Gene annotation
Transcriptome id Sobic.008G039100.2
Synonym Sb08g003370, RHD4
Functional annotation SacI homology domain containing protein, expressed
UniProt A0A1Z5R5K7
Pfam PF02383
Panther DB PTHR11200 PTHR11200:SF160
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51460 : Phosphoinositide phosphatase family protein
RAP-DB (Rice) LOC_Os02g34884.1 : SacI homology domain containing protein, expressed
MaizeGDB (Corn) Zm00025a012691 , Zm00025a012706 , Zm00025a020658 , Zm00025a031599
Brachypodium PNT63698 , PNT63699 , KQJ88639 , PNT63700 , KQJ92216 , KQJ92217 , KQJ92218
Barley HORVU1Hr1G088110.9 , HORVU1Hr1G088110.8 , HORVU1Hr1G088110.1 , HORVU1Hr1G088110.3 , HORVU1Hr1G088110.2 , HORVU1Hr1G088110.5 , HORVU1Hr1G088110.4 , HORVU1Hr1G088110.7 , HORVU1Hr1G088110.6 , HORVU1Hr1G088110.11 , HORVU1Hr1G088110.10 , HORVU1Hr1G088110.13
Wheat TraesCS1A02G400300 , TraesCS1B02G024700 , TraesCS1A02G020700 , TraesCS1D02G408100 , TraesCS1D02G408100 , TraesCS1B02G428900 , TraesCS1B02G428900 , TraesCS1B02G428900 , TraesCS1D02G020200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
2 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
3 Sobic.004G001500 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
4 Sobic.003G388100 expressed protein -
5 Sobic.004G143475 - -
6 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
7 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
8 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
9 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
10 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
11 Sobic.004G356700 oligopeptidase, putative, expressed K01414: oligopeptidase A
12 Sobic.006G050700 disease resistance RPP13-like protein 1, putative, expressed -
13 Sobic.001G230000 expressed protein K10779: transcriptional regulator ATRX
14 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
15 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
16 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
17 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
18 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
19 Sobic.007G133700 expressed protein -
20 Sobic.001G451450 - -


Gene co-expression network
sample Sobic008G039100 Sobic008G039100 Sobic002G146300 Sobic002G146300 Sobic008G039100--Sobic002G146300 Sobic008G001200 Sobic008G001200 Sobic008G039100--Sobic008G001200 Sobic004G001500 Sobic004G001500 Sobic008G039100--Sobic004G001500 Sobic003G388100 Sobic003G388100 Sobic008G039100--Sobic003G388100 Sobic004G143475 Sobic004G143475 Sobic008G039100--Sobic004G143475 Sobic003G205200 Sobic003G205200 Sobic008G039100--Sobic003G205200 Sobic001G454500 Sobic001G454500 Sobic008G039100--Sobic001G454500 Sobic006G219600 Sobic006G219600 Sobic008G039100--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic008G039100--Sobic003G155100 Sobic002G146300--Sobic003G205200 Sobic001G370900 Sobic001G370900 Sobic002G146300--Sobic001G370900 Sobic010G139600 Sobic010G139600 Sobic002G146300--Sobic010G139600 Sobic005G001000 Sobic005G001000 Sobic002G146300--Sobic005G001000 Sobic002G146300--Sobic004G001500 Sobic002G146300--Sobic008G001200 Sobic001G194200 Sobic001G194200 Sobic002G146300--Sobic001G194200 Sobic007G075400 Sobic007G075400 Sobic002G146300--Sobic007G075400 Sobic009G256400 Sobic009G256400 Sobic002G146300--Sobic009G256400 Sobic008G001200--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic008G001200--Sobic003G205200 Sobic010G010700 Sobic010G010700 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic008G001200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic004G001500--Sobic002G146300 Sobic003G043200 Sobic003G043200 Sobic004G001500--Sobic003G043200 Sobic005G187300 Sobic005G187300 Sobic004G001500--Sobic005G187300 Sobic004G001500--Sobic001G370900 Sobic001G457800 Sobic001G457800 Sobic004G001500--Sobic001G457800 Sobic004G001500--Sobic009G256400 Sobic003G166750 Sobic003G166750 Sobic004G001500--Sobic003G166750 Sobic004G356700 Sobic004G356700 Sobic004G001500--Sobic004G356700 Sobic001G527800 Sobic001G527800 Sobic004G001500--Sobic001G527800 Sobic003G388100--Sobic008G001200 Sobic003G388100--Sobic001G454500 Sobic003G388100--Sobic010G206900 Sobic001G365900 Sobic001G365900 Sobic003G388100--Sobic001G365900 Sobic010G123600 Sobic010G123600 Sobic003G388100--Sobic010G123600 Sobic003G388100--Sobic003G155100 Sobic009G256300 Sobic009G256300 Sobic003G388100--Sobic009G256300 Sobic003G389200 Sobic003G389200 Sobic003G388100--Sobic003G389200 Sobic001G230000 Sobic001G230000 Sobic003G388100--Sobic001G230000 Sobic004G143475--Sobic002G146300 Sobic004G143475--Sobic008G001200 Sobic004G143475--Sobic001G230000 Sobic004G143475--Sobic001G457800 Sobic004G143475--Sobic004G001500 Sobic004G143475--Sobic003G155100 Sobic004G146600 Sobic004G146600 Sobic004G143475--Sobic004G146600 Sobic004G143475--Sobic009G256400 Sobic004G143475--Sobic003G205200 Sobic003G205200--Sobic002G146300 Sobic003G205200--Sobic005G001000 Sobic003G205200--Sobic008G001200 Sobic003G205200--Sobic001G370900 Sobic003G186000 Sobic003G186000 Sobic003G205200--Sobic003G186000 Sobic003G205200--Sobic010G139600 Sobic003G205200--Sobic004G276400 Sobic003G205200--Sobic001G194200 Sobic008G098900 Sobic008G098900 Sobic003G205200--Sobic008G098900 Sobic001G454500--Sobic003G388100 Sobic008G130100 Sobic008G130100 Sobic001G454500--Sobic008G130100 Sobic006G133900 Sobic006G133900 Sobic001G454500--Sobic006G133900 Sobic001G375100 Sobic001G375100 Sobic001G454500--Sobic001G375100 Sobic001G454500--Sobic001G365900 Sobic001G454500--Sobic008G001200 Sobic001G454500--Sobic010G010700 Sobic001G454500--Sobic003G155100 Sobic003G247500 Sobic003G247500 Sobic001G454500--Sobic003G247500 Sobic006G219600--Sobic003G155100 Sobic009G201300 Sobic009G201300 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G050700 Sobic006G050700 Sobic006G219600--Sobic006G050700 Sobic001G298900 Sobic001G298900 Sobic006G219600--Sobic001G298900 Sobic006G219600--Sobic006G133900 Sobic001G133000 Sobic001G133000 Sobic006G219600--Sobic001G133000 Sobic005G106600 Sobic005G106600 Sobic006G219600--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic006G219600--Sobic005G084500 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic003G155100--Sobic001G230000 Sobic003G155100--Sobic001G375100 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900
Octagon: transcription factors


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