Gene annotation
Transcriptome id Sobic.002G280100.1
Synonym MCM10, Sb02g031270
Functional annotation MCM10 - Putative minichromosome maintenance MCM protein 10, expressed
UniProt C5X6W0
Pfam PF09329
Panther DB PTHR13454
NCBI CDD -
KEGG Orthology K10736; minichromosome maintenance protein 10
Gene Ontology GO:0006260; DNA replication GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT2G20980 : minichromosome maintenance 10
RAP-DB (Rice) LOC_Os09g36820.1 : MCM10 - Putative minichromosome maintenance MCM protein 10, expressed
MaizeGDB (Corn) Zm00025a049319
Brachypodium KQJ91246 , KQJ91245
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G097200 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
2 Sobic.002G408000 KIP1, putative, expressed -
3 Sobic.003G288800 phosphoesterase, putative, expressed K08073: bifunctional polynucleotide phosphatase/kinase
4 Sobic.007G016600 expressed protein -
5 Sobic.009G200200 "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]"(PubMedID : 26186930)@Trehalose-6-phosphate synthase(PubMedID : 26320239)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
6 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
7 Sobic.001G411200 cat eye syndrome critical region protein 5 precursor, putative, expressed -
8 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
10 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.003G304300 expressed protein -
12 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
13 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
14 Sobic.002G213400 expressed protein -
15 Sobic.001G411100 expressed protein -
16 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
17 Sobic.009G004100 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
18 Sobic.006G226601 - -
19 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
20 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -


Gene co-expression network
sample Sobic002G280100 Sobic002G280100 Sobic004G097200 Sobic004G097200 Sobic002G280100--Sobic004G097200 Sobic002G408000 Sobic002G408000 Sobic002G280100--Sobic002G408000 Sobic003G288800 Sobic003G288800 Sobic002G280100--Sobic003G288800 Sobic007G016600 Sobic007G016600 Sobic002G280100--Sobic007G016600 Sobic009G200200 Sobic009G200200 Sobic002G280100--Sobic009G200200 Sobic004G268400 Sobic004G268400 Sobic002G280100--Sobic004G268400 Sobic001G411200 Sobic001G411200 Sobic002G280100--Sobic001G411200 Sobic004G267700 Sobic004G267700 Sobic002G280100--Sobic004G267700 Sobic010G207100 Sobic010G207100 Sobic002G280100--Sobic010G207100 Sobic004G324100 Sobic004G324100 Sobic004G097200--Sobic004G324100 Sobic002G279700 Sobic002G279700 Sobic004G097200--Sobic002G279700 Sobic004G097200--Sobic002G280100 Sobic005G004500 Sobic005G004500 Sobic004G097200--Sobic005G004500 Sobic010G062500 Sobic010G062500 Sobic004G097200--Sobic010G062500 Sobic003G373600 Sobic003G373600 Sobic004G097200--Sobic003G373600 Sobic001G309900 Sobic001G309900 Sobic004G097200--Sobic001G309900 Sobic004G305900 Sobic004G305900 Sobic004G097200--Sobic004G305900 Sobic001G352200 Sobic001G352200 Sobic004G097200--Sobic001G352200 Sobic002G132400 Sobic002G132400 Sobic002G408000--Sobic002G132400 Sobic002G351200 Sobic002G351200 Sobic002G408000--Sobic002G351200 Sobic010G100900 Sobic010G100900 Sobic002G408000--Sobic010G100900 Sobic002G408000--Sobic004G267700 Sobic006G191500 Sobic006G191500 Sobic002G408000--Sobic006G191500 Sobic009G246400 Sobic009G246400 Sobic002G408000--Sobic009G246400 Sobic003G380200 Sobic003G380200 Sobic002G408000--Sobic003G380200 Sobic003G304300 Sobic003G304300 Sobic002G408000--Sobic003G304300 Sobic002G408000--Sobic004G268400 Sobic005G132000 Sobic005G132000 Sobic003G288800--Sobic005G132000 Sobic002G296500 Sobic002G296500 Sobic003G288800--Sobic002G296500 Sobic004G271600 Sobic004G271600 Sobic003G288800--Sobic004G271600 Sobic002G213400 Sobic002G213400 Sobic003G288800--Sobic002G213400 Sobic009G259100 Sobic009G259100 Sobic003G288800--Sobic009G259100 Sobic006G120301 Sobic006G120301 Sobic003G288800--Sobic006G120301 Sobic005G201000 Sobic005G201000 Sobic003G288800--Sobic005G201000 Sobic002G294400 Sobic002G294400 Sobic003G288800--Sobic002G294400 Sobic001G492600 Sobic001G492600 Sobic003G288800--Sobic001G492600 Sobic007G016600--Sobic004G268400 Sobic007G016600--Sobic004G267700 Sobic001G018000 Sobic001G018000 Sobic007G016600--Sobic001G018000 Sobic007G016600--Sobic003G304300 Sobic007G016600--Sobic002G351200 Sobic007G016600--Sobic010G100900 Sobic007G016600--Sobic010G207100 Sobic003G186800 Sobic003G186800 Sobic007G016600--Sobic003G186800 Sobic007G016600--Sobic003G380200 Sobic001G104700 Sobic001G104700 Sobic009G200200--Sobic001G104700 Sobic006G020300 Sobic006G020300 Sobic009G200200--Sobic006G020300 Sobic005G002400 Sobic005G002400 Sobic009G200200--Sobic005G002400 Sobic003G426900 Sobic003G426900 Sobic009G200200--Sobic003G426900 Sobic008G002400 Sobic008G002400 Sobic009G200200--Sobic008G002400 Sobic009G200200--Sobic001G309900 Sobic004G125800 Sobic004G125800 Sobic009G200200--Sobic004G125800 Sobic009G200200--Sobic001G018000 Sobic003G175800 Sobic003G175800 Sobic009G200200--Sobic003G175800 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic004G268400--Sobic010G100900 Sobic010G101000 Sobic010G101000 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200 Sobic002G407000 Sobic002G407000 Sobic001G411200--Sobic002G407000 Sobic004G151800 Sobic004G151800 Sobic001G411200--Sobic004G151800 Sobic004G151300 Sobic004G151300 Sobic001G411200--Sobic004G151300 Sobic001G345100 Sobic001G345100 Sobic001G411200--Sobic001G345100 Sobic003G150500 Sobic003G150500 Sobic001G411200--Sobic003G150500 Sobic002G252300 Sobic002G252300 Sobic001G411200--Sobic002G252300 Sobic010G150100 Sobic010G150100 Sobic001G411200--Sobic010G150100 Sobic010G134000 Sobic010G134000 Sobic001G411200--Sobic010G134000 Sobic004G143300 Sobic004G143300 Sobic001G411200--Sobic004G143300 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic004G267700--Sobic007G016600 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic004G267700--Sobic010G100900 Sobic010G207100--Sobic007G016600 Sobic010G207100--Sobic002G213400 Sobic010G207100--Sobic002G351200 Sobic010G207100--Sobic001G018000 Sobic001G411100 Sobic001G411100 Sobic010G207100--Sobic001G411100 Sobic007G124500 Sobic007G124500 Sobic010G207100--Sobic007G124500 Sobic010G207100--Sobic004G268400 Sobic010G207100--Sobic010G100900 Sobic002G356900 Sobic002G356900 Sobic010G207100--Sobic002G356900
Octagon: transcription factors


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