Gene annotation
Transcriptome id Sobic.010G174400.1
Synonym Sb10g022680
Functional annotation Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
UniProt A0A194YJV8
Pfam PF13847
Panther DB PTHR10108 PTHR10108:SF791
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33110 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g37610.1 : Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
MaizeGDB (Corn) Zm00025a050858 , Zm00025a051139 , Zm00025a018082
Brachypodium KQK17890
Barley HORVU7Hr1G086570.3 , HORVU7Hr1G086570.2 , HORVU7Hr1G086570.1
Wheat TraesCS7B02G263800 , TraesCS7B02G263800 , TraesCS7A02G364100 , TraesCS7D02G359100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G011300 S1 RNA binding domain containing protein, expressed -
2 Sobic.008G114300 acetyl-CoA carboxylase, putative, expressed K11262: acetyl-CoA carboxylase / biotin carboxylase 1
3 Sobic.005G084800 expressed protein -
4 Sobic.008G130000 PPR repeat domain containing protein, putative, expressed -
5 Sobic.001G168250 - -
6 Sobic.004G055500 inositol-1-monophosphatase, putative, expressed K01092: E3.1.3.25, IMPA, myo-inositol-1(or 4)-monophosphatase
7 Sobic.002G304100 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase
8 Sobic.003G160200 multidrug resistance-associated protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
9 Sobic.001G531400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
10 Sobic.001G309300 expressed protein -
11 Sobic.001G308200 cytochrome P450 97B2, putative, expressed K09837: LUT1, carotenoid epsilon hydroxylase
12 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
13 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
14 Sobic.010G188600 stromal membrane-associated protein, putative, expressed K12486: stromal membrane-associated protein
15 Sobic.002G401000 uncharacterized UPF0114 domain containing protein, expressed -
16 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
17 Sobic.009G190600 oryzain alpha chain precursor, putative, expressed -
18 Sobic.002G193800 transporter family protein, putative, expressed -
19 Sobic.002G349100 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
20 Sobic.001G291900 expressed protein -


Gene co-expression network
sample Sobic010G174400 Sobic010G174400 Sobic004G011300 Sobic004G011300 Sobic010G174400--Sobic004G011300 Sobic008G114300 Sobic008G114300 Sobic010G174400--Sobic008G114300 Sobic005G084800 Sobic005G084800 Sobic010G174400--Sobic005G084800 Sobic008G130000 Sobic008G130000 Sobic010G174400--Sobic008G130000 Sobic001G168250 Sobic001G168250 Sobic010G174400--Sobic001G168250 Sobic004G055500 Sobic004G055500 Sobic010G174400--Sobic004G055500 Sobic002G304100 Sobic002G304100 Sobic010G174400--Sobic002G304100 Sobic003G160200 Sobic003G160200 Sobic010G174400--Sobic003G160200 Sobic001G531400 Sobic001G531400 Sobic010G174400--Sobic001G531400 Sobic006G106400 Sobic006G106400 Sobic004G011300--Sobic006G106400 Sobic009G148500 Sobic009G148500 Sobic004G011300--Sobic009G148500 Sobic001G495200 Sobic001G495200 Sobic004G011300--Sobic001G495200 Sobic004G336000 Sobic004G336000 Sobic004G011300--Sobic004G336000 Sobic002G181000 Sobic002G181000 Sobic004G011300--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic004G011300--Sobic002G043600 Sobic008G039600 Sobic008G039600 Sobic004G011300--Sobic008G039600 Sobic008G073100 Sobic008G073100 Sobic004G011300--Sobic008G073100 Sobic003G301300 Sobic003G301300 Sobic004G011300--Sobic003G301300 Sobic002G200900 Sobic002G200900 Sobic008G114300--Sobic002G200900 Sobic008G114300--Sobic004G055500 Sobic008G114300--Sobic002G304100 Sobic008G114300--Sobic010G174400 Sobic002G349100 Sobic002G349100 Sobic008G114300--Sobic002G349100 Sobic004G296400 Sobic004G296400 Sobic008G114300--Sobic004G296400 Sobic009G190600 Sobic009G190600 Sobic008G114300--Sobic009G190600 Sobic008G114300--Sobic004G011300 Sobic008G114300--Sobic002G043600 Sobic004G238200 Sobic004G238200 Sobic005G084800--Sobic004G238200 Sobic004G163800 Sobic004G163800 Sobic005G084800--Sobic004G163800 Sobic005G199400 Sobic005G199400 Sobic005G084800--Sobic005G199400 Sobic003G355900 Sobic003G355900 Sobic005G084800--Sobic003G355900 Sobic003G369400 Sobic003G369400 Sobic005G084800--Sobic003G369400 Sobic005G084500 Sobic005G084500 Sobic005G084800--Sobic005G084500 Sobic003G176000 Sobic003G176000 Sobic005G084800--Sobic003G176000 Sobic002G218500 Sobic002G218500 Sobic005G084800--Sobic002G218500 Sobic010G236300 Sobic010G236300 Sobic005G084800--Sobic010G236300 Sobic010G176200 Sobic010G176200 Sobic008G130000--Sobic010G176200 Sobic004G356400 Sobic004G356400 Sobic008G130000--Sobic004G356400 Sobic008G130000--Sobic003G160200 Sobic003G021100 Sobic003G021100 Sobic008G130000--Sobic003G021100 Sobic010G275700 Sobic010G275700 Sobic008G130000--Sobic010G275700 Sobic001G303200 Sobic001G303200 Sobic008G130000--Sobic001G303200 Sobic008G130000--Sobic001G168250 Sobic003G229300 Sobic003G229300 Sobic008G130000--Sobic003G229300 Sobic001G333800 Sobic001G333800 Sobic008G130000--Sobic001G333800 Sobic001G168250--Sobic003G160200 Sobic001G168250--Sobic008G130000 Sobic002G193800 Sobic002G193800 Sobic001G168250--Sobic002G193800 Sobic004G274100 Sobic004G274100 Sobic001G168250--Sobic004G274100 Sobic001G168250--Sobic010G176200 Sobic009G113800 Sobic009G113800 Sobic001G168250--Sobic009G113800 Sobic001G308200 Sobic001G308200 Sobic001G168250--Sobic001G308200 Sobic009G237100 Sobic009G237100 Sobic001G168250--Sobic009G237100 Sobic007G123500 Sobic007G123500 Sobic001G168250--Sobic007G123500 Sobic001G291900 Sobic001G291900 Sobic004G055500--Sobic001G291900 Sobic004G055500--Sobic006G106400 Sobic006G091300 Sobic006G091300 Sobic004G055500--Sobic006G091300 Sobic004G055500--Sobic001G531400 Sobic003G085000 Sobic003G085000 Sobic004G055500--Sobic003G085000 Sobic004G055500--Sobic002G304100 Sobic007G208300 Sobic007G208300 Sobic004G055500--Sobic007G208300 Sobic004G301200 Sobic004G301200 Sobic004G055500--Sobic004G301200 Sobic004G055500--Sobic004G336000 Sobic002G304100--Sobic002G043600 Sobic002G304100--Sobic006G106400 Sobic002G304100--Sobic004G011300 Sobic003G352500 Sobic003G352500 Sobic002G304100--Sobic003G352500 Sobic002G304100--Sobic004G055500 Sobic003G232700 Sobic003G232700 Sobic002G304100--Sobic003G232700 Sobic002G304100--Sobic008G039600 Sobic002G304100--Sobic001G495200 Sobic002G272100 Sobic002G272100 Sobic002G304100--Sobic002G272100 Sobic003G160200--Sobic001G168250 Sobic003G160200--Sobic010G176200 Sobic003G160200--Sobic008G130000 Sobic003G160200--Sobic007G123500 Sobic003G160200--Sobic009G113800 Sobic003G160200--Sobic002G193800 Sobic008G115900 Sobic008G115900 Sobic003G160200--Sobic008G115900 Sobic003G160200--Sobic009G237100 Sobic003G160200--Sobic004G356400 Sobic001G531400--Sobic001G291900 Sobic001G531400--Sobic003G085000 Sobic001G531400--Sobic007G208300 Sobic007G090400 Sobic007G090400 Sobic001G531400--Sobic007G090400 Sobic001G531400--Sobic004G336000 Sobic001G531400--Sobic006G106400 Sobic001G122400 Sobic001G122400 Sobic001G531400--Sobic001G122400 Sobic001G104800 Sobic001G104800 Sobic001G531400--Sobic001G104800 Sobic006G055800 Sobic006G055800 Sobic001G531400--Sobic006G055800
Octagon: transcription factors


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