Gene annotation
Transcriptome id Sobic.001G309900.2,Sobic.001G309900.1,Sobic.001G309900.3
Synonym Sb01g030220
Functional annotation transporter, major facilitator family, putative, expressed
UniProt C5WTI5
Pfam PF07690
Panther DB PTHR23504 PTHR23504:SF10
NCBI CDD KOG2816; Predicted transporter ADD1 (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G16990 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os11g05390.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a003219
Brachypodium KQJ97642 , KQJ97643 , PNT67818 , PNT67819
Barley HORVU1Hr1G052530.34 , HORVU1Hr1G052530.35 , HORVU1Hr1G052530.30 , HORVU1Hr1G052530.31 , HORVU1Hr1G052530.32 , HORVU1Hr1G052530.33 , HORVU1Hr1G052530.5 , HORVU1Hr1G052530.29 , HORVU1Hr1G052530.27 , HORVU1Hr1G052530.26 , HORVU1Hr1G052530.25 , HORVU1Hr1G052530.24 , HORVU1Hr1G052530.23 , HORVU1Hr1G052530.22 , HORVU1Hr1G052530.21 , HORVU1Hr1G052530.20 , HORVU1Hr1G052530.17 , HORVU1Hr1G052530.14 , HORVU1Hr1G052530.15 , HORVU1Hr1G052530.12 , HORVU1Hr1G052530.13 , HORVU1Hr1G052530.11 , HORVU1Hr1G052530.18
Wheat TraesCS1A02G204300 , TraesCS1B02G217900 , TraesCS1D02G207600 , TraesCS1D02G207600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
2 Sobic.003G175800 - -
3 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
4 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
5 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.001G104700 expressed protein -
7 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
9 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
10 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
11 Sobic.005G002400 expressed protein -
12 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
13 Sobic.007G016600 expressed protein -
14 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
15 Sobic.008G002400 expressed protein -
16 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
17 Sobic.001G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
18 Sobic.009G119300 peptide chain release factor 2, putative, expressed -
19 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
20 Sobic.008G180800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase


Gene co-expression network
sample Sobic001G309900 Sobic001G309900 Sobic006G020300 Sobic006G020300 Sobic001G309900--Sobic006G020300 Sobic003G175800 Sobic003G175800 Sobic001G309900--Sobic003G175800 Sobic010G101000 Sobic010G101000 Sobic001G309900--Sobic010G101000 Sobic001G018000 Sobic001G018000 Sobic001G309900--Sobic001G018000 Sobic002G030900 Sobic002G030900 Sobic001G309900--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic001G309900--Sobic001G104700 Sobic004G267700 Sobic004G267700 Sobic001G309900--Sobic004G267700 Sobic008G088821 Sobic008G088821 Sobic001G309900--Sobic008G088821 Sobic009G225600 Sobic009G225600 Sobic001G309900--Sobic009G225600 Sobic001G434000 Sobic001G434000 Sobic006G020300--Sobic001G434000 Sobic005G002400 Sobic005G002400 Sobic006G020300--Sobic005G002400 Sobic002G052100 Sobic002G052100 Sobic006G020300--Sobic002G052100 Sobic003G154400 Sobic003G154400 Sobic006G020300--Sobic003G154400 Sobic006G020300--Sobic003G175800 Sobic003G326000 Sobic003G326000 Sobic006G020300--Sobic003G326000 Sobic004G214800 Sobic004G214800 Sobic006G020300--Sobic004G214800 Sobic010G104700 Sobic010G104700 Sobic006G020300--Sobic010G104700 Sobic001G181100 Sobic001G181100 Sobic006G020300--Sobic001G181100 Sobic003G175800--Sobic002G052100 Sobic003G175800--Sobic006G020300 Sobic003G175800--Sobic001G181100 Sobic003G175800--Sobic005G002400 Sobic003G175800--Sobic003G154400 Sobic002G052000 Sobic002G052000 Sobic003G175800--Sobic002G052000 Sobic008G002400 Sobic008G002400 Sobic003G175800--Sobic008G002400 Sobic001G181000 Sobic001G181000 Sobic003G175800--Sobic001G181000 Sobic003G175800--Sobic004G214800 Sobic010G101000--Sobic004G267700 Sobic010G101000--Sobic009G225600 Sobic010G101000--Sobic002G030900 Sobic003G186800 Sobic003G186800 Sobic010G101000--Sobic003G186800 Sobic002G351200 Sobic002G351200 Sobic010G101000--Sobic002G351200 Sobic010G101000--Sobic001G018000 Sobic010G101000--Sobic010G104700 Sobic004G268400 Sobic004G268400 Sobic010G101000--Sobic004G268400 Sobic003G304300 Sobic003G304300 Sobic010G101000--Sobic003G304300 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic007G016600 Sobic007G016600 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G018000--Sobic001G411100 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic002G030900--Sobic010G101000 Sobic002G030900--Sobic001G411100 Sobic002G030900--Sobic001G018000 Sobic002G030900--Sobic004G268400 Sobic002G030900--Sobic001G104700 Sobic002G030900--Sobic004G267700 Sobic002G030900--Sobic003G186800 Sobic007G124500 Sobic007G124500 Sobic002G030900--Sobic007G124500 Sobic002G030900--Sobic008G088821 Sobic001G104700--Sobic001G411100 Sobic001G104700--Sobic002G030900 Sobic001G104600 Sobic001G104600 Sobic001G104700--Sobic001G104600 Sobic003G103300 Sobic003G103300 Sobic001G104700--Sobic003G103300 Sobic001G104700--Sobic001G018000 Sobic001G104700--Sobic010G101000 Sobic004G125800 Sobic004G125800 Sobic001G104700--Sobic004G125800 Sobic001G104700--Sobic004G268400 Sobic001G104700--Sobic004G267700 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic004G267700--Sobic007G016600 Sobic003G380200 Sobic003G380200 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic004G267700--Sobic010G100900 Sobic001G015200 Sobic001G015200 Sobic008G088821--Sobic001G015200 Sobic006G140500 Sobic006G140500 Sobic008G088821--Sobic006G140500 Sobic004G028300 Sobic004G028300 Sobic008G088821--Sobic004G028300 Sobic009G119300 Sobic009G119300 Sobic008G088821--Sobic009G119300 Sobic008G088821--Sobic003G103300 Sobic008G088821--Sobic001G018000 Sobic008G088821--Sobic004G268400 Sobic008G088821--Sobic010G101000 Sobic008G088821--Sobic002G030900 Sobic001G046000 Sobic001G046000 Sobic009G225600--Sobic001G046000 Sobic009G225600--Sobic010G101000 Sobic009G225600--Sobic003G186800 Sobic002G047400 Sobic002G047400 Sobic009G225600--Sobic002G047400 Sobic001G485100 Sobic001G485100 Sobic009G225600--Sobic001G485100 Sobic009G225600--Sobic010G104700 Sobic009G225600--Sobic002G351200 Sobic009G225600--Sobic001G015200 Sobic009G225600--Sobic003G380200
Octagon: transcription factors


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