G200900--Sobic002G159100 Sobic003G232700 Sobic003G232700 Sobic004G238200--Sobic003G232700 Sobic004G238200--Sobic004G207400 Sobic001G500600 Sobic001G500600 Sobic004G238200--Sobic001G500600 Sobic005G084500 Sobic005G084500 Sobic004G238200--Sobic005G084500 Sobic001G516901 Sobic001G516901 Sobic004G238200--Sobic001G516901 Sobic004G238200--Sobic002G072400 Sobic007G005400 Sobic007G005400 Sobic004G238200--Sobic007G005400 Sobic006G197300 Sobic006G197300 Sobic004G238200--Sobic006G197300 Sobic006G232600 Sobic006G232600 Sobic004G238200--Sobic006G232600 Sobic002G349100--Sobic002G072400 Sobic002G349100--Sobic002G129400 Sobic002G349100--Sobic004G317700 Sobic008G081900 Sobic008G081900 Sobic002G349100--Sobic008G081900 Sobic002G349100--Sobic004G207400 Sobic001G219700 Sobic001G219700 Sobic002G349100--Sobic001G219700 Sobic002G349100--Sobic004G238200 Sobic009G162600 Sobic009G162600 Sobic002G349100--Sobic009G162600 Sobic004G300100 Sobic004G300100 Sobic002G349100--Sobic004G300100
Octagon: transcription factors


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