Gene annotation
Transcriptome id Sobic.010G177400.1
Synonym Sb10g022920
Functional annotation dehydrogenase/reductase SDR family member 12, putative, expressed
UniProt C5Z571
Pfam PF00106
Panther DB PTHR24320 PTHR24320:SF70
NCBI CDD KOG1208; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
KEGG Orthology K11168; dehydrogenase/reductase SDR family member 12
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G09750 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os06g39040.1 : dehydrogenase/reductase SDR family member 12, putative, expressed
MaizeGDB (Corn) Zm00025a051267
Brachypodium PNT75714 , KQK17852 , KQK17853
Barley HORVU7Hr1G085570.6 , HORVU7Hr1G085570.7 , HORVU7Hr1G085570.4 , HORVU7Hr1G085570.5 , HORVU7Hr1G085570.2 , HORVU7Hr1G085570.3 , HORVU7Hr1G085570.1 , HORVU7Hr1G085570.8 , HORVU7Hr1G085570.9
Wheat TraesCS7A02G368300 , TraesCS7A02G368300 , TraesCS7B02G260200 , TraesCS7D02G354600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
2 Sobic.001G021000 nicotinate phosphoribosyltransferase family domain containing protein, expressed K00763: pncB, nicotinate phosphoribosyltransferase
3 Sobic.003G190400 rossmann fold nucleotide-binding protein involved in DNA uptake, putative, expressed -
4 Sobic.008G167600 VTC2, putative, expressed -
5 Sobic.010G227100 BTB/POZ domain containing protein, putative, expressed -
6 Sobic.007G190000 expressed protein -
7 Sobic.003G198800 myosin, putative, expressed K10357: myosin V
8 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
9 Sobic.002G341000 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
10 Sobic.002G349100 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
11 Sobic.001G062300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
12 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
13 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
15 Sobic.007G160700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
16 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
17 Sobic.008G039100 SacI homology domain containing protein, expressed -
18 Sobic.002G243800 BPI/LBP family protein At3g20270 precursor, putative, expressed -
19 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
20 Sobic.004G317700 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase


Gene co-expression network
sample Sobic010G177400 Sobic010G177400 Sobic006G257800 Sobic006G257800 Sobic010G177400--Sobic006G257800 Sobic001G021000 Sobic001G021000 Sobic010G177400--Sobic001G021000 Sobic003G190400 Sobic003G190400 Sobic010G177400--Sobic003G190400 Sobic008G167600 Sobic008G167600 Sobic010G177400--Sobic008G167600 Sobic010G227100 Sobic010G227100 Sobic010G177400--Sobic010G227100 Sobic007G190000 Sobic007G190000 Sobic010G177400--Sobic007G190000 Sobic003G198800 Sobic003G198800 Sobic010G177400--Sobic003G198800 Sobic002G383600 Sobic002G383600 Sobic010G177400--Sobic002G383600 Sobic002G341000 Sobic002G341000 Sobic010G177400--Sobic002G341000 Sobic006G257800--Sobic008G167600 Sobic004G189200 Sobic004G189200 Sobic006G257800--Sobic004G189200 Sobic006G257800--Sobic003G198800 Sobic006G257800--Sobic002G383600 Sobic001G062300 Sobic001G062300 Sobic006G257800--Sobic001G062300 Sobic006G257800--Sobic010G177400 Sobic002G295100 Sobic002G295100 Sobic006G257800--Sobic002G295100 Sobic006G051800 Sobic006G051800 Sobic006G257800--Sobic006G051800 Sobic006G257800--Sobic002G341000 Sobic001G021000--Sobic010G177400 Sobic005G134100 Sobic005G134100 Sobic001G021000--Sobic005G134100 Sobic004G317700 Sobic004G317700 Sobic001G021000--Sobic004G317700 Sobic003G105900 Sobic003G105900 Sobic001G021000--Sobic003G105900 Sobic010G047700 Sobic010G047700 Sobic001G021000--Sobic010G047700 Sobic002G349100 Sobic002G349100 Sobic001G021000--Sobic002G349100 Sobic001G220000 Sobic001G220000 Sobic001G021000--Sobic001G220000 Sobic004G125800 Sobic004G125800 Sobic001G021000--Sobic004G125800 Sobic006G221000 Sobic006G221000 Sobic001G021000--Sobic006G221000 Sobic010G020800 Sobic010G020800 Sobic003G190400--Sobic010G020800 Sobic003G301900 Sobic003G301900 Sobic003G190400--Sobic003G301900 Sobic002G187700 Sobic002G187700 Sobic003G190400--Sobic002G187700 Sobic005G084500 Sobic005G084500 Sobic003G190400--Sobic005G084500 Sobic003G190400--Sobic007G190000 Sobic004G356700 Sobic004G356700 Sobic003G190400--Sobic004G356700 Sobic002G146300 Sobic002G146300 Sobic003G190400--Sobic002G146300 Sobic004G169000 Sobic004G169000 Sobic003G190400--Sobic004G169000 Sobic006G002300 Sobic006G002300 Sobic003G190400--Sobic006G002300 Sobic008G167600--Sobic006G257800 Sobic004G151300 Sobic004G151300 Sobic008G167600--Sobic004G151300 Sobic002G291800 Sobic002G291800 Sobic008G167600--Sobic002G291800 Sobic004G312600 Sobic004G312600 Sobic008G167600--Sobic004G312600 Sobic004G127800 Sobic004G127800 Sobic008G167600--Sobic004G127800 Sobic002G293500 Sobic002G293500 Sobic008G167600--Sobic002G293500 Sobic002G081400 Sobic002G081400 Sobic008G167600--Sobic002G081400 Sobic006G090100 Sobic006G090100 Sobic008G167600--Sobic006G090100 Sobic001G333800 Sobic001G333800 Sobic008G167600--Sobic001G333800 Sobic002G243800 Sobic002G243800 Sobic010G227100--Sobic002G243800 Sobic010G227100--Sobic002G383600 Sobic003G372500 Sobic003G372500 Sobic010G227100--Sobic003G372500 Sobic006G275100 Sobic006G275100 Sobic010G227100--Sobic006G275100 Sobic010G227100--Sobic007G190000 Sobic007G075400 Sobic007G075400 Sobic010G227100--Sobic007G075400 Sobic010G227100--Sobic002G146300 Sobic009G074400 Sobic009G074400 Sobic010G227100--Sobic009G074400 Sobic009G053900 Sobic009G053900 Sobic010G227100--Sobic009G053900 Sobic010G074300 Sobic010G074300 Sobic007G190000--Sobic010G074300 Sobic004G179300 Sobic004G179300 Sobic007G190000--Sobic004G179300 Sobic007G190000--Sobic003G372500 Sobic007G190000--Sobic010G227100 Sobic007G190000--Sobic002G146300 Sobic007G190000--Sobic010G020800 Sobic007G190000--Sobic009G074400 Sobic010G147100 Sobic010G147100 Sobic007G190000--Sobic010G147100 Sobic007G190000--Sobic004G189200 Sobic001G534700 Sobic001G534700 Sobic003G198800--Sobic001G534700 Sobic003G198800--Sobic009G074400 Sobic003G275700 Sobic003G275700 Sobic003G198800--Sobic003G275700 Sobic003G198800--Sobic006G257800 Sobic003G155100 Sobic003G155100 Sobic003G198800--Sobic003G155100 Sobic001G128300 Sobic001G128300 Sobic003G198800--Sobic001G128300 Sobic001G481900 Sobic001G481900 Sobic003G198800--Sobic001G481900 Sobic008G151100 Sobic008G151100 Sobic003G198800--Sobic008G151100 Sobic002G411600 Sobic002G411600 Sobic003G198800--Sobic002G411600 Sobic002G383600--Sobic006G257800 Sobic002G383600--Sobic010G227100 Sobic002G383600--Sobic006G051800 Sobic002G383600--Sobic009G074400 Sobic004G001500 Sobic004G001500 Sobic002G383600--Sobic004G001500 Sobic003G107500 Sobic003G107500 Sobic002G383600--Sobic003G107500 Sobic002G383600--Sobic004G189200 Sobic002G383600--Sobic006G275100 Sobic002G383600--Sobic007G190000 Sobic002G341000--Sobic004G151300 Sobic002G341000--Sobic004G169000 Sobic003G271400 Sobic003G271400 Sobic002G341000--Sobic003G271400 Sobic002G341000--Sobic006G257800 Sobic003G191700 Sobic003G191700 Sobic002G341000--Sobic003G191700 Sobic002G341000--Sobic008G167600 Sobic001G207800 Sobic001G207800 Sobic002G341000--Sobic001G207800 Sobic002G341000--Sobic004G312600 Sobic003G264800 Sobic003G264800 Sobic002G341000--Sobic003G264800
Octagon: transcription factors


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