Gene annotation
Transcriptome id Sobic.004G097200.1
Synonym Sb04g008000
Functional annotation Mpv17 / PMP22 family domain containing protein, expressed
UniProt C5XYG8
Pfam PF04117
Panther DB PTHR11266 PTHR11266:SF15
NCBI CDD KOG1944; Peroxisomal membrane protein MPV17 and related proteins
KEGG Orthology K13347; PXMP2, peroxisomal membrane protein 2
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G14305 : Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
RAP-DB (Rice) LOC_Os02g13270.1 : Mpv17 / PMP22 family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020138
Brachypodium KQJ94097
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G097200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G324100 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
2 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
3 Sobic.002G280100 MCM10 - Putative minichromosome maintenance MCM protein 10, expressed K10736: minichromosome maintenance protein 10
4 Sobic.005G004500 ferritin-1, chloroplast precursor, putative, expressed K00522: ferritin heavy chain
5 Sobic.010G062500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
6 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
7 Sobic.001G309900 transporter, major facilitator family, putative, expressed -
8 Sobic.004G305900 heat shock protein DnaJ, putative, expressed -
9 Sobic.001G352200 heavy metal-associated domain containing protein, expressed -
10 Sobic.002G230600 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
11 Sobic.009G123300 NAD dependent epimerase/dehydratase family protein, putative, expressed K06118: SQD1, UDP-sulfoquinovose synthase
12 Sobic.008G006200 macrophage migration inhibitory factor, putative, expressed -
13 Sobic.004G154800 expressed protein -
14 Sobic.004G269800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
15 Sobic.001G057100 plant-specific domain TIGR01615 family protein, expressed -
16 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
17 Sobic.008G116000 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
18 Sobic.001G220000 PPR repeat containing protein, expressed -
19 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
20 Sobic.003G157900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycine-rich protein, putative, expressed -


Gene co-expression network
sample Sobic004G097200 Sobic004G097200 Sobic004G324100 Sobic004G324100 Sobic004G097200--Sobic004G324100 Sobic002G279700 Sobic002G279700 Sobic004G097200--Sobic002G279700 Sobic002G280100 Sobic002G280100 Sobic004G097200--Sobic002G280100 Sobic005G004500 Sobic005G004500 Sobic004G097200--Sobic005G004500 Sobic010G062500 Sobic010G062500 Sobic004G097200--Sobic010G062500 Sobic003G373600 Sobic003G373600 Sobic004G097200--Sobic003G373600 Sobic001G309900 Sobic001G309900 Sobic004G097200--Sobic001G309900 Sobic004G305900 Sobic004G305900 Sobic004G097200--Sobic004G305900 Sobic001G352200 Sobic001G352200 Sobic004G097200--Sobic001G352200 Sobic006G155500 Sobic006G155500 Sobic004G324100--Sobic006G155500 Sobic009G141400 Sobic009G141400 Sobic004G324100--Sobic009G141400 Sobic001G118400 Sobic001G118400 Sobic004G324100--Sobic001G118400 Sobic003G328100 Sobic003G328100 Sobic004G324100--Sobic003G328100 Sobic006G140700 Sobic006G140700 Sobic004G324100--Sobic006G140700 Sobic008G037800 Sobic008G037800 Sobic004G324100--Sobic008G037800 Sobic004G281900 Sobic004G281900 Sobic004G324100--Sobic004G281900 Sobic006G026100 Sobic006G026100 Sobic004G324100--Sobic006G026100 Sobic001G286600 Sobic001G286600 Sobic004G324100--Sobic001G286600 Sobic002G128900 Sobic002G128900 Sobic002G279700--Sobic002G128900 Sobic006G261700 Sobic006G261700 Sobic002G279700--Sobic006G261700 Sobic001G295300 Sobic001G295300 Sobic002G279700--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G279700--Sobic002G200900 Sobic002G233700 Sobic002G233700 Sobic002G279700--Sobic002G233700 Sobic008G188600 Sobic008G188600 Sobic002G279700--Sobic008G188600 Sobic001G020100 Sobic001G020100 Sobic002G279700--Sobic001G020100 Sobic008G006200 Sobic008G006200 Sobic002G279700--Sobic008G006200 Sobic004G307400 Sobic004G307400 Sobic002G279700--Sobic004G307400 Sobic002G280100--Sobic004G097200 Sobic002G408000 Sobic002G408000 Sobic002G280100--Sobic002G408000 Sobic003G288800 Sobic003G288800 Sobic002G280100--Sobic003G288800 Sobic007G016600 Sobic007G016600 Sobic002G280100--Sobic007G016600 Sobic009G200200 Sobic009G200200 Sobic002G280100--Sobic009G200200 Sobic004G268400 Sobic004G268400 Sobic002G280100--Sobic004G268400 Sobic001G411200 Sobic001G411200 Sobic002G280100--Sobic001G411200 Sobic004G267700 Sobic004G267700 Sobic002G280100--Sobic004G267700 Sobic010G207100 Sobic010G207100 Sobic002G280100--Sobic010G207100 Sobic005G004500--Sobic002G200900 Sobic006G108200 Sobic006G108200 Sobic005G004500--Sobic006G108200 Sobic004G154800 Sobic004G154800 Sobic005G004500--Sobic004G154800 Sobic004G055000 Sobic004G055000 Sobic005G004500--Sobic004G055000 Sobic005G004500--Sobic001G352200 Sobic005G134100 Sobic005G134100 Sobic005G004500--Sobic005G134100 Sobic004G028300 Sobic004G028300 Sobic005G004500--Sobic004G028300 Sobic001G167900 Sobic001G167900 Sobic005G004500--Sobic001G167900 Sobic002G351600 Sobic002G351600 Sobic005G004500--Sobic002G351600 Sobic010G062500--Sobic004G154800 Sobic004G252500 Sobic004G252500 Sobic010G062500--Sobic004G252500 Sobic010G062500--Sobic008G037800 Sobic004G165900 Sobic004G165900 Sobic010G062500--Sobic004G165900 Sobic002G230600 Sobic002G230600 Sobic010G062500--Sobic002G230600 Sobic006G025400 Sobic006G025400 Sobic010G062500--Sobic006G025400 Sobic010G062500--Sobic010G207100 Sobic004G300100 Sobic004G300100 Sobic010G062500--Sobic004G300100 Sobic004G124400 Sobic004G124400 Sobic010G062500--Sobic004G124400 Sobic003G157900 Sobic003G157900 Sobic003G373600--Sobic003G157900 Sobic005G062700 Sobic005G062700 Sobic003G373600--Sobic005G062700 Sobic003G425300 Sobic003G425300 Sobic003G373600--Sobic003G425300 Sobic003G381700 Sobic003G381700 Sobic003G373600--Sobic003G381700 Sobic005G172400 Sobic005G172400 Sobic003G373600--Sobic005G172400 Sobic001G276300 Sobic001G276300 Sobic003G373600--Sobic001G276300 Sobic007G079400 Sobic007G079400 Sobic003G373600--Sobic007G079400 Sobic008G077500 Sobic008G077500 Sobic003G373600--Sobic008G077500 Sobic008G187100 Sobic008G187100 Sobic003G373600--Sobic008G187100 Sobic006G020300 Sobic006G020300 Sobic001G309900--Sobic006G020300 Sobic003G175800 Sobic003G175800 Sobic001G309900--Sobic003G175800 Sobic010G101000 Sobic010G101000 Sobic001G309900--Sobic010G101000 Sobic001G018000 Sobic001G018000 Sobic001G309900--Sobic001G018000 Sobic002G030900 Sobic002G030900 Sobic001G309900--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic001G309900--Sobic001G104700 Sobic001G309900--Sobic004G267700 Sobic008G088821 Sobic008G088821 Sobic001G309900--Sobic008G088821 Sobic009G225600 Sobic009G225600 Sobic001G309900--Sobic009G225600 Sobic001G015200 Sobic001G015200 Sobic004G305900--Sobic001G015200 Sobic004G305900--Sobic008G088821 Sobic003G103300 Sobic003G103300 Sobic004G305900--Sobic003G103300 Sobic005G028800 Sobic005G028800 Sobic004G305900--Sobic005G028800 Sobic006G140500 Sobic006G140500 Sobic004G305900--Sobic006G140500 Sobic004G305900--Sobic001G167900 Sobic007G166300 Sobic007G166300 Sobic004G305900--Sobic007G166300 Sobic004G305900--Sobic010G101000 Sobic004G305900--Sobic004G028300 Sobic001G352200--Sobic004G305900 Sobic003G428600 Sobic003G428600 Sobic001G352200--Sobic003G428600 Sobic001G352200--Sobic008G088821 Sobic001G352200--Sobic001G167900 Sobic001G352200--Sobic006G140500 Sobic001G352200--Sobic003G103300 Sobic001G352200--Sobic004G268400 Sobic001G352200--Sobic004G028300 Sobic001G352200--Sobic001G018000
Octagon: transcription factors


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