Gene annotation
| Transcriptome id | Sobic.001G143000.1 |
|---|---|
| Synonym | ATNPR3, NPR1, Sb01g012450, NPR3, NONEXPRESSOR OF PATHOGENESIS-RELATED GENE 1 |
| Functional annotation | Phosphatase (PubMedID : 30367619) BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed |
| UniProt | C5WQB3 |
| Pfam | PF13637 PF11900 PF12313 |
| Panther DB | PTHR24413 PTHR24413:SF114 |
| NCBI CDD | KOG4214; Myotrophin and similar proteins |
| KEGG Orthology | K14508; regulatory protein NPR1 |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G45110 : NPR1-like protein 3 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g46440.1 : BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed |
| MaizeGDB (Corn) | Zm00025a009178 |
| Brachypodium | KQK13849 , KQK13848 , KQK13847 |
| Barley | HORVU4Hr1G003040.2 , HORVU4Hr1G003040.1 |
| Wheat | TraesCS4D02G017500 , TraesCS4B02G018900 , TraesCS4B02G018900 , TraesCS4A02G294400 |
| Populus | - |
JBrowse
| Sobic.001G143000 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G261300 | adenylate kinase, putative, expressed | K00939: adk, adenylate kinase |
| 2 | Sobic.005G142700 | heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed | - |
| 3 | Sobic.003G157900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycine-rich protein, putative, expressed | - |
| 4 | Sobic.009G187400 | heat shock protein, putative, expressed | - |
| 5 | Sobic.008G089900 | PQ loop repeat domain containing protein, expressed | K12386: cystinosin |
| 6 | Sobic.002G290400 | Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed | - |
| 7 | Sobic.009G258100 | early-responsive to dehydration protein-related, putative, expressed | - |
| 8 | Sobic.003G141000 | protein phosphatase 2C, putative, expressed | K14803: protein phosphatase PTC2/3 |
| 9 | Sobic.003G373600 | -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed | K00600: glyA, glycine hydroxymethyltransferase |
| 10 | Sobic.008G077600 | diacylglycerol kinase 1, putative, expressed | K00901: dgkA, diacylglycerol kinase (ATP) |
| 11 | Sobic.010G230500 | expressed protein | - |
| 12 | Sobic.002G204200 | ubiquitin family protein, putative, expressed | K12158: ubiquitin-like protein Nedd8 |
| 13 | Sobic.007G044300 | similar to Os08g0155400 protein(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 14 | Sobic.001G414500 | ankyrin repeat-containing protein, putative, expressed | - |
| 15 | Sobic.002G001000 | transmembrane amino acid transporter protein, putative, expressed | - |
| 16 | Sobic.003G224100 | "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed | K14487: auxin responsive GH3 gene family |
| 17 | Sobic.002G408300 | OsFBT11 - F-box and tubby domain containing protein, expressed | - |
| 18 | Sobic.007G090900 | heat shock protein-related, putative, expressed | - |
| 19 | Sobic.004G163200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed | K09419: heat shock transcription factor, other eukaryote |
| 20 | Sobic.010G232100 | Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed | K08770: ubiquitin C K08770: ubiquitin C K04551: ubiquitin B |
Gene co-expression network
Octagon: transcription factors
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