Gene annotation
Transcriptome id Sobic.009G200200.1
Synonym Sb09g025790,TPS1, TPS1, ATTPS1
Functional annotation "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]" (PubMedID : 26186930)
Trehalose-6-phosphate synthase (PubMedID : 26320239)
trehalose-6-phosphate synthase, putative, expressed
UniProt C5Z1A2
Pfam PF02358 PF00982
Panther DB PTHR10788 PTHR10788:SF6
NCBI CDD -
KEGG Orthology K16055; trehalose 6-phosphate synthase/phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G78580 : trehalose-6-phosphate synthase
RAP-DB (Rice) LOC_Os05g44210.1 : trehalose-6-phosphate synthase, putative, expressed
MaizeGDB (Corn) Zm00025a023290 , Zm00025a044244 , Zm00025a037955
Brachypodium KQK05360 , KQK05359
Barley HORVU1Hr1G076350.18 , HORVU1Hr1G076350.19 , HORVU1Hr1G076350.14 , HORVU1Hr1G076350.15 , HORVU1Hr1G076350.16 , HORVU1Hr1G076350.17 , HORVU1Hr1G076350.10 , HORVU1Hr1G076350.11 , HORVU1Hr1G076350.12 , HORVU1Hr1G076350.13 , HORVU1Hr1G076350.6 , HORVU1Hr1G076350.7 , HORVU1Hr1G076350.4 , HORVU1Hr1G076350.5 , HORVU1Hr1G076350.2 , HORVU1Hr1G076350.3 , HORVU1Hr1G076350.1 , HORVU1Hr1G076350.8 , HORVU1Hr1G076350.9 , HORVU1Hr1G076350.21 , HORVU1Hr1G076350.20 , HORVU1Hr1G076350.23 , HORVU1Hr1G076350.22 , HORVU1Hr1G076350.24
Wheat TraesCS1B02G351600 , TraesCS1B02G351600 , TraesCS1B02G351600 , TraesCS1B02G351600 , TraesCS1D02G341100 , TraesCS1D02G341100 , TraesCS1D02G341100 , TraesCS1A02G339300
Populus PNT12737 , PNT12738


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cDNA sequences
Sobic.009G200200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G104700 expressed protein -
2 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
3 Sobic.005G002400 expressed protein -
4 Sobic.003G426900 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
5 Sobic.008G002400 expressed protein -
6 Sobic.001G309900 transporter, major facilitator family, putative, expressed -
7 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
8 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
9 Sobic.003G175800 - -
10 Sobic.007G016600 expressed protein -
11 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
13 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
15 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
16 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
17 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
18 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
19 Sobic.009G259100 CCT motif family protein, expressed -
20 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -


Gene co-expression network
sample Sobic009G200200 Sobic009G200200 Sobic001G104700 Sobic001G104700 Sobic009G200200--Sobic001G104700 Sobic006G020300 Sobic006G020300 Sobic009G200200--Sobic006G020300 Sobic005G002400 Sobic005G002400 Sobic009G200200--Sobic005G002400 Sobic003G426900 Sobic003G426900 Sobic009G200200--Sobic003G426900 Sobic008G002400 Sobic008G002400 Sobic009G200200--Sobic008G002400 Sobic001G309900 Sobic001G309900 Sobic009G200200--Sobic001G309900 Sobic004G125800 Sobic004G125800 Sobic009G200200--Sobic004G125800 Sobic001G018000 Sobic001G018000 Sobic009G200200--Sobic001G018000 Sobic003G175800 Sobic003G175800 Sobic009G200200--Sobic003G175800 Sobic001G411100 Sobic001G411100 Sobic001G104700--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G104700--Sobic002G030900 Sobic001G104600 Sobic001G104600 Sobic001G104700--Sobic001G104600 Sobic003G103300 Sobic003G103300 Sobic001G104700--Sobic003G103300 Sobic001G104700--Sobic001G018000 Sobic010G101000 Sobic010G101000 Sobic001G104700--Sobic010G101000 Sobic001G104700--Sobic004G125800 Sobic004G268400 Sobic004G268400 Sobic001G104700--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic001G104700--Sobic004G267700 Sobic001G434000 Sobic001G434000 Sobic006G020300--Sobic001G434000 Sobic006G020300--Sobic005G002400 Sobic002G052100 Sobic002G052100 Sobic006G020300--Sobic002G052100 Sobic003G154400 Sobic003G154400 Sobic006G020300--Sobic003G154400 Sobic006G020300--Sobic003G175800 Sobic003G326000 Sobic003G326000 Sobic006G020300--Sobic003G326000 Sobic004G214800 Sobic004G214800 Sobic006G020300--Sobic004G214800 Sobic010G104700 Sobic010G104700 Sobic006G020300--Sobic010G104700 Sobic001G181100 Sobic001G181100 Sobic006G020300--Sobic001G181100 Sobic005G002400--Sobic008G002400 Sobic005G002400--Sobic003G326000 Sobic001G112900 Sobic001G112900 Sobic005G002400--Sobic001G112900 Sobic005G002400--Sobic001G181100 Sobic005G002400--Sobic002G052100 Sobic004G190100 Sobic004G190100 Sobic005G002400--Sobic004G190100 Sobic010G271800 Sobic010G271800 Sobic005G002400--Sobic010G271800 Sobic005G002400--Sobic006G020300 Sobic005G002400--Sobic003G154400 Sobic003G428600 Sobic003G428600 Sobic003G426900--Sobic003G428600 Sobic002G351200 Sobic002G351200 Sobic003G426900--Sobic002G351200 Sobic002G213400 Sobic002G213400 Sobic003G426900--Sobic002G213400 Sobic003G426900--Sobic001G018000 Sobic007G010800 Sobic007G010800 Sobic003G426900--Sobic007G010800 Sobic003G426900--Sobic010G101000 Sobic003G426900--Sobic001G112900 Sobic010G113200 Sobic010G113200 Sobic003G426900--Sobic010G113200 Sobic003G304300 Sobic003G304300 Sobic003G426900--Sobic003G304300 Sobic008G002400--Sobic005G002400 Sobic008G002400--Sobic003G326000 Sobic008G002400--Sobic001G181100 Sobic008G002400--Sobic010G271800 Sobic008G002400--Sobic006G020300 Sobic008G002400--Sobic001G112900 Sobic007G016600 Sobic007G016600 Sobic008G002400--Sobic007G016600 Sobic008G002400--Sobic004G190100 Sobic008G002400--Sobic010G113200 Sobic001G309900--Sobic006G020300 Sobic001G309900--Sobic003G175800 Sobic001G309900--Sobic010G101000 Sobic001G309900--Sobic001G018000 Sobic001G309900--Sobic002G030900 Sobic001G309900--Sobic001G104700 Sobic001G309900--Sobic004G267700 Sobic008G088821 Sobic008G088821 Sobic001G309900--Sobic008G088821 Sobic009G225600 Sobic009G225600 Sobic001G309900--Sobic009G225600 Sobic004G125800--Sobic001G018000 Sobic004G125800--Sobic001G104700 Sobic004G125800--Sobic002G030900 Sobic004G125800--Sobic010G101000 Sobic004G125800--Sobic009G225600 Sobic007G124500 Sobic007G124500 Sobic004G125800--Sobic007G124500 Sobic004G125800--Sobic001G411100 Sobic004G125800--Sobic002G351200 Sobic001G046000 Sobic001G046000 Sobic004G125800--Sobic001G046000 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G018000--Sobic001G411100 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic003G186800 Sobic003G186800 Sobic001G018000--Sobic003G186800 Sobic003G175800--Sobic002G052100 Sobic003G175800--Sobic006G020300 Sobic003G175800--Sobic001G181100 Sobic003G175800--Sobic005G002400 Sobic003G175800--Sobic003G154400 Sobic002G052000 Sobic002G052000 Sobic003G175800--Sobic002G052000 Sobic003G175800--Sobic008G002400 Sobic001G181000 Sobic001G181000 Sobic003G175800--Sobic001G181000 Sobic003G175800--Sobic004G214800
Octagon: transcription factors


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