Gene annotation
Transcriptome id Sobic.003G288800.2,Sobic.003G288800.3,Sobic.003G288800.1
Synonym Sb03g033940
Functional annotation phosphoesterase, putative, expressed
UniProt A0A1W0VZE5 , A0A1W0VZC7 , A0A1W0VZC1
Pfam PF00645 PF08645 PF08645 PF00645
Panther DB PTHR12083 PTHR12083:SF6
NCBI CDD -
KEGG Orthology K08073; bifunctional polynucleotide phosphatase/kinase
Gene Ontology GO:0008270; zinc ion binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G14890 : phosphoesterase
RAP-DB (Rice) LOC_Os01g53560.1 : phosphoesterase, putative, expressed
MaizeGDB (Corn) Zm00025a027680
Brachypodium PNT72797
Barley HORVU3Hr1G069980.20 , HORVU3Hr1G069980.19 , HORVU3Hr1G069980.18 , HORVU3Hr1G069980.11 , HORVU3Hr1G069980.10 , HORVU3Hr1G069980.13 , HORVU3Hr1G069980.12 , HORVU3Hr1G069980.15 , HORVU3Hr1G069980.14 , HORVU3Hr1G069980.17 , HORVU3Hr1G069980.16 , HORVU3Hr1G069980.9 , HORVU3Hr1G069980.8 , HORVU3Hr1G069980.5 , HORVU3Hr1G069980.4 , HORVU3Hr1G069980.7 , HORVU3Hr1G069980.6 , HORVU3Hr1G069980.1 , HORVU3Hr1G069980.3 , HORVU3Hr1G069980.2
Wheat TraesCS3A02G278700 , TraesCS3B02G312900 , TraesCS3B02G312900 , TraesCS3B02G312900 , TraesCS3A02G278700 , TraesCS3A02G278700 , TraesCS3A02G278700 , TraesCS3D02G279000 , TraesCS3D02G279000 , TraesCS3D02G279000 , TraesCS3D02G279000 , TraesCS3D02G279000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
2 Sobic.002G296500 dihydroneopterin aldolase, putative, expressed K01633: 7,8-dihydroneopterin aldolase/epimerase/oxygenase
3 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
4 Sobic.002G213400 expressed protein -
5 Sobic.009G259100 CCT motif family protein, expressed -
6 Sobic.006G120301 - -
7 Sobic.005G201000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
8 Sobic.002G294400 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
9 Sobic.001G492600 VQ domain containing protein, putative, expressed -
10 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
11 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
12 Sobic.003G426900 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
13 Sobic.002G081400 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
14 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.009G040400 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
16 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
17 Sobic.004G143300 high mobility group, putative, expressed -
18 Sobic.004G317700 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
19 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
20 Sobic.007G124500 methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G288800 Sobic003G288800 Sobic005G132000 Sobic005G132000 Sobic003G288800--Sobic005G132000 Sobic002G296500 Sobic002G296500 Sobic003G288800--Sobic002G296500 Sobic004G271600 Sobic004G271600 Sobic003G288800--Sobic004G271600 Sobic002G213400 Sobic002G213400 Sobic003G288800--Sobic002G213400 Sobic009G259100 Sobic009G259100 Sobic003G288800--Sobic009G259100 Sobic006G120301 Sobic006G120301 Sobic003G288800--Sobic006G120301 Sobic005G201000 Sobic005G201000 Sobic003G288800--Sobic005G201000 Sobic002G294400 Sobic002G294400 Sobic003G288800--Sobic002G294400 Sobic001G492600 Sobic001G492600 Sobic003G288800--Sobic001G492600 Sobic003G029500 Sobic003G029500 Sobic005G132000--Sobic003G029500 Sobic005G132000--Sobic005G201000 Sobic005G132000--Sobic009G259100 Sobic009G040400 Sobic009G040400 Sobic005G132000--Sobic009G040400 Sobic007G010800 Sobic007G010800 Sobic005G132000--Sobic007G010800 Sobic007G146400 Sobic007G146400 Sobic005G132000--Sobic007G146400 Sobic010G132600 Sobic010G132600 Sobic005G132000--Sobic010G132600 Sobic002G295100 Sobic002G295100 Sobic005G132000--Sobic002G295100 Sobic003G003450 Sobic003G003450 Sobic005G132000--Sobic003G003450 Sobic002G296500--Sobic003G288800 Sobic010G113200 Sobic010G113200 Sobic002G296500--Sobic010G113200 Sobic004G338000 Sobic004G338000 Sobic002G296500--Sobic004G338000 Sobic002G171101 Sobic002G171101 Sobic002G296500--Sobic002G171101 Sobic010G223200 Sobic010G223200 Sobic002G296500--Sobic010G223200 Sobic003G348000 Sobic003G348000 Sobic002G296500--Sobic003G348000 Sobic002G296500--Sobic009G259100 Sobic010G178401 Sobic010G178401 Sobic002G296500--Sobic010G178401 Sobic002G161400 Sobic002G161400 Sobic002G296500--Sobic002G161400 Sobic002G132400 Sobic002G132400 Sobic004G271600--Sobic002G132400 Sobic002G081400 Sobic002G081400 Sobic004G271600--Sobic002G081400 Sobic010G100900 Sobic010G100900 Sobic004G271600--Sobic010G100900 Sobic002G351200 Sobic002G351200 Sobic004G271600--Sobic002G351200 Sobic007G124500 Sobic007G124500 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic006G090100 Sobic006G090100 Sobic004G271600--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic004G271600--Sobic001G509200 Sobic002G060800 Sobic002G060800 Sobic004G271600--Sobic002G060800 Sobic002G213400--Sobic002G351200 Sobic010G207100 Sobic010G207100 Sobic002G213400--Sobic010G207100 Sobic001G018000 Sobic001G018000 Sobic002G213400--Sobic001G018000 Sobic007G016600 Sobic007G016600 Sobic002G213400--Sobic007G016600 Sobic001G434000 Sobic001G434000 Sobic002G213400--Sobic001G434000 Sobic002G213400--Sobic010G100900 Sobic004G268400 Sobic004G268400 Sobic002G213400--Sobic004G268400 Sobic002G213400--Sobic007G124500 Sobic003G304300 Sobic003G304300 Sobic002G213400--Sobic003G304300 Sobic002G275100 Sobic002G275100 Sobic009G259100--Sobic002G275100 Sobic003G380200 Sobic003G380200 Sobic009G259100--Sobic003G380200 Sobic004G344600 Sobic004G344600 Sobic009G259100--Sobic004G344600 Sobic004G267700 Sobic004G267700 Sobic009G259100--Sobic004G267700 Sobic009G259100--Sobic010G100900 Sobic009G259100--Sobic003G304300 Sobic007G121300 Sobic007G121300 Sobic009G259100--Sobic007G121300 Sobic009G259100--Sobic002G351200 Sobic009G259100--Sobic002G161400 Sobic003G080100 Sobic003G080100 Sobic006G120301--Sobic003G080100 Sobic006G120301--Sobic002G213400 Sobic006G120301--Sobic010G113200 Sobic006G120301--Sobic001G492600 Sobic006G120301--Sobic002G351200 Sobic003G426900 Sobic003G426900 Sobic006G120301--Sobic003G426900 Sobic004G217500 Sobic004G217500 Sobic006G120301--Sobic004G217500 Sobic006G120301--Sobic001G434000 Sobic006G120301--Sobic010G100900 Sobic005G201000--Sobic003G029500 Sobic005G201000--Sobic005G132000 Sobic005G201000--Sobic009G040400 Sobic006G051800 Sobic006G051800 Sobic005G201000--Sobic006G051800 Sobic005G201000--Sobic007G010800 Sobic010G150100 Sobic010G150100 Sobic005G201000--Sobic010G150100 Sobic010G092350 Sobic010G092350 Sobic005G201000--Sobic010G092350 Sobic003G057233 Sobic003G057233 Sobic005G201000--Sobic003G057233 Sobic001G298900 Sobic001G298900 Sobic005G201000--Sobic001G298900 Sobic001G410000 Sobic001G410000 Sobic002G294400--Sobic001G410000 Sobic001G436400 Sobic001G436400 Sobic002G294400--Sobic001G436400 Sobic002G294400--Sobic002G081400 Sobic002G294400--Sobic004G271600 Sobic002G294400--Sobic003G288800 Sobic002G085100 Sobic002G085100 Sobic002G294400--Sobic002G085100 Sobic004G207400 Sobic004G207400 Sobic002G294400--Sobic004G207400 Sobic003G340600 Sobic003G340600 Sobic002G294400--Sobic003G340600 Sobic004G317700 Sobic004G317700 Sobic002G294400--Sobic004G317700 Sobic001G492600--Sobic003G080100 Sobic006G036300 Sobic006G036300 Sobic001G492600--Sobic006G036300 Sobic001G492600--Sobic004G271600 Sobic003G012400 Sobic003G012400 Sobic001G492600--Sobic003G012400 Sobic001G492600--Sobic002G132400 Sobic001G492600--Sobic006G120301 Sobic001G492600--Sobic002G213400 Sobic001G492600--Sobic002G351200 Sobic005G093800 Sobic005G093800 Sobic001G492600--Sobic005G093800
Octagon: transcription factors


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