Gene annotation
Transcriptome id Sobic.002G401000.1
Synonym Sb02g041590
Functional annotation uncharacterized UPF0114 domain containing protein, expressed
UniProt C5X414
Pfam PF03350
Panther DB PTHR31721 PTHR31721:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13720 : Uncharacterised protein family (UPF0114)
RAP-DB (Rice) LOC_Os07g46330.1 : uncharacterized UPF0114 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a015337 , Zm00025a048998
Brachypodium -
Barley -
Wheat TraesCS2B02G157500
Populus -


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cDNA sequences
Sobic.002G401000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
2 Sobic.005G062700 nifU, putative, expressed -
3 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
4 Sobic.001G303200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
5 Sobic.001G207800 integral membrane protein, putative, expressed -
6 Sobic.007G136200 expressed protein -
7 Sobic.006G221000 starch synthase 3(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@soluble starch synthase 3, chloroplast precursor, putative, expressed -
8 Sobic.008G130000 PPR repeat domain containing protein, putative, expressed -
9 Sobic.007G108900 APE1, putative, expressed -
10 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
11 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -
12 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
13 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
14 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
17 Sobic.002G193800 transporter family protein, putative, expressed -
18 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
19 Sobic.003G247400 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed -
20 Sobic.003G276300 zinc knuckle domain containing protein, expressed -


Gene co-expression network
sample Sobic002G401000 Sobic002G401000 Sobic004G238200 Sobic004G238200 Sobic002G401000--Sobic004G238200 Sobic005G062700 Sobic005G062700 Sobic002G401000--Sobic005G062700 Sobic004G337400 Sobic004G337400 Sobic002G401000--Sobic004G337400 Sobic001G303200 Sobic001G303200 Sobic002G401000--Sobic001G303200 Sobic001G207800 Sobic001G207800 Sobic002G401000--Sobic001G207800 Sobic007G136200 Sobic007G136200 Sobic002G401000--Sobic007G136200 Sobic006G221000 Sobic006G221000 Sobic002G401000--Sobic006G221000 Sobic008G130000 Sobic008G130000 Sobic002G401000--Sobic008G130000 Sobic007G108900 Sobic007G108900 Sobic002G401000--Sobic007G108900 Sobic003G232700 Sobic003G232700 Sobic004G238200--Sobic003G232700 Sobic004G207400 Sobic004G207400 Sobic004G238200--Sobic004G207400 Sobic001G500600 Sobic001G500600 Sobic004G238200--Sobic001G500600 Sobic005G084500 Sobic005G084500 Sobic004G238200--Sobic005G084500 Sobic001G516901 Sobic001G516901 Sobic004G238200--Sobic001G516901 Sobic002G072400 Sobic002G072400 Sobic004G238200--Sobic002G072400 Sobic007G005400 Sobic007G005400 Sobic004G238200--Sobic007G005400 Sobic006G197300 Sobic006G197300 Sobic004G238200--Sobic006G197300 Sobic006G232600 Sobic006G232600 Sobic004G238200--Sobic006G232600 Sobic009G225600 Sobic009G225600 Sobic005G062700--Sobic009G225600 Sobic001G015200 Sobic001G015200 Sobic005G062700--Sobic001G015200 Sobic002G047400 Sobic002G047400 Sobic005G062700--Sobic002G047400 Sobic005G062700--Sobic001G303200 Sobic005G062700--Sobic006G221000 Sobic001G509200 Sobic001G509200 Sobic005G062700--Sobic001G509200 Sobic005G172400 Sobic005G172400 Sobic005G062700--Sobic005G172400 Sobic005G062700--Sobic007G108900 Sobic004G305900 Sobic004G305900 Sobic005G062700--Sobic004G305900 Sobic004G337400--Sobic007G136200 Sobic001G378100 Sobic001G378100 Sobic004G337400--Sobic001G378100 Sobic004G337400--Sobic006G232600 Sobic004G019800 Sobic004G019800 Sobic004G337400--Sobic004G019800 Sobic003G077700 Sobic003G077700 Sobic004G337400--Sobic003G077700 Sobic010G002700 Sobic010G002700 Sobic004G337400--Sobic010G002700 Sobic005G106600 Sobic005G106600 Sobic004G337400--Sobic005G106600 Sobic004G337400--Sobic005G084500 Sobic010G043800 Sobic010G043800 Sobic004G337400--Sobic010G043800 Sobic001G283100 Sobic001G283100 Sobic001G303200--Sobic001G283100 Sobic002G382700 Sobic002G382700 Sobic001G303200--Sobic002G382700 Sobic001G333800 Sobic001G333800 Sobic001G303200--Sobic001G333800 Sobic001G303200--Sobic001G207800 Sobic006G102000 Sobic006G102000 Sobic001G303200--Sobic006G102000 Sobic001G303200--Sobic007G108900 Sobic001G303200--Sobic006G221000 Sobic006G090100 Sobic006G090100 Sobic001G303200--Sobic006G090100 Sobic003G094100 Sobic003G094100 Sobic001G303200--Sobic003G094100 Sobic001G207800--Sobic006G090100 Sobic001G207800--Sobic001G283100 Sobic001G207800--Sobic002G382700 Sobic001G207800--Sobic001G509200 Sobic001G077300 Sobic001G077300 Sobic001G207800--Sobic001G077300 Sobic001G207800--Sobic007G108900 Sobic009G073900 Sobic009G073900 Sobic001G207800--Sobic009G073900 Sobic003G341300 Sobic003G341300 Sobic001G207800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic001G207800--Sobic007G157300 Sobic006G158100 Sobic006G158100 Sobic007G136200--Sobic006G158100 Sobic007G136200--Sobic010G043800 Sobic001G504400 Sobic001G504400 Sobic007G136200--Sobic001G504400 Sobic007G136200--Sobic010G002700 Sobic007G103400 Sobic007G103400 Sobic007G136200--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic007G136200--Sobic001G169900 Sobic007G136200--Sobic004G337400 Sobic007G136200--Sobic007G108900 Sobic007G136200--Sobic001G378100 Sobic006G221000--Sobic007G108900 Sobic006G221000--Sobic001G283100 Sobic006G221000--Sobic001G207800 Sobic006G221000--Sobic006G090100 Sobic006G221000--Sobic001G015200 Sobic006G221000--Sobic002G047400 Sobic006G221000--Sobic001G303200 Sobic004G035900 Sobic004G035900 Sobic006G221000--Sobic004G035900 Sobic003G003450 Sobic003G003450 Sobic006G221000--Sobic003G003450 Sobic010G176200 Sobic010G176200 Sobic008G130000--Sobic010G176200 Sobic004G356400 Sobic004G356400 Sobic008G130000--Sobic004G356400 Sobic003G160200 Sobic003G160200 Sobic008G130000--Sobic003G160200 Sobic003G021100 Sobic003G021100 Sobic008G130000--Sobic003G021100 Sobic010G275700 Sobic010G275700 Sobic008G130000--Sobic010G275700 Sobic008G130000--Sobic001G303200 Sobic001G168250 Sobic001G168250 Sobic008G130000--Sobic001G168250 Sobic003G229300 Sobic003G229300 Sobic008G130000--Sobic003G229300 Sobic008G130000--Sobic001G333800 Sobic007G108900--Sobic003G094100 Sobic007G108900--Sobic001G509200 Sobic004G103300 Sobic004G103300 Sobic007G108900--Sobic004G103300 Sobic001G393300 Sobic001G393300 Sobic007G108900--Sobic001G393300 Sobic007G108900--Sobic006G102000 Sobic007G108900--Sobic001G283100 Sobic010G181300 Sobic010G181300 Sobic007G108900--Sobic010G181300 Sobic007G166300 Sobic007G166300 Sobic007G108900--Sobic007G166300 Sobic002G298800 Sobic002G298800 Sobic007G108900--Sobic002G298800
Octagon: transcription factors


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