Gene annotation
Transcriptome id Sobic.009G240700.1
Synonym Sb09g029240, mMDH1
Functional annotation - (PubMedID : 26976818)
lactate/malate dehydrogenase, putative, expressed
UniProt C5YW21
Pfam PF01073 PF02866
Panther DB PTHR11540
NCBI CDD -
KEGG Orthology K00026; malate dehydrogenase
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0006694steroid biosynthetic process GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT1G53240 : Lactate/malate dehydrogenase family protein
RAP-DB (Rice) LOC_Os01g46070.1 : lactate/malate dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a036673 , Zm00025a028236 , Zm00025a044656
Brachypodium KQK04752 , KQK08974
Barley HORVU3Hr1G058460.6 , HORVU3Hr1G058460.7 , HORVU3Hr1G058460.4 , HORVU3Hr1G058460.5 , HORVU3Hr1G058460.2 , HORVU3Hr1G058460.3 , HORVU3Hr1G058460.1 , HORVU3Hr1G058460.8 , HORVU1Hr1G090710.8 , HORVU1Hr1G090710.9 , HORVU1Hr1G090710.2 , HORVU1Hr1G090710.3 , HORVU1Hr1G090710.1 , HORVU1Hr1G090710.6 , HORVU1Hr1G090710.4 , HORVU1Hr1G090710.5 , HORVU1Hr1G090720.1 , HORVU1Hr1G090710.18 , HORVU1Hr1G090710.19 , HORVU1Hr1G090710.10 , HORVU1Hr1G090710.11 , HORVU1Hr1G090710.12 , HORVU1Hr1G090710.13 , HORVU1Hr1G090710.14 , HORVU1Hr1G090710.15 , HORVU1Hr1G090710.16 , HORVU1Hr1G090710.17
Wheat TraesCS3D02G236200 , TraesCS3A02G234800 , TraesCS3A02G234800 , TraesCS3A02G234800 , TraesCS1D02G420500 , TraesCS1A02G412900 , TraesCS1A02G412900 , TraesCS1B02G443200 , TraesCS3B02G265000
Populus PNT58876 , PNT58875 , PNT12630 , PNT12629


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cDNA sequences
Sobic.009G240700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
2 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
3 Sobic.003G238500 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
4 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
5 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
6 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
7 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
8 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
9 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
10 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
11 Sobic.002G308300 expressed protein -
12 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
13 Sobic.008G051800 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
14 Sobic.002G410700 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
15 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
16 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
17 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
18 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
19 Sobic.007G159700 expressed protein K02138: ATPeF0D, ATP5H, F-type H+-transporting ATPase subunit d
20 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -


Gene co-expression network
sample Sobic009G240700 Sobic009G240700 Sobic003G170300 Sobic003G170300 Sobic009G240700--Sobic003G170300 Sobic004G155100 Sobic004G155100 Sobic009G240700--Sobic004G155100 Sobic003G238500 Sobic003G238500 Sobic009G240700--Sobic003G238500 Sobic001G473400 Sobic001G473400 Sobic009G240700--Sobic001G473400 Sobic002G395000 Sobic002G395000 Sobic009G240700--Sobic002G395000 Sobic002G078300 Sobic002G078300 Sobic009G240700--Sobic002G078300 Sobic001G286200 Sobic001G286200 Sobic009G240700--Sobic001G286200 Sobic010G264300 Sobic010G264300 Sobic009G240700--Sobic010G264300 Sobic001G282500 Sobic001G282500 Sobic009G240700--Sobic001G282500 Sobic003G170300--Sobic009G240700 Sobic008G150300 Sobic008G150300 Sobic003G170300--Sobic008G150300 Sobic003G170300--Sobic001G473400 Sobic003G170300--Sobic004G155100 Sobic004G282700 Sobic004G282700 Sobic003G170300--Sobic004G282700 Sobic002G180300 Sobic002G180300 Sobic003G170300--Sobic002G180300 Sobic002G308300 Sobic002G308300 Sobic003G170300--Sobic002G308300 Sobic003G170300--Sobic001G282500 Sobic003G170300--Sobic010G264300 Sobic003G135600 Sobic003G135600 Sobic004G155100--Sobic003G135600 Sobic002G309700 Sobic002G309700 Sobic004G155100--Sobic002G309700 Sobic004G155100--Sobic002G395000 Sobic009G224400 Sobic009G224400 Sobic004G155100--Sobic009G224400 Sobic004G260200 Sobic004G260200 Sobic004G155100--Sobic004G260200 Sobic001G073600 Sobic001G073600 Sobic004G155100--Sobic001G073600 Sobic004G155100--Sobic009G240700 Sobic001G206700 Sobic001G206700 Sobic004G155100--Sobic001G206700 Sobic004G155100--Sobic002G180300 Sobic003G238500--Sobic002G395000 Sobic003G322300 Sobic003G322300 Sobic003G238500--Sobic003G322300 Sobic003G238500--Sobic004G260200 Sobic004G294900 Sobic004G294900 Sobic003G238500--Sobic004G294900 Sobic003G238500--Sobic004G155100 Sobic003G238500--Sobic009G240700 Sobic006G203900 Sobic006G203900 Sobic003G238500--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic003G238500--Sobic008G084100 Sobic003G238500--Sobic001G073600 Sobic010G258000 Sobic010G258000 Sobic001G473400--Sobic010G258000 Sobic001G473400--Sobic003G170300 Sobic009G016500 Sobic009G016500 Sobic001G473400--Sobic009G016500 Sobic001G473400--Sobic009G240700 Sobic003G388700 Sobic003G388700 Sobic001G473400--Sobic003G388700 Sobic006G020900 Sobic006G020900 Sobic001G473400--Sobic006G020900 Sobic001G473400--Sobic001G282500 Sobic001G473400--Sobic002G395000 Sobic001G473400--Sobic002G308300 Sobic002G395000--Sobic004G260200 Sobic002G395000--Sobic003G135600 Sobic002G395000--Sobic009G224400 Sobic002G395000--Sobic003G238500 Sobic002G395000--Sobic002G309700 Sobic002G395000--Sobic001G073600 Sobic002G395000--Sobic004G155100 Sobic007G023400 Sobic007G023400 Sobic002G395000--Sobic007G023400 Sobic002G395000--Sobic002G078300 Sobic002G078300--Sobic001G286200 Sobic002G078300--Sobic010G264300 Sobic002G078300--Sobic004G260200 Sobic002G078300--Sobic002G395000 Sobic002G078300--Sobic002G309700 Sobic007G211500 Sobic007G211500 Sobic002G078300--Sobic007G211500 Sobic002G356400 Sobic002G356400 Sobic002G078300--Sobic002G356400 Sobic001G370700 Sobic001G370700 Sobic002G078300--Sobic001G370700 Sobic002G078300--Sobic002G308300 Sobic001G286200--Sobic002G078300 Sobic001G286200--Sobic010G264300 Sobic001G304400 Sobic001G304400 Sobic001G286200--Sobic001G304400 Sobic001G286200--Sobic007G211500 Sobic002G296200 Sobic002G296200 Sobic001G286200--Sobic002G296200 Sobic007G134900 Sobic007G134900 Sobic001G286200--Sobic007G134900 Sobic009G212200 Sobic009G212200 Sobic001G286200--Sobic009G212200 Sobic001G286200--Sobic002G308300 Sobic002G263100 Sobic002G263100 Sobic001G286200--Sobic002G263100 Sobic010G264300--Sobic001G286200 Sobic010G264300--Sobic002G078300 Sobic010G264300--Sobic002G308300 Sobic001G519000 Sobic001G519000 Sobic010G264300--Sobic001G519000 Sobic010G264300--Sobic002G356400 Sobic010G264300--Sobic009G212200 Sobic010G264300--Sobic001G370700 Sobic010G264300--Sobic001G304400 Sobic010G264300--Sobic002G180300 Sobic001G282500--Sobic002G309700 Sobic009G215300 Sobic009G215300 Sobic001G282500--Sobic009G215300 Sobic001G282500--Sobic004G260200 Sobic001G282500--Sobic002G356400 Sobic001G282500--Sobic002G395000 Sobic001G282500--Sobic002G308300 Sobic001G181500 Sobic001G181500 Sobic001G282500--Sobic001G181500 Sobic001G282500--Sobic003G135600 Sobic001G350600 Sobic001G350600 Sobic001G282500--Sobic001G350600
Octagon: transcription factors


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